Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0036000 |
| Transcript ID | LotjaGi1g1v0036000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|G7KHF1|G7KHF1_MEDTR Receptor-like protein; Found in the gene: LotjaGi1g1v0036000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:5037982..5041321) extracted from Lotus japonicus Gifu genome v1.2.
CATGAATTGTTTCCATACAAAATTCATTCTCTAGTTTCCTACCATCGAAAGAAGAATATCAAGAGCAGAGTTTAACTTCC TAAACAGTGAAAATAGCTTCTTCTATTTTCCACATGGGGTGGATTCCTTTACCATATTTTATCTTCCACTCGTTCTTGTT GCTTCTTCTTCATTTTCCTTCATACACTTGCTCACTGTGCAACTATCATGACAACTCTGCTTTGCTTCAATTCAAAAACT CATTTGTTGTCAACACTTCAGCTGATAATTTTATGGTTAGGACTCATTGTTCCTCTTTTTCCACTAAGACAGAAACTTGG AAAAACGGAACAGATTGCTGCAGCAAGTGGGATGGGGTCACGTGCGACGCCTTATCAGGCCACGTGATTGGTCTCGACCT TAGTTGTGGTCATCTTCATGGTGAGTTCCAACCCAATAGCACCATATTCCAGCTGAGGCACCTTCAACAACTCAACCTTG CTTTTAATCATTTTTGGAGATCTCCGTTGTATCCTGGAATTGGTGATCTCGTAGAACTCACCCATCTGAATTTATCATAC TCTGGAATCATTGGTAATATTCCCTCTACAATCTCTCACTTGTCAGAACTAGTATCACTTGATCTAAGCAACTCGTATAT GAGATTTGATCCATCCACGTGGAAGAAACTCATTCTTAACACAACTAATTTAAGGGAGCTCCATCTTGATGGCACAGACA TGTCTTCTGTCAGAGTGAGCTCTTTGATGAATTTGTCATCCTCTTTGGTCTCTCTCCATCTACAATACACTGGATTACAG GGGAATTTTCCAAGTGACATCTTTTGTTTACCCAATCTTGAAGAACTTGATTTGTCATTAAATGATCAGTTGATGGGTCA GATTCCAAAGTCCAACTGCAGCACTCCTCTAAGGTACTTGGATCTCTCTAGCACATCATTCTCAGGAGAAATTCCAGATT CCATAGGCCATTTGAAATCTCTTGAAATACTTGATCTGCACAGCAGCAAATTCAATGGAGTGGTTCCTCTATCTTTGTGG AACCTCACTCGACTAACAAGTTTGAGCCTCTCCTACAATCACTTTCGCGGTGAAATCCCACCATTGCTTTCAAACCTCAA ACATCTCACTAACTTTGAGATTAGGTACAATAATTTTAGCGGTTGCATCCCTGAACAGCTCGGTGAGCTTCTCAAATTAG AATTTCTTCAACTTTCAATGAACAACCTAAGAGGTCCGATTCCAAGTAAAATGGCTGGACTTCCAAAACTAGAATTTCTA GATTTGTCAAGTAATATGTTAACTGGAACAATTCCTCATTGGTGTTATTCTTTACCTTTCTTGTCAAGTTTGGATCTTAG TAACAACCATCTCATGGGGAAAATTGGTGAATTCTCAACTTATGCTTTGGAAGATTTGAATCTCTCTAACAACAAACTGC AAGGTCAGATTCCACACTCAGTATTTGAATTTGAAAATCTTACTGACTTAGATTTTTCATCAAATGACCTGAGTGTTTAT GTGGACTTCCACCAATTCTCAAAGCTTAAAAGTCTAACTTCCCTCAATCTTTCTCAAATTAATTTTCTCGCAATTAGCTT TGATAGCACTAATGACTATGAGTTACCCAACCTTCAATCCTTATATCTATCTTCATGTAATATTGAGAGCAGTTTCCCTA AATTCTTAGCACCACTTCAAAATTTGGAAGAATTAGATCTTTCTAATAACAAAATTCATGGACAAATTCCCAAATGGTTT CATGAGAAGCTCTTACACTCATGGAAGAACATTGAATATATTGATCTCAGTTTCAACCAGTTGCAAGGCGACCTTCCAAT TCCTCCAAAGAGCATCTACAACTTTCTTGTCTCAAATAACCACTTCACCGGATACATTGATTCAATGATTTGCAATGCAA GCTCCCTCATTGTGCTCAATTTGGCTCACAACAACTTGACTGGCACAATTCCACAGTGCTTGGGGACATTTTATGATCTT GTGGTGTTGGATTTGCAAATGAACAACCTTCATGGAAGCATCCCTATAAATTTTTCTGAGGGAAATGTCTTTGAGACAAT AAAGTTGAATGACAATCGATTGGAGGGACCATTACCACAGGCCTTGGCCAAGTGCACAAAACTTGAAGTTTTGGACCTTG GAGACAACAACATAGAAGATTCATTTCCTAGTTGGCTAGAAACTCTGCAAGAGTTACAAGTACTCCGTTTACGGTCAAAC AAATTCCGCGGTATCATCACTTGTTCCAACACAAAGCATCCATTTCCCAAGTTGAGAATTATTGATGTCGCCAATAACAA TTTTAGTGGCTCCTTGCCCGCATTATGCTTTATGAAATTTCAAGGAATGATGAATGTGAGTAATAACCCAAACCGTTCCC TGTACATGAACGACAAAGGTTACTACAAAGATTCAGTGGTGATCATAATGAAAGGTCAAGAAGTGGAGCTTAAGAGGATA TTAACTGCTTTCACAACTATTGATTTATCAAACAATATGTTTGAAGGTTGCATTCCAAAAGTCATTGGACGATTAAAGTC TCTTATAGGACTTAACCTTTCACACAATAGAATCAATGGTGTCATTCCACATTCATTGAGTAATTTGACAAATTTGGAAT GGTTGGACCTCTCATGGAACCAGTTGACTAGTGACATTCCTTTGGCTTTGACAAATTTGAATTTTCTCTCTACCTTGAAC CTTTCACAAAACCATCTTGAGGGAATCATACCTACTGGTGGACAATTTAACACATATGGAAATGCTTCATATGGAGGAAA CCCAATGCTATGTGGATTCCCTTTGTCAAAATCATGCAATAAGGATGAAGAACAGCCACCACATTCAACATTTCAAGATG ATGAAGAATCTGGATTTGGTTGGAAATCTGTGGCCGTGGGATATGCGTGTGGGGCTGTGTTTGGGATGCTCTTGGGATAT AATTTATTCTTGACTACGAAACCTCAATGGCTTGCGACACTTGTTGAAGGTCTGCTTGGTGTAAGGGTGAAAAGGACAAA CAACAGAGCCCGTACAAACCGCAGATGAATGAATTAGTTCAATATGGGTCTGTTTGGTACATTATTGCAGTTGTTTGTAA CTTCTCTGTGTGACAAATTTATTCTTATATCTCTCTAATATACTAAGAGATCTATTTCATGTAGTCATGCAAATAAAATA AAATATTGTGATCAATTCCTTGAGTTTTCATGTCTGAGTGAATTTGGTACATGAAAGTATTTATGAGAGAATGTGCCCAA AAATAAGGGGAGAAATTGATATTGACATTTCAGAAATCCTATGAATCTATCATATCATTT
CDS sequence (LotjaGi1g1v0036000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTGGATTCCTTTACCATATTTTATCTTCCACTCGTTCTTGTTGCTTCTTCTTCATTTTCCTTCATACACTTGCTC ACTGTGCAACTATCATGACAACTCTGCTTTGCTTCAATTCAAAAACTCATTTGTTGTCAACACTTCAGCTGATAATTTTA TGGTTAGGACTCATTGTTCCTCTTTTTCCACTAAGACAGAAACTTGGAAAAACGGAACAGATTGCTGCAGCAAGTGGGAT GGGGTCACGTGCGACGCCTTATCAGGCCACGTGATTGGTCTCGACCTTAGTTGTGGTCATCTTCATGGTGAGTTCCAACC CAATAGCACCATATTCCAGCTGAGGCACCTTCAACAACTCAACCTTGCTTTTAATCATTTTTGGAGATCTCCGTTGTATC CTGGAATTGGTGATCTCGTAGAACTCACCCATCTGAATTTATCATACTCTGGAATCATTGGTAATATTCCCTCTACAATC TCTCACTTGTCAGAACTAGTATCACTTGATCTAAGCAACTCGTATATGAGATTTGATCCATCCACGTGGAAGAAACTCAT TCTTAACACAACTAATTTAAGGGAGCTCCATCTTGATGGCACAGACATGTCTTCTGTCAGAGTGAGCTCTTTGATGAATT TGTCATCCTCTTTGGTCTCTCTCCATCTACAATACACTGGATTACAGGGGAATTTTCCAAGTGACATCTTTTGTTTACCC AATCTTGAAGAACTTGATTTGTCATTAAATGATCAGTTGATGGGTCAGATTCCAAAGTCCAACTGCAGCACTCCTCTAAG GTACTTGGATCTCTCTAGCACATCATTCTCAGGAGAAATTCCAGATTCCATAGGCCATTTGAAATCTCTTGAAATACTTG ATCTGCACAGCAGCAAATTCAATGGAGTGGTTCCTCTATCTTTGTGGAACCTCACTCGACTAACAAGTTTGAGCCTCTCC TACAATCACTTTCGCGGTGAAATCCCACCATTGCTTTCAAACCTCAAACATCTCACTAACTTTGAGATTAGGTACAATAA TTTTAGCGGTTGCATCCCTGAACAGCTCGGTGAGCTTCTCAAATTAGAATTTCTTCAACTTTCAATGAACAACCTAAGAG GTCCGATTCCAAGTAAAATGGCTGGACTTCCAAAACTAGAATTTCTAGATTTGTCAAGTAATATGTTAACTGGAACAATT CCTCATTGGTGTTATTCTTTACCTTTCTTGTCAAGTTTGGATCTTAGTAACAACCATCTCATGGGGAAAATTGGTGAATT CTCAACTTATGCTTTGGAAGATTTGAATCTCTCTAACAACAAACTGCAAGGTCAGATTCCACACTCAGTATTTGAATTTG AAAATCTTACTGACTTAGATTTTTCATCAAATGACCTGAGTGTTTATGTGGACTTCCACCAATTCTCAAAGCTTAAAAGT CTAACTTCCCTCAATCTTTCTCAAATTAATTTTCTCGCAATTAGCTTTGATAGCACTAATGACTATGAGTTACCCAACCT TCAATCCTTATATCTATCTTCATGTAATATTGAGAGCAGTTTCCCTAAATTCTTAGCACCACTTCAAAATTTGGAAGAAT TAGATCTTTCTAATAACAAAATTCATGGACAAATTCCCAAATGGTTTCATGAGAAGCTCTTACACTCATGGAAGAACATT GAATATATTGATCTCAGTTTCAACCAGTTGCAAGGCGACCTTCCAATTCCTCCAAAGAGCATCTACAACTTTCTTGTCTC AAATAACCACTTCACCGGATACATTGATTCAATGATTTGCAATGCAAGCTCCCTCATTGTGCTCAATTTGGCTCACAACA ACTTGACTGGCACAATTCCACAGTGCTTGGGGACATTTTATGATCTTGTGGTGTTGGATTTGCAAATGAACAACCTTCAT GGAAGCATCCCTATAAATTTTTCTGAGGGAAATGTCTTTGAGACAATAAAGTTGAATGACAATCGATTGGAGGGACCATT ACCACAGGCCTTGGCCAAGTGCACAAAACTTGAAGTTTTGGACCTTGGAGACAACAACATAGAAGATTCATTTCCTAGTT GGCTAGAAACTCTGCAAGAGTTACAAGTACTCCGTTTACGGTCAAACAAATTCCGCGGTATCATCACTTGTTCCAACACA AAGCATCCATTTCCCAAGTTGAGAATTATTGATGTCGCCAATAACAATTTTAGTGGCTCCTTGCCCGCATTATGCTTTAT GAAATTTCAAGGAATGATGAATGTGAGTAATAACCCAAACCGTTCCCTGTACATGAACGACAAAGGTTACTACAAAGATT CAGTGGTGATCATAATGAAAGGTCAAGAAGTGGAGCTTAAGAGGATATTAACTGCTTTCACAACTATTGATTTATCAAAC AATATGTTTGAAGGTTGCATTCCAAAAGTCATTGGACGATTAAAGTCTCTTATAGGACTTAACCTTTCACACAATAGAAT CAATGGTGTCATTCCACATTCATTGAGTAATTTGACAAATTTGGAATGGTTGGACCTCTCATGGAACCAGTTGACTAGTG ACATTCCTTTGGCTTTGACAAATTTGAATTTTCTCTCTACCTTGAACCTTTCACAAAACCATCTTGAGGGAATCATACCT ACTGGTGGACAATTTAACACATATGGAAATGCTTCATATGGAGGAAACCCAATGCTATGTGGATTCCCTTTGTCAAAATC ATGCAATAAGGATGAAGAACAGCCACCACATTCAACATTTCAAGATGATGAAGAATCTGGATTTGGTTGGAAATCTGTGG CCGTGGGATATGCGTGTGGGGCTGTGTTTGGGATGCTCTTGGGATATAATTTATTCTTGACTACGAAACCTCAATGGCTT GCGACACTTGTTGAAGGTCTGCTTGGTGTAAGGGTGAAAAGGACAAACAACAGAGCCCGTACAAACCGCAGATGA
Protein sequence (LotjaGi1g1v0036000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGWIPLPYFIFHSFLLLLLHFPSYTCSLCNYHDNSALLQFKNSFVVNTSADNFMVRTHCSSFSTKTETWKNGTDCCSKWD GVTCDALSGHVIGLDLSCGHLHGEFQPNSTIFQLRHLQQLNLAFNHFWRSPLYPGIGDLVELTHLNLSYSGIIGNIPSTI SHLSELVSLDLSNSYMRFDPSTWKKLILNTTNLRELHLDGTDMSSVRVSSLMNLSSSLVSLHLQYTGLQGNFPSDIFCLP NLEELDLSLNDQLMGQIPKSNCSTPLRYLDLSSTSFSGEIPDSIGHLKSLEILDLHSSKFNGVVPLSLWNLTRLTSLSLS YNHFRGEIPPLLSNLKHLTNFEIRYNNFSGCIPEQLGELLKLEFLQLSMNNLRGPIPSKMAGLPKLEFLDLSSNMLTGTI PHWCYSLPFLSSLDLSNNHLMGKIGEFSTYALEDLNLSNNKLQGQIPHSVFEFENLTDLDFSSNDLSVYVDFHQFSKLKS LTSLNLSQINFLAISFDSTNDYELPNLQSLYLSSCNIESSFPKFLAPLQNLEELDLSNNKIHGQIPKWFHEKLLHSWKNI EYIDLSFNQLQGDLPIPPKSIYNFLVSNNHFTGYIDSMICNASSLIVLNLAHNNLTGTIPQCLGTFYDLVVLDLQMNNLH GSIPINFSEGNVFETIKLNDNRLEGPLPQALAKCTKLEVLDLGDNNIEDSFPSWLETLQELQVLRLRSNKFRGIITCSNT KHPFPKLRIIDVANNNFSGSLPALCFMKFQGMMNVSNNPNRSLYMNDKGYYKDSVVIIMKGQEVELKRILTAFTTIDLSN NMFEGCIPKVIGRLKSLIGLNLSHNRINGVIPHSLSNLTNLEWLDLSWNQLTSDIPLALTNLNFLSTLNLSQNHLEGIIP TGGQFNTYGNASYGGNPMLCGFPLSKSCNKDEEQPPHSTFQDDEESGFGWKSVAVGYACGAVFGMLLGYNLFLTTKPQWL ATLVEGLLGVRVKRTNNRARTNRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 9 | 19 | 11 | - | – | |
| PANTHER | 19 | 236 | 218 | 4.1E-177 | – | |
| PANTHER | 19 | 236 | 218 | 4.1E-177 | – | |
| Phobius | 20 | 27 | 8 | - | – | |
| Gene3D | 27 | 262 | 236 | 4.1E-47 | ||
| Phobius | 28 | 933 | 906 | - | – | |
| Pfam | 32 | 85 | 54 | 1.0E-8 | ||
| SUPERFAMILY | 61 | 305 | 245 | 1.13E-37 | – | |
| SMART | 114 | 139 | 26 | 27.0 | ||
| ProSiteProfiles | 116 | 137 | 22 | 4.763 | ||
| ProSiteProfiles | 141 | 163 | 23 | 4.84 | ||
| ProSiteProfiles | 192 | 213 | 22 | 4.77 | ||
| SUPERFAMILY | 215 | 575 | 361 | 1.19E-59 | – | |
| ProSiteProfiles | 241 | 264 | 24 | 5.155 | ||
| Gene3D | 263 | 329 | 67 | 5.7E-19 | ||
| PANTHER | 264 | 339 | 76 | 4.1E-177 | – | |
| PANTHER | 264 | 339 | 76 | 4.1E-177 | – | |
| ProSiteProfiles | 265 | 287 | 23 | 4.647 | ||
| Pfam | 266 | 324 | 59 | 1.7E-8 | ||
| SMART | 287 | 310 | 24 | 140.0 | ||
| ProSiteProfiles | 289 | 310 | 22 | 4.847 | ||
| SMART | 311 | 335 | 25 | 39.0 | ||
| SMART | 311 | 337 | 27 | 210.0 | – | |
| ProSiteProfiles | 313 | 335 | 23 | 6.441 | ||
| Gene3D | 330 | 429 | 100 | 1.6E-30 | ||
| PANTHER | 346 | 428 | 83 | 4.1E-177 | – | |
| PANTHER | 346 | 428 | 83 | 4.1E-177 | – | |
| ProSiteProfiles | 361 | 384 | 24 | 4.701 | ||
| Pfam | 381 | 420 | 40 | 3.2E-7 | ||
| SMART | 383 | 407 | 25 | 23.0 | ||
| ProSiteProfiles | 385 | 407 | 23 | 6.072 | ||
| PRINTS | 386 | 399 | 14 | 5.2E-6 | – | |
| ProSiteProfiles | 409 | 430 | 22 | 5.925 | ||
| SMART | 429 | 453 | 25 | 190.0 | ||
| Gene3D | 430 | 552 | 123 | 1.3E-23 | ||
| ProSiteProfiles | 431 | 453 | 23 | 6.257 | ||
| Pfam | 432 | 488 | 57 | 1.2E-6 | ||
| SMART | 453 | 474 | 22 | 220.0 | – | |
| ProSiteProfiles | 455 | 476 | 22 | 5.348 | ||
| SMART | 504 | 527 | 24 | 51.0 | ||
| Pfam | 505 | 570 | 66 | 9.2E-8 | ||
| ProSiteProfiles | 506 | 529 | 24 | 5.548 | ||
| PANTHER | 511 | 908 | 398 | 4.1E-177 | – | |
| PANTHER | 511 | 908 | 398 | 4.1E-177 | – | |
| PRINTS | 528 | 541 | 14 | 5.2E-6 | – | |
| SMART | 528 | 556 | 29 | 19.0 | ||
| SMART | 528 | 565 | 38 | 4.8 | – | |
| ProSiteProfiles | 530 | 552 | 23 | 7.404 | ||
| ProSiteProfiles | 559 | 581 | 23 | 4.994 | ||
| SUPERFAMILY | 562 | 905 | 344 | 4.42E-59 | – | |
| ProSiteProfiles | 604 | 626 | 23 | 5.44 | ||
| ProSiteProfiles | 628 | 649 | 22 | 4.901 | ||
| Pfam | 655 | 711 | 57 | 3.5E-7 | ||
| SMART | 674 | 703 | 30 | 88.0 | – | |
| ProSiteProfiles | 676 | 699 | 24 | 6.703 | ||
| SMART | 698 | 721 | 24 | 120.0 | ||
| ProSiteProfiles | 700 | 721 | 22 | 5.209 | ||
| SMART | 724 | 748 | 25 | 370.0 | ||
| ProSiteProfiles | 726 | 748 | 23 | 5.871 | ||
| Pfam | 794 | 851 | 58 | 5.8E-12 | ||
| SMART | 814 | 837 | 24 | 47.0 | ||
| ProSiteProfiles | 816 | 839 | 24 | 6.326 | ||
| SMART | 838 | 861 | 24 | 8.9 | ||
| SMART | 838 | 859 | 22 | 27.0 | – | |
| ProSiteProfiles | 840 | 861 | 22 | 7.35 | ||
| SMART | 862 | 885 | 24 | 110.0 | ||
| ProSiteProfiles | 864 | 885 | 22 | 5.879 | ||
| TMHMM | 934 | 953 | 20 | - | – | |
| Phobius | 934 | 953 | 20 | - | – | |
| Phobius | 954 | 984 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0036000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…