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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0098900 |
| Transcript ID | LotjaGi1g1v0098900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT3G53380.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.1; TrEMBL-Plants: tr|G7KFW0|G7KFW0_MEDTR L-type lectin-domain receptor kinase; Found in the gene: LotjaGi1g1v0098900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15083815..15085956) extracted from Lotus japonicus Gifu genome v1.2.
GTTACAGTGTTAGTGTTACTTCCACTACTTCACTCTTTGCTTCCTTCAATGTCTCTTGCTTCATTCATCCATGTCTTCTT CACAATCTTCACCATCTTCTTCTCTGTTTCTGCTGTCGAATTTGACTTCGGCACATTGACTCTAAGCAGCCTCAAGCTTC TCGGCGATGCCCATTTAACCAACGGCACAGTAAGCCTCACGCGCGACCTCGCCGTACCCTTCTCCGGCGCCGGCCAAGCA CTATACTCACGCCCCGTCAGATTCCGGCAACCGGGTACCAACATTCCGGCGAGCTTCACCACCTTCTTCTCATTCTCCGT CACCAACTTGAACCCCTCCTCCATCGGCGGTGGTCTCGCGTTTGTTATCACCCCGGATGATGAAACAGTCGGCGACGCAG GTGGGTACCTCGGCCTCGCCGCCGGCTTCATCGCGGTGGAGTTTGATACCCTTATGGATGTTGAGTTCAAGGATATTAAC GGGAACCATGTTGGCGTGGACCTCAACAGTGTGGTTTCGAGTCAAGCTGGTGATTTGGATTCCATTGGGATCGATCTGAA GAGTGGCGACACGGTGAACGCGTGGATCGAGTTCGATGGATCGATTCAGGGGTTGAATGTTTGGGTTTCGTATTCCAATC TGAAACCGAAGGAACCCGTTTTGTCGATGAATCTTGACATGGGTCAGTATCTGAATGATTTCATGTATGTGGGGTTCTCT GGTTCAACGCAGGGTAGTACAGAGACTCACCGCGTGGAGTGGTGGAGCTTCAGCTCGTCATTCGGTGGAACAGGGTCAGG ATCCTCGCCGCCGCCGCCTCCGGCGGTGAGTTTGATGAATACGACGGCGAGTTCTGTGAAGTCGCCGCCTCCTTCTCCGG CTCCGTCAGCAAATTCATCGAATGAGGTACGGAAGGAGAGCAAATCGTCTTGCCACAATGGGCTCTGCAGGCAAGGTTTG GGAGCGGTTGCTGGGGTTGTTACTGCAGGGGCTTTCGTTTTGGCTTTGTTTGCAGGGTCGTTGTTTTGGGTTTATTCTAA GAAGATGAAGAGAGTTAACCGTTCTGATTCTCTAGGATCGGAGATCATCAAAATGCCAAAGCAGTTTAGCTACAAGGAGC TCAGGACTGCTACCAAGTGCTTCAATGCGAATAGGATAATCGGTCACGGTGCGTTTGGGACTGTTTACAAGGGGATTTTG CCTGAGAATGGGGACATTGTTGCTGTGAAAAGATGCAGCCATAGTAGTCAGGGTAAGAATGAGTTTCTATCTGAGTTATC CATAATTGGAAGCCTTAGACATCGGAACCTTGTTCGTCTTCAAGGATGGTGCCATGAGAAAGGCGAGATTTTGCTGGTGT ATGATTTGATGCCTAATGGGAGTTTAGACAAGGCTTTGTTTGAGGCGAGAACGCCTCTTCCTTGGTCTCACAGGCGCAAG ATTTTGCTAGGCGTGGCTTCTGCATTGGCCTATTTGCATCAAGAGTGTGAGAATCAGGTGATTCACAGAGATATCAAGAC TAGTAACATAATGTTAGATGAAGGGTTCAATGCCCGTTTGGGGGATTTTGGATTGGCGAGGCAAACGGAGCACGACAAGT CTCCGGACGCGACGGTGGCGGCTGGAACAATGGGGTACCTGGCGCCTGAGTATCTCCTTACAGGTAAAGCTACGGAGAAG ACCGATGTGTTCAGTTATGGCGCGGTGGTGCTTGAGGTTGCCAGTGGGAGAAGGCCTATAGAGAAAAATGCTGCTGGAGC TGGGGTTGAGAAAGATAGGGTGAGAAGTAATTTGGTTGAATGGGTTTGGAATTTGCACAGGGATGGGAAATTGGTAATGG CAGCTGATCCAAGGCTTGAGGGTGAGTTTGATGAGGGGGAAATGAGAAGGATCCTCTTGGTTGGTTTAGCTTGCTCTCAT CCTGATCCATTGGTAAGACCTACTATGAGGGGTGTGGTTCAAATGCTGGTGGGTGAGGCTGATGTGCCTATTGTACCAAG AACCAGACCATCTACAAGTTTGAGTACTTCACACTCTCACCTCTTACTGAGCTTGCAAGATAGTGTCTCTGACTGTGATG GTATAATCACCATCTCTACCTCTTCATCAGAGAACAGCTTCAATGGTGGAGATATAGTCTGA
CDS sequence (LotjaGi1g1v0098900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCTTGCTTCATTCATCCATGTCTTCTTCACAATCTTCACCATCTTCTTCTCTGTTTCTGCTGTCGAATTTGACTT CGGCACATTGACTCTAAGCAGCCTCAAGCTTCTCGGCGATGCCCATTTAACCAACGGCACAGTAAGCCTCACGCGCGACC TCGCCGTACCCTTCTCCGGCGCCGGCCAAGCACTATACTCACGCCCCGTCAGATTCCGGCAACCGGGTACCAACATTCCG GCGAGCTTCACCACCTTCTTCTCATTCTCCGTCACCAACTTGAACCCCTCCTCCATCGGCGGTGGTCTCGCGTTTGTTAT CACCCCGGATGATGAAACAGTCGGCGACGCAGGTGGGTACCTCGGCCTCGCCGCCGGCTTCATCGCGGTGGAGTTTGATA CCCTTATGGATGTTGAGTTCAAGGATATTAACGGGAACCATGTTGGCGTGGACCTCAACAGTGTGGTTTCGAGTCAAGCT GGTGATTTGGATTCCATTGGGATCGATCTGAAGAGTGGCGACACGGTGAACGCGTGGATCGAGTTCGATGGATCGATTCA GGGGTTGAATGTTTGGGTTTCGTATTCCAATCTGAAACCGAAGGAACCCGTTTTGTCGATGAATCTTGACATGGGTCAGT ATCTGAATGATTTCATGTATGTGGGGTTCTCTGGTTCAACGCAGGGTAGTACAGAGACTCACCGCGTGGAGTGGTGGAGC TTCAGCTCGTCATTCGGTGGAACAGGGTCAGGATCCTCGCCGCCGCCGCCTCCGGCGGTGAGTTTGATGAATACGACGGC GAGTTCTGTGAAGTCGCCGCCTCCTTCTCCGGCTCCGTCAGCAAATTCATCGAATGAGGTACGGAAGGAGAGCAAATCGT CTTGCCACAATGGGCTCTGCAGGCAAGGTTTGGGAGCGGTTGCTGGGGTTGTTACTGCAGGGGCTTTCGTTTTGGCTTTG TTTGCAGGGTCGTTGTTTTGGGTTTATTCTAAGAAGATGAAGAGAGTTAACCGTTCTGATTCTCTAGGATCGGAGATCAT CAAAATGCCAAAGCAGTTTAGCTACAAGGAGCTCAGGACTGCTACCAAGTGCTTCAATGCGAATAGGATAATCGGTCACG GTGCGTTTGGGACTGTTTACAAGGGGATTTTGCCTGAGAATGGGGACATTGTTGCTGTGAAAAGATGCAGCCATAGTAGT CAGGGTAAGAATGAGTTTCTATCTGAGTTATCCATAATTGGAAGCCTTAGACATCGGAACCTTGTTCGTCTTCAAGGATG GTGCCATGAGAAAGGCGAGATTTTGCTGGTGTATGATTTGATGCCTAATGGGAGTTTAGACAAGGCTTTGTTTGAGGCGA GAACGCCTCTTCCTTGGTCTCACAGGCGCAAGATTTTGCTAGGCGTGGCTTCTGCATTGGCCTATTTGCATCAAGAGTGT GAGAATCAGGTGATTCACAGAGATATCAAGACTAGTAACATAATGTTAGATGAAGGGTTCAATGCCCGTTTGGGGGATTT TGGATTGGCGAGGCAAACGGAGCACGACAAGTCTCCGGACGCGACGGTGGCGGCTGGAACAATGGGGTACCTGGCGCCTG AGTATCTCCTTACAGGTAAAGCTACGGAGAAGACCGATGTGTTCAGTTATGGCGCGGTGGTGCTTGAGGTTGCCAGTGGG AGAAGGCCTATAGAGAAAAATGCTGCTGGAGCTGGGGTTGAGAAAGATAGGGTGAGAAGTAATTTGGTTGAATGGGTTTG GAATTTGCACAGGGATGGGAAATTGGTAATGGCAGCTGATCCAAGGCTTGAGGGTGAGTTTGATGAGGGGGAAATGAGAA GGATCCTCTTGGTTGGTTTAGCTTGCTCTCATCCTGATCCATTGGTAAGACCTACTATGAGGGGTGTGGTTCAAATGCTG GTGGGTGAGGCTGATGTGCCTATTGTACCAAGAACCAGACCATCTACAAGTTTGAGTACTTCACACTCTCACCTCTTACT GAGCTTGCAAGATAGTGTCTCTGACTGTGATGGTATAATCACCATCTCTACCTCTTCATCAGAGAACAGCTTCAATGGTG GAGATATAGTCTGA
Protein sequence (LotjaGi1g1v0098900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLASFIHVFFTIFTIFFSVSAVEFDFGTLTLSSLKLLGDAHLTNGTVSLTRDLAVPFSGAGQALYSRPVRFRQPGTNIP ASFTTFFSFSVTNLNPSSIGGGLAFVITPDDETVGDAGGYLGLAAGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSQA GDLDSIGIDLKSGDTVNAWIEFDGSIQGLNVWVSYSNLKPKEPVLSMNLDMGQYLNDFMYVGFSGSTQGSTETHRVEWWS FSSSFGGTGSGSSPPPPPAVSLMNTTASSVKSPPPSPAPSANSSNEVRKESKSSCHNGLCRQGLGAVAGVVTAGAFVLAL FAGSLFWVYSKKMKRVNRSDSLGSEIIKMPKQFSYKELRTATKCFNANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSS QGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQEC ENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASG RRPIEKNAAGAGVEKDRVRSNLVEWVWNLHRDGKLVMAADPRLEGEFDEGEMRRILLVGLACSHPDPLVRPTMRGVVQML VGEADVPIVPRTRPSTSLSTSHSHLLLSLQDSVSDCDGIITISTSSSENSFNGGDIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 3 | 18 | 16 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 7 | 680 | 674 | 0.0 | – | |
| PANTHER | 7 | 680 | 674 | 0.0 | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Gene3D | 20 | 250 | 231 | 3.3E-64 | – | |
| SUPERFAMILY | 21 | 245 | 225 | 9.33E-60 | ||
| Phobius | 23 | 302 | 280 | - | – | |
| Pfam | 24 | 244 | 221 | 3.9E-55 | ||
| CDD | 39 | 239 | 201 | 2.00075E-83 | ||
| MobiDBLite | 245 | 290 | 46 | - | – | |
| Phobius | 303 | 329 | 27 | - | – | |
| TMHMM | 306 | 328 | 23 | - | – | |
| Gene3D | 327 | 440 | 114 | 2.2E-32 | – | |
| Phobius | 330 | 697 | 368 | - | – | |
| SUPERFAMILY | 347 | 666 | 320 | 3.83E-81 | ||
| ProSiteProfiles | 365 | 649 | 285 | 38.76 | ||
| SMART | 365 | 640 | 276 | 1.4E-37 | ||
| Pfam | 366 | 575 | 210 | 1.1E-50 | ||
| CDD | 371 | 640 | 270 | 6.01153E-95 | – | |
| ProSitePatterns | 371 | 394 | 24 | - | ||
| Gene3D | 441 | 646 | 206 | 3.6E-62 | – | |
| ProSitePatterns | 484 | 496 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi1g1v0098900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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