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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1088810 |
| Transcript ID | Lj6g3v1088810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 386 | 386 | 3.60E-218 | – | |
| PANTHER | 1 | 386 | 386 | 3.60E-218 | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 6 | 18 | 13 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 509 | 486 | – | – | |
| Gene3D | 29 | 290 | 262 | 5.80E-65 | ||
| Pfam | 29 | 71 | 43 | 1.00E-06 | ||
| SUPERFAMILY | 79 | 401 | 323 | 4.79E-63 | – | |
| SMART | 99 | 123 | 25 | 70 | ||
| Pfam | 125 | 146 | 22 | 1.3 | ||
| SMART | 195 | 219 | 25 | 37 | ||
| SMART | 267 | 291 | 25 | 46 | ||
| Gene3D | 292 | 501 | 210 | 5.80E-42 | ||
| Pfam | 294 | 351 | 58 | 1.10E-06 | ||
| SMART | 339 | 363 | 25 | 100 | ||
| SUPERFAMILY | 366 | 502 | 137 | 3.06E-21 | ||
| PANTHER | 410 | 503 | 94 | 3.60E-218 | – | |
| PANTHER | 410 | 503 | 94 | 3.60E-218 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1088810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1088810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.