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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0521540 |
| Transcript ID | Lj6g3v0521540.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Serine/threonine protein kinase-like protein CCR4 [Medicago truncatula] gi|357461261|ref|XP_003600912.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 29 | 29 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 11 | 23 | 13 | – | – | |
| Phobius | 24 | 29 | 6 | – | – | |
| SUPERFAMILY | 29 | 262 | 234 | 2.53E-18 | ||
| Phobius | 30 | 389 | 360 | – | – | |
| Gene3D | 67 | 303 | 237 | 1.80E-08 | ||
| Gene3D | 357 | 505 | 149 | 8.80E-09 | ||
| MobiDBLite | 358 | 383 | 26 | – | – | |
| Phobius | 390 | 413 | 24 | – | – | |
| TMHMM | 391 | 413 | 23 | – | – | |
| PANTHER | 392 | 436 | 45 | 6.60E-257 | – | |
| PANTHER | 392 | 436 | 45 | 6.60E-257 | – | |
| Phobius | 414 | 807 | 394 | – | – | |
| MobiDBLite | 430 | 481 | 52 | – | – | |
| PANTHER | 455 | 807 | 353 | 6.60E-257 | – | |
| PANTHER | 455 | 807 | 353 | 6.60E-257 | – | |
| SUPERFAMILY | 477 | 782 | 306 | 3.51E-72 | ||
| ProSiteProfiles | 497 | 788 | 292 | 37.022 | ||
| SMART | 497 | 787 | 291 | 9.70E-27 | ||
| Pfam | 498 | 779 | 282 | 2.80E-45 | ||
| ProSitePatterns | 503 | 525 | 23 | – | ||
| CDD | 503 | 784 | 282 | 1.10E-93 | – | |
| Gene3D | 506 | 566 | 61 | 1.30E-23 | – | |
| Gene3D | 567 | 780 | 214 | 1.20E-36 | – | |
| ProSitePatterns | 628 | 640 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v0521540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0521540.1, powered by CORGI.
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