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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1370740 |
| Transcript ID | Lj6g3v1370740.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase [Medicago truncatula] gi|357449319|ref|XP_003594936.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 11 | 19 | 9 | – | – | |
| TMHMM | 12 | 31 | 20 | – | – | |
| Phobius | 20 | 27 | 8 | – | – | |
| Phobius | 28 | 50 | 23 | – | – | |
| Gene3D | 49 | 130 | 82 | 2.10E-06 | ||
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 51 | 73 | 23 | – | – | |
| PANTHER | 56 | 438 | 383 | 1.20E-239 | – | |
| PANTHER | 56 | 438 | 383 | 1.20E-239 | – | |
| Phobius | 74 | 452 | 379 | – | – | |
| SUPERFAMILY | 106 | 394 | 289 | 9.98E-77 | ||
| SMART | 122 | 393 | 272 | 2.50E-30 | ||
| ProSiteProfiles | 122 | 407 | 286 | 37.842 | ||
| Pfam | 126 | 393 | 268 | 1.10E-47 | ||
| TMHMM | 127 | 149 | 23 | – | – | |
| ProSitePatterns | 128 | 150 | 23 | – | ||
| Gene3D | 131 | 186 | 56 | 2.60E-24 | – | |
| Gene3D | 187 | 391 | 205 | 2.60E-42 | – | |
| ProSitePatterns | 243 | 255 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1370740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1370740.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.