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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1984520 |
| Transcript ID | Lj6g3v1984520.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780-like [Glycine max] gi|356549178|ref|XP_003542974.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 6 | 16 | 11 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| PANTHER | 13 | 603 | 591 | 0 | – | |
| PANTHER | 13 | 603 | 591 | 0 | – | |
| Phobius | 17 | 25 | 9 | – | – | |
| Phobius | 26 | 237 | 212 | – | – | |
| Pfam | 36 | 75 | 40 | 7.20E-09 | ||
| Gene3D | 38 | 209 | 172 | 9.40E-38 | ||
| SUPERFAMILY | 38 | 209 | 172 | 1.56E-35 | ||
| TMHMM | 79 | 101 | 23 | – | – | |
| ProSiteProfiles | 103 | 125 | 23 | 5.625 | ||
| ProSiteProfiles | 127 | 149 | 23 | 7.281 | ||
| ProSiteProfiles | 151 | 173 | 23 | 5.587 | ||
| ProSiteProfiles | 175 | 196 | 22 | 5.055 | ||
| Gene3D | 225 | 311 | 87 | 9.00E-13 | ||
| Phobius | 238 | 259 | 22 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 260 | 620 | 361 | – | – | |
| SUPERFAMILY | 279 | 571 | 293 | 1.46E-75 | ||
| ProSiteProfiles | 298 | 574 | 277 | 35.453 | ||
| SMART | 298 | 569 | 272 | 7.60E-30 | ||
| Pfam | 300 | 568 | 269 | 2.40E-43 | ||
| ProSitePatterns | 304 | 326 | 23 | – | ||
| Gene3D | 312 | 375 | 64 | 1.30E-21 | – | |
| Gene3D | 376 | 570 | 195 | 6.40E-40 | – | |
| ProSitePatterns | 420 | 432 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1984520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1984520.1, powered by CORGI.
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