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Lj5g3v2241100.1

Overview

Field Value
Gene ID Lj5g3v2241100
Transcript ID Lj5g3v2241100.1
Lotus japonicus genome version MG20 v3.0
Description Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27000
1 660 660 0 –
Phobius
NON_CYTOPLASMIC_DOMAIN
1 329 329 – –
PANTHER
PTHR27000:SF143
1 660 660 0 –
Gene3D
G3DSA:3.80.10.10
2 126 125 3.80E-25
IPR032675
SMART
SM00369
4 28 25 40
IPR003591
SUPERFAMILY
SSF52058
51 307 257 1.12E-57
IPR032675
SMART
SM00369
125 148 24 280
IPR003591
Gene3D
G3DSA:3.80.10.10
127 317 191 6.20E-51
IPR032675
SMART
SM00369
196 220 25 390
IPR003591
Pfam
PF13855
223 281 59 2.30E-10
IPR001611
SMART
SM00369
244 267 24 3.6
IPR003591
SMART
SM00369
268 291 24 45
IPR003591
Gene3D
G3DSA:2.60.120.200
318 409 92 1.60E-06
IPR013320
Phobius
TRANSMEMBRANE
330 351 22 – –
Phobius
CYTOPLASMIC_DOMAIN
352 660 309 – –
SUPERFAMILY
SSF56112
375 660 286 7.86E-68
IPR011009
ProSiteProfiles
PS50011
396 660 265 34.676
IPR000719
Pfam
PF00069
398 660 263 3.10E-42
IPR000719
ProSitePatterns
PS00107
402 425 24 –
IPR017441
Gene3D
G3DSA:3.30.200.20
410 461 52 1.90E-18 –
Gene3D
G3DSA:1.10.510.10
462 659 198 1.80E-41 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj5g3v2241100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2241100.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.