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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0056600 |
| Transcript ID | LotjaGi1g1v0056600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7922948..7927381) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTGTTGTTGTTGGTGGCAATTGCATTCGGCAATTCAGATATTGATGCACTCCTTGAACTCAAGAAGAGTTTTCAGGA TGACCCTTTGGGTTTAGTTTTCAATTCTTGGGATTCCAAGTCTTTAGAATCTGATGGGTGTCCTCAGAACTGGTTTGGGA TAATGTGTACTGAAGGCAACATCGTCTCAATCGCTCTAGATAATGCTGGTTTGGTTGGGGAGTTCAATTTCCTTGCTATC AGTGGCCTCACAATGCTTCACAACTTGTCAATTGTGAACAACCAGTTCACAGGAAGTGACTTACAAATTGGTCCGATAAA ATCACTTGAGTTTCTTGATTTGTCCCTCAACAAGTTCAACGGGTCGTTACTCTCTAACTTTGTTGAACTGAATAACTTAG TGTATCTGAATCTTTCTTCAAATGAATTTAGTGGCACTCTTCCTATTGGGCTTCACAAACTTGAGAAGTTGAAATACTTA GATTTGCACAATAATAACTTTTCTGGGGATATCATGCATCTCTTTTCTCAGATGGGTAGTGTGCTACATGTGGACATAAG CAGCAACATGTTTTCAGGTACACCGGATTTGGGACTTGGAGATGACTCCTATGTATCATCAATTCAATATTTGAACATTA GCCACAATTCATTGACTGGTGAGCTATTTGCTCATGATGGCATGCCATACCTTGACAATTTAGAAGTCTTTGATGCTAGT AATAATGAGCTAGTGGGTAACATACCTTCCTTCACCTTTGTGGTATCTCTAAGGATTCTTCGACTCGCATGCAACCAGTT GACAGGGTCATTGCCAGAAACTTTGCTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAACTTG AAGGTACCTTATTTCTGTGTATAATGTGTGAATTGTAATCATATTTTTTTCTTCAAATTTCATTTTACATTTAGGGGCCT ACCACTATATCTAGACTCTGGATGCATTTGTCTGTCTTTTGGTTACATAAATTGATACCTTATTGTGCTACTTTAGTTAT TTTATAGACCCTTAGATGATTTTCTTCTGGGGAATGAATAAGATACTTGTCACTTAAATTTCTTTAGAGATGGACTGTTA TACAGATTTTGAAAGATATTACTATGGTCATTAAGCTGAAATGGAAGTCTATACTTGATTAGCGTAGATTGAGTAAGAAT AAAGAGCATTTCATAAATTTCTTACTTGTATAAAATATTGGAGTACTTTAATTACATAAAAACATAATTTCTCGAATTTA AAGTTCGTGTATTATTGTTCAGCATATTGTTGGAAAAATCATATTTCATACATAACTCTGTCACATGGCTGTCAAGCTCG CGAGTTAACGTACGATTCAGCCTAAGGAAATTGAGTTGAATCGCTCTCAAACTCGGGTAGATGAAATGGGGAAATGACTA AGACAGGATTTCATAAAATCACATATGACATGGGTTCAAAATAAGAATAATTCAATGAGTTTCTGCATACCCTTCTCTTT ATAATATGAGCTTTCTTTGCAGGTCCCATTGGAAGCATTACCTCAGTAACTCTCAGGAAGCTTAATTTATCTTCAAACAT ATTGTCAGGTCCCTTACCTCTTAAGGTAGGCCACTGTGCCATCATAGATTTGAGCAATAACATGCTCTCAGGTAACTTGT CAAGGATTCAGTATTGGGGTAACTATGTGGAAGTTATTCAGCTAAGTACAAACTCACTCACAGGAATGCTGCCAAATGAA ACTTCCCAATTTTTAAGGTTAACTGCACTTAGGGTATCCAATAACTCATTGGAGGGATTTCTCCCACCAGTCTTAGGAAC ATATCCAGAACTGAAAGAGATTGACCTCAGCTTCAACCAGCTTTCTGGGTTCCTCCTACCAATTTTTTTCAACTCAACCA AATTGGTTAGTCTCAACCTCTCGAACAATAAGTTTTCTGGACCAATCCCTATGCAGTTTCAGATTTCCACTGTAAATTCT AGTCTGGTGTTTCTTGATCTTTCACATAACAACTTGAGTGGGCTTCTTCCTCGAAACATGAGCAAGCTTCACAATTTGGC ATATCTATATCTCTGTAGCAATGAATTGGAAGGTGCTATTCCTGATGATCTCCCAGATGAATTGAGAGCACTCAATGTGT CTTTGAATAATCTTTCTGGTGTTGTACCAGACAACTTAATGCAGTTCCCAGAATCAGCATTTCATCCAGGAAACACTATG CTAACATTTCCACATTCGCCATTATCGCCAAAAGATTCTTCCAACATAGGCTTGAGGGAACACGGTTTGCCTAAGAAGTC CGCAACTAGGAGAGCCTTGATTCCATGTTTGGTTACTGCTGCTTTTGTGATGGCTATTGTGGGTATAATGGTTTATTATA GGGTTCATCACAAAAAAGAAAGGACATCTAGGCAAAATGCAGCAAGTGGCATCATCCAAGAGAGTACTACTTCCACATCA AAGAGTCCTAACAGAAATTTTGAATCGTTACCGCCTTCTGATGTTACCCGGAACATTGATCCAATCGTAAAGAAGCCACA AGATCTTGATCATTCTGAATTAGCTAAGAATGAGGAAGGAATGTCCTCTCCTATGTCTATTTTGTCAGCTTCAAATCCTT CATCTTCTAAAAGCCATCTTCAAGTTGAGAATCCTGGTTCCCTCAAAGTATCTTCTCCGGATAAACTGGTTGGGGACTTG CATCTGTTTGATGGATCCTTGGGGCTAACTGCAGAAGAACTTTCACGTGCTCCGGCGGAAGTTATTGGCAGGAGTTGTCA TGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGCATTGGCTGTGAAATGGTTAAGAGAAGGAATAACTAAAGGGA AAAAGGAGTTGGCAAGGGAAATAAAAAAACTGGGGACTATCAAGCATCCAAACTTGGTGTCTATTCAGGGTTACTACCTG GGGCCAAAGGAGCATGAGAGGCTGATTATATCAAATTACATGAATGCACATTCTTTGAACATTTATCTCCATGGTAAGAT TATGGCTTCTTGCTATTTTTGAAACAAAAAATATAGGCATGTTATTTTTAAATAATACTTCTGCTATTCTTGGAATACAT GAAGCTCTTTCAGGATGGTGGATATTTATAAAAATTTCAAGTTTGCTATGTAACTTGGAGTATGCATGAGTGGATGGACT AAACTTTGCATGCCAAAGATGAAGATCTATTAGAATTTGTGTTCACTATATTTACTGGCTGGAGTCACTGGACCGTTGTT TTGAAAAAAAATATAAAACTTATTTTTCTTTTCAAGAGTCATTTTGTTCCTAGATGCTAACAGTTAGGTCTCTTGACAAC CAATGAATAAATCATGTAAAAATCCTTGAAGATTTTTTGCAGAACTTTAATGAGCTGAACTTCAAGGCCTTATTGACTTG TAGATTGGATATTTCAATTGGGATTAGGATTTAGGATCATTTAATATCAAACCACAGTGTCATGTGAAACTTAGTGTCTA TATTTCTCTGCATAAAAATATTCAAAGAGTTGCACCATGTGAAGTATCCATATCAGAGGATCTTGATCCTTTTCAACTGC ATGGTGCCAGCTTTGTTTAACAGTTTCAATATTTTTCTGCAGAAGCAGATAAGAGAAATCTCCATCCTTTGTCTCTTGAT GAAAGGCTCAGGGTAGCTGTAGAGGTGGCCCGGTGCCTTCTTTATTTACACAATGAGAAAGCCATACCTCATGGCAACCT CAAATCCACAAACATTCTACTAGAGACTCCAAACAGAAATGTCCTGCTCACTGACTACAGCTTGCACAGAATCCTCACCG CTGCAGGCACTGCTGAGCAAGTTCTAAATGCCGGCGCACTCGGTTACCGACCGCCTGAGTTTGCGAGATCAAGCAAACCA TGCCCTTCATTAACAAGTGATGTCTATGCATTTGGTGTTGTCTTGTTAGAGCTCTTGACAGGAAGAAGCTCTGGAGAAAT AGTTTCTGGCATTCCTGGGGTGGTTGAGGTCACTGACTGGGTGAGATTCTTGGCCGAACAAGGCCGCGCTAGCCAGTGCC TTGAGAGGTCCCTTGTGGACAAGAACAGTGGAGAAGGACCACCTAGAATTCTTGATGACATGCTAAAGGTGGCACTAAAA TGCATCCTTCCAGCATCTGAGAGGCCTGACATGAAAACAGTCTTCGAAGATCTTTCAGCAATAAGGTAGAGTTTTTCACC ATAGCCTAACCACTAACACCATTGTCTATTAGCATGTTTGGTCCACTTCTAATCCTGGAAGTATCATTTCTTTTGCCATA AAAGCTATTGATATTTAATGAAATTCTTTATCAAAGGAAATTCATTCTTTTTAAACCTTGAATGGGAAGATTGTATATTG TTGAATTTACATCATAGATTCATCTAGTTATTGA
CDS sequence (LotjaGi1g1v0056600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTTGTTGTTGGTGGCAATTGCATTCGGCAATTCAGATATTGATGCACTCCTTGAACTCAAGAAGAGTTTTCAGGA TGACCCTTTGGGTTTAGTTTTCAATTCTTGGGATTCCAAGTCTTTAGAATCTGATGGGTGTCCTCAGAACTGGTTTGGGA TAATGTGTACTGAAGGCAACATCGTCTCAATCGCTCTAGATAATGCTGGTTTGGTTGGGGAGTTCAATTTCCTTGCTATC AGTGGCCTCACAATGCTTCACAACTTGTCAATTGTGAACAACCAGTTCACAGGAAGTGACTTACAAATTGGTCCGATAAA ATCACTTGAGTTTCTTGATTTGTCCCTCAACAAGTTCAACGGGTCGTTACTCTCTAACTTTGTTGAACTGAATAACTTAG TGTATCTGAATCTTTCTTCAAATGAATTTAGTGGCACTCTTCCTATTGGGCTTCACAAACTTGAGAAGTTGAAATACTTA GATTTGCACAATAATAACTTTTCTGGGGATATCATGCATCTCTTTTCTCAGATGGGTAGTGTGCTACATGTGGACATAAG CAGCAACATGTTTTCAGGTACACCGGATTTGGGACTTGGAGATGACTCCTATGTATCATCAATTCAATATTTGAACATTA GCCACAATTCATTGACTGGTGAGCTATTTGCTCATGATGGCATGCCATACCTTGACAATTTAGAAGTCTTTGATGCTAGT AATAATGAGCTAGTGGGTAACATACCTTCCTTCACCTTTGTGGTATCTCTAAGGATTCTTCGACTCGCATGCAACCAGTT GACAGGGTCATTGCCAGAAACTTTGCTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAACTTG AAGGTCCCATTGGAAGCATTACCTCAGTAACTCTCAGGAAGCTTAATTTATCTTCAAACATATTGTCAGGTCCCTTACCT CTTAAGGTAGGCCACTGTGCCATCATAGATTTGAGCAATAACATGCTCTCAGGTAACTTGTCAAGGATTCAGTATTGGGG TAACTATGTGGAAGTTATTCAGCTAAGTACAAACTCACTCACAGGAATGCTGCCAAATGAAACTTCCCAATTTTTAAGGT TAACTGCACTTAGGGTATCCAATAACTCATTGGAGGGATTTCTCCCACCAGTCTTAGGAACATATCCAGAACTGAAAGAG ATTGACCTCAGCTTCAACCAGCTTTCTGGGTTCCTCCTACCAATTTTTTTCAACTCAACCAAATTGGTTAGTCTCAACCT CTCGAACAATAAGTTTTCTGGACCAATCCCTATGCAGTTTCAGATTTCCACTGTAAATTCTAGTCTGGTGTTTCTTGATC TTTCACATAACAACTTGAGTGGGCTTCTTCCTCGAAACATGAGCAAGCTTCACAATTTGGCATATCTATATCTCTGTAGC AATGAATTGGAAGGTGCTATTCCTGATGATCTCCCAGATGAATTGAGAGCACTCAATGTGTCTTTGAATAATCTTTCTGG TGTTGTACCAGACAACTTAATGCAGTTCCCAGAATCAGCATTTCATCCAGGAAACACTATGCTAACATTTCCACATTCGC CATTATCGCCAAAAGATTCTTCCAACATAGGCTTGAGGGAACACGGTTTGCCTAAGAAGTCCGCAACTAGGAGAGCCTTG ATTCCATGTTTGGTTACTGCTGCTTTTGTGATGGCTATTGTGGGTATAATGGTTTATTATAGGGTTCATCACAAAAAAGA AAGGACATCTAGGCAAAATGCAGCAAGTGGCATCATCCAAGAGAGTACTACTTCCACATCAAAGAGTCCTAACAGAAATT TTGAATCGTTACCGCCTTCTGATGTTACCCGGAACATTGATCCAATCGTAAAGAAGCCACAAGATCTTGATCATTCTGAA TTAGCTAAGAATGAGGAAGGAATGTCCTCTCCTATGTCTATTTTGTCAGCTTCAAATCCTTCATCTTCTAAAAGCCATCT TCAAGTTGAGAATCCTGGTTCCCTCAAAGTATCTTCTCCGGATAAACTGGTTGGGGACTTGCATCTGTTTGATGGATCCT TGGGGCTAACTGCAGAAGAACTTTCACGTGCTCCGGCGGAAGTTATTGGCAGGAGTTGTCATGGAACACTCTACAAAGCT ACACTTGAATCTGGTCATGCATTGGCTGTGAAATGGTTAAGAGAAGGAATAACTAAAGGGAAAAAGGAGTTGGCAAGGGA AATAAAAAAACTGGGGACTATCAAGCATCCAAACTTGGTGTCTATTCAGGGTTACTACCTGGGGCCAAAGGAGCATGAGA GGCTGATTATATCAAATTACATGAATGCACATTCTTTGAACATTTATCTCCATGAAGCAGATAAGAGAAATCTCCATCCT TTGTCTCTTGATGAAAGGCTCAGGGTAGCTGTAGAGGTGGCCCGGTGCCTTCTTTATTTACACAATGAGAAAGCCATACC TCATGGCAACCTCAAATCCACAAACATTCTACTAGAGACTCCAAACAGAAATGTCCTGCTCACTGACTACAGCTTGCACA GAATCCTCACCGCTGCAGGCACTGCTGAGCAAGTTCTAAATGCCGGCGCACTCGGTTACCGACCGCCTGAGTTTGCGAGA TCAAGCAAACCATGCCCTTCATTAACAAGTGATGTCTATGCATTTGGTGTTGTCTTGTTAGAGCTCTTGACAGGAAGAAG CTCTGGAGAAATAGTTTCTGGCATTCCTGGGGTGGTTGAGGTCACTGACTGGGTGAGATTCTTGGCCGAACAAGGCCGCG CTAGCCAGTGCCTTGAGAGGTCCCTTGTGGACAAGAACAGTGGAGAAGGACCACCTAGAATTCTTGATGACATGCTAAAG GTGGCACTAAAATGCATCCTTCCAGCATCTGAGAGGCCTGACATGAAAACAGTCTTCGAAGATCTTTCAGCAATAAGATT CATCTAG
Protein sequence (LotjaGi1g1v0056600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLLLVAIAFGNSDIDALLELKKSFQDDPLGLVFNSWDSKSLESDGCPQNWFGIMCTEGNIVSIALDNAGLVGEFNFLAI SGLTMLHNLSIVNNQFTGSDLQIGPIKSLEFLDLSLNKFNGSLLSNFVELNNLVYLNLSSNEFSGTLPIGLHKLEKLKYL DLHNNNFSGDIMHLFSQMGSVLHVDISSNMFSGTPDLGLGDDSYVSSIQYLNISHNSLTGELFAHDGMPYLDNLEVFDAS NNELVGNIPSFTFVVSLRILRLACNQLTGSLPETLLKESSMMLSELDLSQNKLEGPIGSITSVTLRKLNLSSNILSGPLP LKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSTNSLTGMLPNETSQFLRLTALRVSNNSLEGFLPPVLGTYPELKE IDLSFNQLSGFLLPIFFNSTKLVSLNLSNNKFSGPIPMQFQISTVNSSLVFLDLSHNNLSGLLPRNMSKLHNLAYLYLCS NELEGAIPDDLPDELRALNVSLNNLSGVVPDNLMQFPESAFHPGNTMLTFPHSPLSPKDSSNIGLREHGLPKKSATRRAL IPCLVTAAFVMAIVGIMVYYRVHHKKERTSRQNAASGIIQESTTSTSKSPNRNFESLPPSDVTRNIDPIVKKPQDLDHSE LAKNEEGMSSPMSILSASNPSSSKSHLQVENPGSLKVSSPDKLVGDLHLFDGSLGLTAEELSRAPAEVIGRSCHGTLYKA TLESGHALAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHERLIISNYMNAHSLNIYLHEADKRNLHP LSLDERLRVAVEVARCLLYLHNEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFAR SSKPCPSLTSDVYAFGVVLLELLTGRSSGEIVSGIPGVVEVTDWVRFLAEQGRASQCLERSLVDKNSGEGPPRILDDMLK VALKCILPASERPDMKTVFEDLSAIRFI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Gene3D | 7 | 175 | 169 | 8.3E-32 | ||
| Phobius | 10 | 13 | 4 | - | – | |
| Pfam | 12 | 56 | 45 | 1.6E-8 | ||
| SUPERFAMILY | 14 | 297 | 284 | 8.33E-41 | – | |
| Phobius | 14 | 558 | 545 | - | – | |
| PANTHER | 108 | 194 | 87 | 2.9E-265 | – | |
| PANTHER | 108 | 194 | 87 | 2.9E-265 | – | |
| Gene3D | 176 | 252 | 77 | 9.1E-10 | ||
| PANTHER | 202 | 441 | 240 | 2.9E-265 | – | |
| PANTHER | 202 | 441 | 240 | 2.9E-265 | – | |
| Gene3D | 253 | 348 | 96 | 8.1E-13 | ||
| SUPERFAMILY | 329 | 516 | 188 | 6.89E-32 | – | |
| Gene3D | 349 | 446 | 98 | 2.4E-20 | ||
| Pfam | 446 | 460 | 15 | 1.7 | ||
| Gene3D | 447 | 534 | 88 | 6.5E-15 | ||
| PANTHER | 448 | 600 | 153 | 2.9E-265 | – | |
| PANTHER | 448 | 600 | 153 | 2.9E-265 | – | |
| Phobius | 559 | 582 | 24 | - | – | |
| TMHMM | 560 | 582 | 23 | - | – | |
| Phobius | 583 | 988 | 406 | - | – | |
| MobiDBLite | 586 | 678 | 93 | - | – | |
| MobiDBLite | 592 | 620 | 29 | - | – | |
| MobiDBLite | 628 | 644 | 17 | - | – | |
| PANTHER | 643 | 985 | 343 | 2.9E-265 | – | |
| PANTHER | 643 | 985 | 343 | 2.9E-265 | – | |
| MobiDBLite | 649 | 675 | 27 | - | – | |
| ProSiteProfiles | 703 | 988 | 286 | 26.549 | ||
| SUPERFAMILY | 707 | 982 | 276 | 2.85E-45 | ||
| Pfam | 707 | 980 | 274 | 8.2E-29 | ||
| Gene3D | 709 | 781 | 73 | 8.2E-13 | – | |
| Gene3D | 782 | 987 | 206 | 5.7E-34 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0056600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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