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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0060900 |
| Transcript ID | LotjaGi1g1v0060900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Structural maintenance of chromosomes protein; TAIR: AT2G27170.3 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q56YN8|SMC3_ARATH Structural maintenance of chromosomes protein 3; TrEMBL-Plants: tr|I1M7D7|I1M7D7_SOYBN Structural maintenance of chromosomes protein; Found in the gene: LotjaGi1g1v0060900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8534492..8543685) extracted from Lotus japonicus Gifu genome v1.2.
CCAGTTTTCTTCCATCTTCGCTCTGCAAATCTCTCTTCTCACTCTCAATTTCCTGAAAAAATATCTCGAAACCCTAAAAT GATTCCTAATTTTGATTTCACTTGAATTTCTTGTTCCGGTACTCGATTTCGCTGCTAAATCGTGGTGAATCACTTCATTC CATGTTTTCGAACTTGATTTTGCTTATCGGAAGCTTGTTTTCTGGTTTCAGAGCGAAAATTTCATTCTCGTTGAGGTCGT TCTTGCTTATTTGCTGATTTAGAATCAGGAATCGTTGCGGATTAGGTTTTTTCAGTTGATTTTGTGAATATGCTTTACTG TGTAGTGTGTAGGTAGTGAGTGATTTCTGAATTCTACTGTGATGGCGCGTTGCGTTTTGTTTTGCGAATACAGTGCTGAT TTGACTTGAGAAAGCATTTGGAATTCTTTTTGGTTGTGTTTGTAATATATCATTACACTTATGGAATTTTATTTATTTGC TGTTGTAGGTACTGTTATGATAGTTTCATCATGTACATTAAGCAGGTAATTGTGCTTCGAATTGCATTTTATTAACTGCT GTTATCCGAATTAATACGTTTGATTAAACTGTATATTATGTTGCTATTTGGAGTTGGTTCCTTGCTAAATGGTCTTCTGA TGCATTTGCGTGTATTTTTTTCTTTCTTTTTTTGAAGATTGTGATTGAAGGTTTCAAGAGTTACCGAGAGCAAATTGCCA CCGAGACTTTCAGTCCAAAAGTGAATTGTGTTGGTAATATAATTTTACTTGAAAGCTTTTCAATGCTTTCTTCTATTGAT TCTGGAAAAATACTTTGAAATGCATAGTATGGGCATCTTATTTCATGATGGTAGCTCAACGTAGTACCGAAATGATGCAA TATGTAATAAACTTAAAAGTCAAATTTTATTTGTCCAGAGATAGATATATTTGCATAGATGACATATTTTTTTCTTGTGT GTAAAAACCTATTAGTATTTTTAGAATAATAAGTCATAATAATCACCCTAAATGGTTTCATAAACAATTGCAAATGGACA TACATATAATAATTTTCATTATAAAATGGCTATATAGTCCTTTCTCTCTCTTTGGATTAAAGGGTTTTTCTTTAAAAGAG AGAGAAGTACAAAGCTGAGGGTAATGTGTTGTCTTTGGAGGGGCAAAGAGGAAAAAAAGGCTGAAAAACTTAGTATGAAA GTAAAGCCTGCCAATTCCACTGCTTGACCAAGGAAGCCCTCTAAACCAACCCATGGCATTAGCTGAACACCATAGCAATG AAGACAGCTGTTCCCATATAAGGGAATATATATATATATATATATATATTCTTGAAAATCCTGCCAACGCAAAACTGGCA CATTTCCATTAAACATTCCTGTACTTTGCAGAGCCTTTTAAAAGCTAAACTATAGAACTCTAGCATCTGGACTAGATTGG ATTGATTGCTAGTCTTGTAAGCGCTAAGAGAAGTGTATAGCTAAAAATTTATTAGGAAGTGCTTTATTAAGGTTGTGGTG TGGAGTAAATTGTATTAACTGATTCTGTTGAATACTGCTATCCTAAATCCAAACGAGAGATTTCACCTTAAAATGAACCT TTGATTTCCATTTTCTTAGGGTCTATTGAAAGGAATTGTATTTGGAGAGTAGGATTTACTACAAAAATAAGATATGGCTA AGTCAAAGGTCCAAACCCTTAAATCTATTTAAGAAGAGGCATTAAGCAATCAAGCATATAAAGGGACTCTAACTCCAGGT TCATCTATAAATTTTTCTTTTGGGCATCAGATAAGGATTTACTAAGATAGAGGCCTAAGAATAGAAGGATCAATTCGTGT TAGATGTAGGTTGTAACCAGTTTTAGTAATTGCCAAGAAAAAAAGAGCTGTGGAGACTCTAAGAAGAACGCAGTTGTGAC ACTGAAACCATTGTATGATCTCATCAGACTTGATTGTGTTGTTGTTGTGAATGTTCCCACATCAAGCTAAAGGCTGTATT AGTTGTTTTGGCAGCTACATTCTTTGCTCACTACATTGTCTTCATTTTCATTACTTTTTTATACTCTAATGATTCTTCCT TTTTTTTATTACATCTCATTTGATGTAAAGTTGTTTCAAGATATCCTTTTTGTCATTTATATTTAAATCAAATGAATGTA TCTTAAGTATATTACATTTATATTTTAATTATTTATTTTTACAGTTGGTGCTAATGGATCTGGGAAGACAAACTTTTTCC ATGGTACGACAATTGGCATTTCTTTATTCTCTGATTTATTTCTTTAGTGGTTTTTATGAAGTCAGTTAAATATGATCTGT CATTTTTCACTCATTTTTCCTCCTTTTTTCTCTTGTATCTAGCCATTCGTTTTGTGTTGAGCGATCTCTTTCAGAACCTA CGCAGTGAGGATAGGCATGCACTACTCCATGTACGACACAGTCCATATTTCCTTTTAATAATACCTTTGGTTCTTACCTA TCCCTAATCAATTATAGAATTTGATCATGCTTATATGAATGATTCTCTGCGCAGGAAGGGGCTGGACACCAGGTTTTATC TGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTAATATTTTGAGAACAATATAATATTTTTTTAA TTCACTATAGAGGCTGTTACAGAGAATATTCACATAGGTTCTGCTTGGCGGTCACATTGTTTTTTTCAAGTTATCAATAT CTATTATCTACTCTTTTAAATGGTGGATGGTTGGACATTTATTTTTTCTTGTGCAATGAATTCATGCTATGGGCTGTACT GCTCAATCTATTTATAGGATGGATCTGTTGGAAAATCAAAGAATCTAATGGCTGAGAGATTTTGAATTTAGCTAAATAGA AACTTGTGGCGACTGGATGAGTAGTACATGTTTTTCTTCTTTTAAAATTTATGCCATTATATGAATGATTTCTATGCTGT ATAAAATTCTGCTCATTCAATTTTTTGAAACTTGAAAGACTTTTGCACTGATCTTGGGATGGGATTTGGATGGTGCATAT TTTCTGCGAGCTGAGAAGTAATTTGATTAATCATGAGGTTCTCTGATTTGGTCAAAGTTTTGATTTTTTTTCCTAATGCA ATTTCAATCTAATGTTAGTTGCTTTATCTCTAATCCCTTTTTCTGAGTTATCAGCAAAATCTCTTGGTCAATGCCTGGTG CTGTACATTTCCGCTGCTTCAGAATTTCTCTTACTTTCTTTTTTAAACTTTTTTGAAAGTTCTTTTTTAAACTTAAGCAT TAGTAACCGCTTAATTGCAATATCCGTACATGTACTCAATCTTGGTGTCTATTTTTGCTGGTAAACAGGTTGACAAGGAA GAAGTGCGCCTGCGTCGGACTATTGGTTTGAAGAAGGATGAGTATTTTCTCGATGGAAAACACATAACGTGAGTATAAGA GAGCAAGTACTATAAATTTATTGTCTCGAGAAACTTGACATTACGTTATGCTCTTTGGTCATATCATGAGTATTAATCTA GGCCCTAAAAAAGATGATAAATGATCTGCAGAAAAACTGAAGTGATGAATTTACTGGAAAGTGCTGGATTCTCTCGCTCA AATCCTTATTATGTTGTACAACAAGGAAAGGTATTGGTGCATGACGATGGTGCTTTGGTTTGGTGTTTTGGAAACTCTGA AGTTGAAGTTGATTTCTAAACTTGTCCCTTTCTTGATCTTGCATAGATAGCATCACTGACCTTGATGAAAGACTCTGAAC GATTGGATTTACTGAAGGAGATAGGTGGTACTAGAGTTTATGAGGAGAGACGTCGTGAAAGTTTGAAAATAATGCAGGAA ACTGGCAAGTCATTTATATTTATTTCTTTTCAAATTTATGATTTGTAAACAATGTTGTTAATGGTGGAAAGCCAAAATCC TGTCATATTTGACAAATAATGATGGCGGATTATGGCGGCTTGCTGAATTCCTCATTGCCGCCGCCATGGCTGATATTTGA TGACACTGCTTCTGCTTGTAAGTTATAACTCTCACTTTCTTGTTATTGCTGTTATTAACATGCATTTTTTCTGTCAAACA GGTAACAAACGAAAGCAAATAATCCAAGTTGTACAGTATTTAGATGAGAGGCTGAAAGAACTAGATGAGGAAAAAGAGGA ACTTAGAAAATATCAGCAACTTGACAAGCAGAGAAAATCCTTGGAATACGCCATTTATAATAAAGAAGTTCAAGATGCTC AGCAAAAACTTATAGAGGTTATCTATGTTAAAATCTGACCACATTTATTATTATTTGCCCTGTTTCTACTGTGTTTTATG AGTTGGATTTATTTCTGTTAGTTAGTCATGGGCCTGCTGTATTTGGGCCTAGGTTTGATTTTATCTATATCTATTAGTTA GTTTTAGTATGGTTTGGTATTGACTCTATTTTTTATTATTTGAGTAGGGCCTATGTTGGGCCAGAGTCATTAGCTTAGTA GGGTGTGGTGATGAGATGAGAGAATGAAAAGATTAGGAACTCCATGCATTTATTTGTAGTTTATAATTGCACACTCCATG TTCTGTTAGCCTTCATAAGTCAATCATAAATTTGGACGTAGTCATTTTTTAATTCCGGTTCTAATGCGTGTAGTTGAATG CTTGTCTTCTTATTTTAGATAGAAGAAGCTCGCAACAAGGTTTCTGAAACATCATCAAAGATGTATAATGATGTTCTTGA TGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGACGTAACGAAAGAACTTCATAACTTTAACAAAGAAAAAG AGGTTATTGACAAGAGACGAAAAGAGGCACTAAAGAAGCACACGGAGCTTGAACTTGATGTCAAAGATTTACAGGAGAAG ATCTCTGGAAATATCCGAGCCAAAGTACTATTCTAATGCAATCATCTCAGAAGTTCTTCTAGAAGGGATAGTTATATACT TGGTTAATCTATTACCTACATGCTTTCAGAAAGATGCTGCAAAACAACTGGGGATACTTGAGAAAGAAATTCAAGACTCA ATGGATGAACTGGACAAAATCAGCCCTTTATATGAGGATCATGTTAAGAAAGAACAAGACATAACAAAGCGGTATGCTAT GGTTGTATATGTTTTACTAATATGCTTCAATAAAGTATATTGTACTTAACTCTTCTAGTGTTTGTATTCTGACTGTCATG GTAGTATGTTTTTTACTCACTCTATTATAACATGTTAATCTTTAATTTAGTTAAGTACTATTTTGACTACAAAATTTGGA TTGGTTAGGGTACATGATGGAGAAATATATTTTATATTTCACATGTTTGCTTTAGAGCCTTTCACAAATCTTAAATATTA TGCTACACACAACTTATATTAGCACGGGCATGTATAAATCTATGTAATTTATACTATCATTTATAGAGGTTATTAAATCA GATTCTCGTCCATCTCTCACAAATACATGAATTGTTAGAATTATGGAGCGTGAGAAGAAACTCAGTATACTATATCAAAA GCAAGGACGTGCCACCCAGTTTTCGAGTAAAGCTGCACGTGATAAGTGGCTTCAAAAGGAGATAGATGATCTTGAACGGG TGCTTTCTTCAAACACAGAGCAGGCAAGATTTCATTTATTTGATTGAGCTATACTGAATTATGGCCCAAATACTTTTTCT TTGTTATATGCATAAAAGTTCTGTTTTTCAGCAGGTTGTTATCCTTATTTCTATTAGTTTAAGGGTAATAGCATGAATTA AGTCTCTCTTCTTTATTGTATTTTTTTTTTCATTTTTTTCTGCATAATAGATTAAGTATTATTAGAGAATAGAATGAAAA AGTACAAGATCTTAGGACTATAATATATAACCTTTTGTGTCGACACCCAACAACTTAAGCTTTTAGGATAAATTGTTCAT GGCATAATATCATAGCCTTTTATGACCAGGTTATGTAGTGTTTGATCCTCTGTTTTCTATTGTTGTTTTGGGCCACAGGA GCAAAAGCTTATGGAGGAAATTGACCGGCTTAATGTTGAATTGCACAATAATGATGAGGACATTAAGAGCCGTAAAGCAG ATATTACTACTTTGGAATCTCTCATTACTCAGTCACGTGACGGGTTTAATCATTATAAAGTAGCAAGAGATAAGTTGCAT GATGAGAGGAAGTATGTTTATCTTCTTTTGTCTTTTTCTGTTATTTGTGTGTGTGTGTGTATAGATGAAAGAAGAACTAT TATTAGAAAGTAGGAAAGAGTACTTTGAAAGTGTAGTATGGAGTGTAGCAAAAGCAGAAAGGAGAATCATAGCGAAAGTA ATTCCCAAGTAAATATTCTTATAATTCAAATTGTTTTATTCTAGGTCATTATGGAGCAAAGAGAATGAACTTACTGCTGA AATTGATAAGCTCCGAGCAGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGAGTGAGTAAACCCTCTA TCTAACTTCTTTTAACATAGAATTTCTCCAAACCATTAAATTCTCAGGTATGGTTGTCCCTTGTCATGGTGATTCTGTCT GAAGCTTAGCACTTCTCATTATTTGAGAGGTACTTTGTGCTTGTTTAGGATGTAGATTTATGATAACTTGTACATACCCT GTTGGACTTAAGTAATGAACACAAAGTGTCATCATAGTTTTAATTTGGTGTCACTTTAAACGCTCAGAAACTGTTTAGAT ATAACCTTTAGGTCTAATTATAACCTTCTATACGATATATAGATGCAGCAACTTCTGATCGAAAAGAAACTGCAGTAACA CTTCACCTAAAAAATCCTCAAAAAATATGTGACATTGAAAGTTAAAAGATATAATGTGATTCTGTTTTGTGGTGGCAGTA CTTTAATTATTAAATTGGTAAAAGAGTTTCTTTCCACCATTTAGGTTGTAAAGTACTAAATGGAACTATCAAGTAAGAGT CGGAAAAATAGAAAAAGGATAGAATCATGAACTTGAGATTGATGTCAGTGAAGAATGTAATAACGCTTTTCTCATTCTGA TTCTGAATATTGATTTTTGGGACCTTTCTTCAAGTGATGGCGCAAGTCCTCCGCAATGATATATGATATTTGTGTTCCCA ATGTTTTCTTCATCTACATTTGTGGAATGGAGATTTCTTGGCATCTGGGAAGATAGTGTATGCTGCTGTTTTCTATTGAT TTTGGGGATGATCTGTCATGATGATATTTCTTAAGACGTATTCGGGGGGCTGGTTGATAATTTCATATTGCATCATGTTT GATACTACTGTAATGTGCAGGATGTCAGAAGAGGGTTGAATTCAGTTCGGAAGATCTGCAGGCAGCACAACATTTCTGGA GTTCATGGCCCAATTATCGAGTTACTGAATTGTGATGACAAATTTTTCACTGCAGTTGAAGTTACAGCAGGAAACAGGTA ATTTCTCACCATGAGTCATATTCATAGATTGTATTTTTGGGATTTAGGGTGGGGGTGGTGAGAGAGATTTGGCACATCCA TAGCATGTAGTTGTTCCATTTTTTTTAGTTTCAGTCTCTGTTCTTGGCCTGATCTCTTTACTGGTCTTTTTAAACAGCTT ATTTCATGTGGTTGTTGAAAGTGATGACAAGTCAACCGAGATAATTAGACATCTTAATTCACAGAAAGGTGGAAGAGTTA CATTTATTCCTCTCAACAGAGTAAAGGCTCCACACATCACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAG TTGAATTTTAGAGATGACTATAAACCCGCATTCAGTCAGGTTAGCTCTACACGAATTTTATGTTGTAATTACGCATGGGC ATGTCGCAGCATCTTCAGGTTCTATCTGCTAAATAACATAACTAAGATGGTTTATCTGGTTATGACATCATAGTAAAATT GATGCACAGTTGAGAAGCATCTTGAGTTAGGATAATAATTGTATTGAAGGACTTTTGTGTTAATTAGGGGTTATTATAAT ATCATTATGAATTATAGGATTTTCTCCTCTTTTAGAGATCCTATCCTATTTATTAGGAATTTATCTTTGATAAGTTATTC ATTCTTCGGAGAATATATGTTTGATCTTATTAAAATTTGGGAGGCCTAACTCTACCCCAAAAGCTAGCTTAGGGGCAAAG TTTACTCTACCCAATATATGGACATATTTAGCCATATCTCTAGTCAATGTAGGACTTCTCAACACCCCCATCACTCCCAG AATTTGAAATATGGAGCGTAAAGTTTGCAGGACCGGACATCTGCGGGTGGCCCATTTGTGGCACACCAGAATTTGGCATA AGCAGCGTGAAGTTTGCAGGACCGGACATCCGGGGGTGGCCCATTTGTGGGTGTCTGGGTGACCCAATAAACGGATCCAA GATAGGTTTTGACATGATATTAGAATTTGGGAGGCCTAACTCTATCCCAAAAGCTAGCTTATAGGTGTCAATGTGGGGCT TCCTACCAATCTTATAATGTTAAGATAAATAGACCACACTTCATTTATACATCATTCGCTACGTTTGCATTATCTTCCTT TTCCCCCTTTTGTTTTGTGCACATTAGAGGATGCATTATCCCCTTGCTGCCGGAAAAAACTTTTTTCCTCTTCTCTCATG ATATTTCCTTTCTATAAAAAAATGATGATTGGCAGTTTCCAAACTACTGTAATACCTAACACAACCATCTTGAAGCAAGG CTCATGTTGCCTAAAAACTTGCAGCAGATTCTTATTACCGGACCTGGCCCTGATATTGGTACAGTTAAACTCATTTCTAC ACCTGTATTATAAATTTTCTGTTAGGTATTTGCTAGAACAGTTATCTGCAAGAATTTGGATGTGGCTTCAAGGGTTGCTC GTGCTGATGGTCTGGACTGCATAACACTGGAAGGTTGGCCTAATTCTTCCAACCTTAGGGTTGTTTGTCTACATGATGTT GTCTGTTGAAGTGTGTTGCCCTGACATATTGTTGTCTTTCTCATTACAGGTGATCAAGTAAGCAAGAAAGGTAGTATGAC TGGAGGATTTTATGATCACAGGCGATCAAGATTGAAGTTAATGAATATCATTAAGCAGAATGCGGACAATATTCGCATTA AGGAGGAGGAGTTAGAGAAAGTCAGATTTAGTCTACATGATATCCTTATATGCTAATAAATGAATGCTCTTTTT
CDS sequence (LotjaGi1g1v0060900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTCGAACTTGATTTTGCTTATCGGAAGCTTGTTTTCTGGTTTCAGAGCGAAAATTTCATTCTCGTTGAGGTACTG TTATGATAGTTTCATCATGTACATTAAGCAGATTGTGATTGAAGGTTTCAAGAGTTACCGAGAGCAAATTGCCACCGAGA CTTTCAGTCCAAAAGTGAATTGTGTTGTTGGTGCTAATGGATCTGGGAAGACAAACTTTTTCCATGCCATTCGTTTTGTG TTGAGCGATCTCTTTCAGAACCTACGCAGTGAGGATAGGCATGCACTACTCCATGAAGGGGCTGGACACCAGGTTTTATC TGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTTGACAAGGAAGAAGTGCGCCTGCGTCGGACTA TTGGTTTGAAGAAGGATGAGTATTTTCTCGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTACTGGAAAGTGCT GGATTCTCTCGCTCAAATCCTTATTATGTTGTACAACAAGGAAAGATAGCATCACTGACCTTGATGAAAGACTCTGAACG ATTGGATTTACTGAAGGAGATAGGTGGTACTAGAGTTTATGAGGAGAGACGTCGTGAAAGTTTGAAAATAATGCAGGAAA CTGGTAACAAACGAAAGCAAATAATCCAAGTTGTACAGTATTTAGATGAGAGGCTGAAAGAACTAGATGAGGAAAAAGAG GAACTTAGAAAATATCAGCAACTTGACAAGCAGAGAAAATCCTTGGAATACGCCATTTATAATAAAGAAGTTCAAGATGC TCAGCAAAAACTTATAGAGATAGAAGAAGCTCGCAACAAGGTTTCTGAAACATCATCAAAGATGTATAATGATGTTCTTG ATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGACGTAACGAAAGAACTTCATAACTTTAACAAAGAAAAA GAGGTTATTGACAAGAGACGAAAAGAGGCACTAAAGAAGCACACGGAGCTTGAACTTGATGTCAAAGATTTACAGGAGAA GATCTCTGGAAATATCCGAGCCAAAAAAGATGCTGCAAAACAACTGGGGATACTTGAGAAAGAAATTCAAGACTCAATGG ATGAACTGGACAAAATCAGCCCTTTATATGAGGATCATGTTAAGAAAGAACAAGACATAACAAAGCGAATTATGGAGCGT GAGAAGAAACTCAGTATACTATATCAAAAGCAAGGACGTGCCACCCAGTTTTCGAGTAAAGCTGCACGTGATAAGTGGCT TCAAAAGGAGATAGATGATCTTGAACGGGTGCTTTCTTCAAACACAGAGCAGGAGCAAAAGCTTATGGAGGAAATTGACC GGCTTAATGTTGAATTGCACAATAATGATGAGGACATTAAGAGCCGTAAAGCAGATATTACTACTTTGGAATCTCTCATT ACTCAGTCACGTGACGGGTTTAATCATTATAAAGTAGCAAGAGATAAGTTGCATGATGAGAGGAAGTCATTATGGAGCAA AGAGAATGAACTTACTGCTGAAATTGATAAGCTCCGAGCAGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTC CTGGAGATGTCAGAAGAGGGTTGAATTCAGTTCGGAAGATCTGCAGGCAGCACAACATTTCTGGAGTTCATGGCCCAATT ATCGAGTTACTGAATTGTGATGACAAATTTTTCACTGCAGTTGAAGTTACAGCAGGAAACAGCTTATTTCATGTGGTTGT TGAAAGTGATGACAAGTCAACCGAGATAATTAGACATCTTAATTCACAGAAAGGTGGAAGAGTTACATTTATTCCTCTCA ACAGAGTAAAGGCTCCACACATCACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAATTTTAGAGAT GACTATAAACCCGCATTCAGTCAGGTATTTGCTAGAACAGTTATCTGCAAGAATTTGGATGTGGCTTCAAGGGTTGCTCG TGCTGATGGTCTGGACTGCATAACACTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTATGATC ACAGGCGATCAAGATTGAAGTTAATGAATATCATTAAGCAGAATGCGGACAATATTCGCATTAAGGAGGAGGAGTTAGAG AAAGTCAGATTTAGTCTACATGATATCCTTATATGCTAA
Protein sequence (LotjaGi1g1v0060900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSNLILLIGSLFSGFRAKISFSLRYCYDSFIMYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFV LSDLFQNLRSEDRHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLLESA GFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGNKRKQIIQVVQYLDERLKELDEEKE ELRKYQQLDKQRKSLEYAIYNKEVQDAQQKLIEIEEARNKVSETSSKMYNDVLDAHEKSKDLENTLKDVTKELHNFNKEK EVIDKRRKEALKKHTELELDVKDLQEKISGNIRAKKDAAKQLGILEKEIQDSMDELDKISPLYEDHVKKEQDITKRIMER EKKLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNTEQEQKLMEEIDRLNVELHNNDEDIKSRKADITTLESLI TQSRDGFNHYKVARDKLHDERKSLWSKENELTAEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICRQHNISGVHGPI IELLNCDDKFFTAVEVTAGNSLFHVVVESDDKSTEIIRHLNSQKGGRVTFIPLNRVKAPHITYPQSSDVIPLLKKLNFRD DYKPAFSQVFARTVICKNLDVASRVARADGLDCITLEGDQVSKKGSMTGGFYDHRRSRLKLMNIIKQNADNIRIKEEELE KVRFSLHDILIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| Phobius | 5 | 13 | 9 | - | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 732 | 714 | - | – | |
| Gene3D | 32 | 210 | 179 | 5.5E-42 | – | |
| SUPERFAMILY | 33 | 292 | 260 | 1.38E-38 | ||
| PANTHER | 33 | 727 | 695 | 0.0 | – | |
| PANTHER | 33 | 727 | 695 | 0.0 | – | |
| Pfam | 34 | 165 | 132 | 1.2E-31 | ||
| CDD | 35 | 198 | 164 | 8.28173E-98 | ||
| Coils | 218 | 248 | 31 | - | – | |
| Coils | 250 | 287 | 38 | - | – | |
| Coils | 292 | 347 | 56 | - | – | |
| Coils | 355 | 375 | 21 | - | – | |
| Coils | 431 | 465 | 35 | - | – | |
| SUPERFAMILY | 505 | 707 | 203 | 2.09E-47 | ||
| Coils | 508 | 528 | 21 | - | – | |
| Gene3D | 543 | 697 | 155 | 2.8E-36 | – | |
| Pfam | 554 | 665 | 112 | 1.1E-29 | ||
| SMART | 554 | 666 | 113 | 9.6E-35 | ||
| Gene3D | 614 | 693 | 80 | 2.8E-36 | – | |
| Coils | 702 | 722 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Chromosome | A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. | ||
| Biological process | Chromosome organization | A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome. |
Expression pattern of LotjaGi1g1v0060900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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