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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0121000 |
| Transcript ID | LotjaGi1g1v0121000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DAMAGED DNA-BINDING 2; TAIR: AT5G58760.1 damaged DNA binding 2; Swiss-Prot: sp|Q6NQ88|DDB2_ARATH Protein DAMAGED DNA-BINDING 2; TrEMBL-Plants: tr|I1MBA5|I1MBA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0121000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19055314..19063396) extracted from Lotus japonicus Gifu genome v1.2.
ATTTAGAACATGAATAACTTTTTTTTTGTGAAAGAAACATGAATAACTAAATTGCAAATTATAGAAGTTTATTAGGGAAG TACTAAAATTAAGCCTAGCTTTTTTTTTTGAAAATAAATTAAGCCAAGCTAAAAGAATATATGAAACATCTCCATATTAA ATTGGTATGACACAAATGCCCTTAGAAAAAGCATTCATATTGACGAGTTGATCGAAAGAAACATGGACATTTCTGTCATT TACCATATGCCTGACGTGTTGTCCCCCAAATCCAACAAAAACAAGTGGTGAAATCGTGTTTTATTCCCTGTCTGTCCACA TTCCCATCTCGAAACTCCCAATCCTAAGTCTCAAACCCTTCTTTTGTCTTCTCTTGTGTCTTTCTATTTTCCCGCGTCCA TTGTCACCGCCACCAAACCTTGCTCCTTGCAATGGCTCCAGTTACTCGAAGAGTCCCGTTTCCAAAGGTTGTCATCGAGA GAGACACTGATTCTGAACAGAGTTCATCCGAAGAAGAAGAAGAAGCACTTGAAGATGATGAAGAAGAAGCACTTGAACAT GAACAAGAAGAAGAAAATGGGGTTGCTGAAATTGGAAAGAATGAGAAACTGGAAGTGGGTTTGGACGCAAACAGGAAAGG GAAAACACCAATCACTCTGCCTCTCAGAAAAGTTTGCAAGGTTACTCATTTTGAGAAAAAAAATTAAATTTGTGACGGTT TATTTTGCAAAGTTGCTTCTTTTCTTATTAATCTTGGGACTATTTTGTGATAATGGTTTCTGGGTATTGTTGTTGATGGT GTTCTAGGTGTGTAAGAAGCCTGGACATGAATCAGGCTTCAAGGGTGCTACGTATATTGATTGTCCAATGAAGCCTTGCT TCCTGTGTAAAACTCCTGGTAAGTCTTGTCTTCCTCACACTAGTGAATGTGGTATTTTCAAAATGCATCACCACATTTTT TTTAAATGTATTTCTTATTTAAATGCTTTGATTGATTGATAGTATTTTACTCTTCATTTTAGTTAACAAGGATTAGGATT GCTATATTTGTCATCTACTCATCTTGTTTCATTTGTTATGTGGCTTTCTTGTAACTTGTTAATCTCTTGGATTTATTTTT GGCTTATATATTTTTTTTATCTGTTGTGCTTTTGATTTGAAGGACATACTACTTTGACTTGCCCACATCGGTTCAGTACT GAGCATGGAGTTGTTCCGGCGCCCCGGAAAAAAACATGTAAACCTTTTGAATATGTGTTTGAACGCCAGCTAAGACCAGG CATTCCTTCAGTAAGCCTATGCTTATGCTAACTATTTGTTTGATTTCCTTTTTTTTTCTGTTGCGAAAAACATTTCATTT TGTCCTATGCCATTATTGTGCTGCTGGGAACTCTCTACCTGTTTCAATGTGGTACTGTTATAATTTTTGTTTTAAGCATC AGTTTGATGCGATTCTCGCTTTGTGCATCTTGAATTAAACTAAACAAGTTAGTTTTGGCCCATTTTAGTTTATTTTGTTT TTAATTTGCTTAATGTTGGGAATAAATTCTCATGCATGTCCATTTTGCTCTTTAGTTAGTTATTATGATCAGGCATAACC ATAACTAGTGAAGGTAATACATACCATATCTTAGTTTGGTGTATTGAGATAAGTTAGTTAGTCTCATCAACTTCTAATTT CAACATGGAATCATGGTAAAGCTACCAAAATCTTCCAAGTTTGATTTGGTTATCCTTATAGTTGTTTTCGGAATCTGCAG GAAATCATGCCTGTATTTCTCATTAACAATTATCATGCTTGCCTCAATCTATTTTAAGCTCTCTTGGTTTCCCTTGCAAT AGTGTATATCCTTTTTTAAGTCATACTCACCCAGCAAATGCTCTTTCTACCTATGTTGTCAATCCCAGTTCCGAGCTTGT CGCGGCCAGCCTCAAAACTGGGATAGCGGAATCCCGGAAAGCGGGATTGTTGGGATAGTGAATTATTGTCTATATTTTGT ATAATTTATACCATATATATATATATATATACATACGAAATCAATTATAAATAGAGGATAGAACAAAGGAGAAGAGGGTC GAAGTGGGTAGAACATAGGTGACACTCGCCAGAGAAAGGTCGGAGGTCCTTTCGTGGTGGTTGTCAGTCGGTTCAGGATC GAAGAGAGAGAAGGTGCAAAGATAGAACATAGAGAAGAGGGTTGAAGTGGGTAGAAGAGAGAGAAAGGTTGAACAAAATC AAAGTTCTAGGGTTTTTTCTGTTGTGAAAACCTGGAAATACCCCTAAATAAAACCCCCATCGTTTACATTTGAGGGGCAT TTCTGGAAAATTGTTATCCTGCCGGGATGGCCGAGACAGTTGACTGGGATGGGATGGGAAAATTCGTCCTATGGCATGGC TGGGATGGGAACCTGGGATCCCGCGAGATCCCGCCCAGATTGACAACTTAGCTTGCTACATTTACTGAATGACATGTGCT TCAAGTTGCATCAGGTTCATAATATTCTACATTCTTTGTTAGCATCGTAGCATTAAGGCATATATGATTTACTTATGCTT GTGATCCTTTGAATCTTATCGAGGTGAATAATTGGCAATATTATATGAATCATTGAGACCTGTTCAAACATGTGTCATTT TTATGACTCCATATTCCATTATGATTATGTATTCCCTCTTGTTCGATGTTATTAATTAGAGCTGGTATAATGAGATCCTT ATGATGCTTGTATAATTAGATCGTTGTCATAAGTTTAATGTTTTTCCTCCCTTTGCAATAGATCAAGCCCAAATATGTGA TCCCAGACCAAGTGAATTGTGCTGTCATCAGATATCACAGCAGACGGATAACATGCTTGGAGTTTCACCCCACAAAGAAT AACATCATATTATCGGGAGACAAGGTTATTACATTACATATTTATGATAAATTACACTAATTACACTAATTGGGATTAAT GTCAAGGTTGCCTTCTTTTATCCACTCATTTCTTGTTTTTTTCCTGCTTTGGTCCTAAAAGAAAGGACAACTTGGAGTTT GGGATTTTGTTAGGGTGCATGAGAAGGTAGTCTACGGGAACATACATTCTTGTTTACTGAATAACATGAAGTAAGTTGTT TTTATGATACCATGGCCTTGTAATTATCTCATTTCCCTCCTTCATGATTGCATTTATTTGTATGTCTTGGTCTGGACTCC AAATGATTGTTTCTAAATGGAAAACTTTGTAGGTTTAATCCTACAAATGATTGTATGGTCTATTCTGCATCCTCAGATGG AACCATTAGTTTTACCGACTTAGAGACTGGAATATCATCCTCTCTAATGAACCTGAACCCTGAAGGATGGCAGGTAGTAT TTTTTTTCTAGAAATTTTTTCTTAAATTATTCTGTAATCTTGTCTTTTAACTTCTTGACTACATGGATATGACCAAAGAT AATTCTGGAAGGCTCTTTGTTAATTGTAATATCTGAAGACTTCGCCTATTATGATGTTCTTCTTTGCCATGCCATTCATT TCCAGTTGTGTTATACTGTTAGATCATGCTTGATTTTATAATTGTGGGGTTTATTTTAATTTTTTGGACGGGAATTCCTG GTTTGGGGAGCAAAGGGCTATATTAGTGGCTGACAGAAGTGAGAGAACGAGCCAAATGAATCTGGTTGAGTTTTTGACTT TTACTAATTGGAAAGATGTGTAACATCATTTTTCTTGCCTTTGGCTTTTACTTTGGGGAATGAGGTGGTGGACTGTGGTA ACAATCAATGTGCAAAAAGTAGAAGAAGATTCATTGAAGTTTTCTGTATAAGTTTATCTTGTTCTTTTGCAATAAAAGGC TTACTTGTATATTTTGTTTTCATTAGGGTCCAAGCACTTGGAAGATGCTCTATGGCATGGATATTAACTCTGAGAAAGGT CTTGTACTTGTTGCTGATAACTTTGGTTTTCTTCACTTGTGAGTAACTTCTTTGTGCCTTCCTTCTTTCCTGAAATTATT TAAGATACTGAACGATACAAGTTGTATATTATAATAAAGTTATGACTGATTGCATCACTCTTGGAAAGCTCACTTGATTT TTATGCTTCACTGCTAGTTTGTTATACTTCATTGTTGAGATATATTAAGAGATATCTATTAGGATATATCTGTTTGAGAT AGATTTGTTAGGATATGGTTTCTTACAGGATTAGATTATATATTAGAGTAAAATACACTCCCCTCCCTTGACACATTCAC TTATTACACTCCCCTCTCCTCTTATTTTAAAACATATTTTCCCCTCCTCTATTAAATAAAAATATATACTTTTTACCCTA TTTTTGGATTTCCTGTTAACCTCTGTTAACCCCCACCTTTAATGAAAGTTTTTAGGTCCAAATTACCTTTTTTTACTCCC CTTTTAACTTACTCCCCTGTACCTCGTATTCATCCGTCTCCATGAACCCAAATCGGCAAGCACAAAAAAAACGTGAAGAA TACGATCCACTCCTCTCCCCTGCTGATTGATTCTGCTCACCATGTCCTTTGCCAGATTTTTTGTTGTTTGGCTTGAAGAT TTGAGAGAGAGCAAAATAGCTTAGCGTTACGAAAGAAATATGCTTAATTTATTCAGTAAAAATGCCTTCCTTTAACATCA TGTGAGTTACCACAAAATTTTCATTTCCTTTTTTCACCATTGAAACCAATGAGCAGGAGATACACAATTACACAAAGCAC TTATTCACTAATTCTTCAAGAAGATAATTAAGCAAGCCAAGACCCTTACTAGTTACTAGTACTAAGGCAATAGGCAATAT TTTTCCCTGAGAAGATAAGCAGATCCTTAGAAGGAGAAAATATATAGGACAATAAAATTAGTGGTGGGGGTTTGGTTCAT AGATACAGGGGAGTAAATTAAAAGGGGGGTTAAGAAGGGTAATTTGGACCTACGAACTTTTATTAACAGTGAGGGTTAAC GGAAAATTTTAAAATAGGGTAAAAAGTATTTATTTTTATTTAATAGGGGAGGGGAGAGTGTATTTAAAATAAGAGGGGAG GGGAGTGTAATAAGTGTATGTGTCAAGTGTGGGGAGTGTATTTTACTCTTTATAATATTATGATTTTGTTATGATAGATT AGGATTAGAGAGATTTTATTGTTTTAGAGCTAGTAGTTGACTAGGAAACCTATAGGAATCTAGTCTTTAAATATTGTACT TCTGAATCAAGTATTATCAATTAATTAATGAAGTATCAATCAAGTATTAACAATTACTTAGAATACTTTCATTTTCTCTC TTCATAAACTAAGAGTAAATCCTATAATTTCAACATTTACCGTCTTGACATGTCTCTACTTATATTTAGTGTTTTTCTGT AAAAGGATATATTATTACATGAGTGTTCCATGTGCATGGTGTAATCTTTGAACTATCAATGCTTATAGTCCTCAATTGAA ATTTACATCAAATTTAGCTGGCTATAAATTTTGAACATGTTCTTTTTTCTTAATTTTCTTTTCATTGTATAGTCATTCGT GATAAGTTAGTGGTTATCATGCGATGTGAATGCTCACACCTGTCCTAACAACGCACTCTATTGATTATCTTACAACCTAT TGAGTTCATTAACTATTTGAAGTTATTTGAAAACTTGATATTTGCTGTAAGTAAGGCCTGTCTTTATTCAATTCTAAGGG AGTTTAAATATTCCAAGGAAAACATGAGAACATTTATAATCAATGTTGTTGTTTTTTTGTTCTTGGTTAGGACTTAGGAC TAAAAATCTTATCCCTCTAACATGTAGCCATGCTTTTCACTTGTGAAAGAAATTAGATAAGCAAATATATGTGATCTGCT ATTGCATTTTTAGGGTTGACATGCGCTCCAACAACAAGACTGGTAATGCAATTTTGATCCATAAAAAAAACACCAAAGTT GTTGGTATCCATTGCAATCCAATTGAGCCAGATATCCTTTTGACTTGTGGAAATGATCATTATGTGAGTTCTTAACTTCA ATAATATATTAAAACTATTTATTTGATATATGAACATCTGTTTCAAGCTGGTCTGTACTAGCCTTTGAAACATGTAATGG TTTGTTTTCTAGGCTCGCGTTTGGGATATACGTCGAATGGAAACGGGATCATCCATTTATGACCTTAAGCACAACCGTGT TGTTAGCTCTGCATATTTCTCTCCGGTATCTGGGAACAAAATTCTTACTACATCACTTGACAACCGTCTTCGTGTATGGG ATTCTATCTTTGGTAAAATGGACTCTCCTAGCCGAGAAATCGTACATAGTCATGACTTCAATCGGTATTTGACCCCGTTT AAAGCTGAATGGGATCCAAAGGTATTTTCTATTGTAAAGTTTGTGATTTTTCAATCTGTTATACTGGATAATCTAGTATC CTTATGGTTGAAGATAATTGATTCGATTGTTGTGCAGTTGTTTACGACATTTCCTTTATTATTTTCTTCTGTTATTGAGG AACGTTATTGTTTATGTTATTGTAGGATCCGTCAGAGTCCCTTGCTGTTGTTGGTCGTTATATAAGTGAAAATTATAATG GGGCTGCTCTGCATCCCATTGATTTCATAGATGTCAGTACAGGGAAATTGGTTGCTGAAGTCATGGACCCAAACATCACA ACCATCAGTCCAGTGAATAAGCTGCATCCAAACGATGATATCCTGGCATCTGGGAGTTCTAGGTATAAATTATCTTGCTG ATCCTAACGCACTAGAGAATGACGTTTTTTATTTTTCTACTTTTTATTTATGAAAAAAGATCTGTTCATGAATTCTTTAG GCTGGTATGAAAAAAGATCTGTTCATAAATTATCTTTTCAAACTTTTTACCATCTTTGGTGATCTGCAGTGTGTTTGTGA ACACGTTCCACCACAACAAAACGCCAGTTTTTCTAATCCATGAATTTCTTCCGTCTCACAAATGTAGCATGGAACGTGAG CAAATGTGTTCGCAAACACACTCATAACCTAAGTTGGAATTTTAAATTACAAGTGCTCTTTGATGATCTGTTTTGGAAGC AGTATTTTACTTTCCTCCTAAGAGTATTGCTATTAAAAGATGAAACTGATATTGTATTCATTTCTGACTCAGTTCAGTCT CTTAGGGCTGGATGCATAAGTATATCATTATACAAATTATCCAATGTTTCTAGTTACGACTATTAAATATGCTTGGACTA TATATATAATTATATATATATACATATATGTTTGTTAGATTCAGGAATTGACTTCAACTATGGTTTTAGAAAGGTATAAA ACCTTGGGGTCCTAAAGTCTGATTGTTAATTTGGTTCTTGGACTTACCTGGTATAATTTTTCAGTTCTCTGTTCATTTGG AAGCCCAAAGAGAAGTCTGAGCCTGTCCATGAGAAGGATGAAAGCAAAATTGTGGTTTGTGGAAGAGCTGAGAAGAAACG TGGTAAGAAACGTGGTGCTGATACTGACGAATCCGATAACGAGGGATTCAATTCCAAGCTTAAGAAGTCCAAATTCCAAA AGACGTCCAAATCCCAAAAGACTAAATGGAAATTGTCTATTAAGGATTAGTGCTGAATTATGAAATAACTCCTGTAAAGC GTATTTAAGATGTTCCCTTTTTTCAGATATTTTGAATGTCTTCCAATCCAACTGCTAACCCTGTATAGGTGGTCAAGCTC CCCTCCTAGTTTTATTTTTTTGGTGCTGGATGGGTGCTGCTATCACAGTGAGCTATCTCCCGTGGCTTTCTCCCCTTGAA GGAAGATTTTGTATGCTTGTCTTGGAGCCATGACTCTTATGTGATTATTCTCCTTTTGTAGTGTTTTGTGTATCTTATTA GCAGAAGACAATGAACCTTTTTTGTTGATGTTTCTAAAGGTAGTCTTCAGGCTTTAGATTGTTATTCTATCTTCATGCTT TTATGAGCTTATCTTTCTTTTAGTATCTTTGAGTGCTTAGAGGCATAGAAGCATGTACTAAACCTAGAAAGCTCAATGCT TCTAGATGCACTATAGACCGGATTGGATCAGATTTGAATTTATAGACAAATCATTAGGTGACAAAATAACAAAATTCATG AGA
CDS sequence (LotjaGi1g1v0121000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCAGTTACTCGAAGAGTCCCGTTTCCAAAGGTTGTCATCGAGAGAGACACTGATTCTGAACAGAGTTCATCCGA AGAAGAAGAAGAAGCACTTGAAGATGATGAAGAAGAAGCACTTGAACATGAACAAGAAGAAGAAAATGGGGTTGCTGAAA TTGGAAAGAATGAGAAACTGGAAGTGGGTTTGGACGCAAACAGGAAAGGGAAAACACCAATCACTCTGCCTCTCAGAAAA GTTTGCAAGGTGTGTAAGAAGCCTGGACATGAATCAGGCTTCAAGGGTGCTACGTATATTGATTGTCCAATGAAGCCTTG CTTCCTGTGTAAAACTCCTGGACATACTACTTTGACTTGCCCACATCGGTTCAGTACTGAGCATGGAGTTGTTCCGGCGC CCCGGAAAAAAACATGTAAACCTTTTGAATATGTGTTTGAACGCCAGCTAAGACCAGGCATTCCTTCAATCAAGCCCAAA TATGTGATCCCAGACCAAGTGAATTGTGCTGTCATCAGATATCACAGCAGACGGATAACATGCTTGGAGTTTCACCCCAC AAAGAATAACATCATATTATCGGGAGACAAGAAAGGACAACTTGGAGTTTGGGATTTTGTTAGGGTGCATGAGAAGGTAG TCTACGGGAACATACATTCTTGTTTACTGAATAACATGAAGTTTAATCCTACAAATGATTGTATGGTCTATTCTGCATCC TCAGATGGAACCATTAGTTTTACCGACTTAGAGACTGGAATATCATCCTCTCTAATGAACCTGAACCCTGAAGGATGGCA GGGTCCAAGCACTTGGAAGATGCTCTATGGCATGGATATTAACTCTGAGAAAGGTCTTGTACTTGTTGCTGATAACTTTG GTTTTCTTCACTTGGTTGACATGCGCTCCAACAACAAGACTGGTAATGCAATTTTGATCCATAAAAAAAACACCAAAGTT GTTGGTATCCATTGCAATCCAATTGAGCCAGATATCCTTTTGACTTGTGGAAATGATCATTATGCTCGCGTTTGGGATAT ACGTCGAATGGAAACGGGATCATCCATTTATGACCTTAAGCACAACCGTGTTGTTAGCTCTGCATATTTCTCTCCGGTAT CTGGGAACAAAATTCTTACTACATCACTTGACAACCGTCTTCGTGTATGGGATTCTATCTTTGGTAAAATGGACTCTCCT AGCCGAGAAATCGTACATAGTCATGACTTCAATCGGTATTTGACCCCGTTTAAAGCTGAATGGGATCCAAAGGATCCGTC AGAGTCCCTTGCTGTTGTTGGTCGTTATATAAGTGAAAATTATAATGGGGCTGCTCTGCATCCCATTGATTTCATAGATG TCAGTACAGGGAAATTGGTTGCTGAAGTCATGGACCCAAACATCACAACCATCAGTCCAGTGAATAAGCTGCATCCAAAC GATGATATCCTGGCATCTGGGAGTTCTAGTTCTCTGTTCATTTGGAAGCCCAAAGAGAAGTCTGAGCCTGTCCATGAGAA GGATGAAAGCAAAATTGTGGTTTGTGGAAGAGCTGAGAAGAAACGTGGTAAGAAACGTGGTGCTGATACTGACGAATCCG ATAACGAGGGATTCAATTCCAAGCTTAAGAAGTCCAAATTCCAAAAGACGTCCAAATCCCAAAAGACTAAATGGAAATTG TCTATTAAGGATTAG
Protein sequence (LotjaGi1g1v0121000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPVTRRVPFPKVVIERDTDSEQSSSEEEEEALEDDEEEALEHEQEEENGVAEIGKNEKLEVGLDANRKGKTPITLPLRK VCKVCKKPGHESGFKGATYIDCPMKPCFLCKTPGHTTLTCPHRFSTEHGVVPAPRKKTCKPFEYVFERQLRPGIPSIKPK YVIPDQVNCAVIRYHSRRITCLEFHPTKNNIILSGDKKGQLGVWDFVRVHEKVVYGNIHSCLLNNMKFNPTNDCMVYSAS SDGTISFTDLETGISSSLMNLNPEGWQGPSTWKMLYGMDINSEKGLVLVADNFGFLHLVDMRSNNKTGNAILIHKKNTKV VGIHCNPIEPDILLTCGNDHYARVWDIRRMETGSSIYDLKHNRVVSSAYFSPVSGNKILTTSLDNRLRVWDSIFGKMDSP SREIVHSHDFNRYLTPFKAEWDPKDPSESLAVVGRYISENYNGAALHPIDFIDVSTGKLVAEVMDPNITTISPVNKLHPN DDILASGSSSSLFIWKPKEKSEPVHEKDESKIVVCGRAEKKRGKKRGADTDESDNEGFNSKLKKSKFQKTSKSQKTKWKL SIKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 57 | 57 | - | – | |
| PANTHER | 5 | 557 | 553 | 5.4E-244 | ||
| MobiDBLite | 22 | 46 | 25 | - | – | |
| Coils | 26 | 47 | 22 | - | – | |
| SMART | 165 | 205 | 41 | 0.002 | ||
| Gene3D | 170 | 500 | 331 | 1.2E-84 | ||
| SUPERFAMILY | 171 | 506 | 336 | 4.48E-35 | ||
| ProSiteProfiles | 172 | 400 | 229 | 16.665 | ||
| ProSiteProfiles | 172 | 205 | 34 | 10.107 | ||
| Pfam | 175 | 205 | 31 | 0.12 | ||
| SMART | 210 | 249 | 40 | 4.7 | ||
| SMART | 305 | 346 | 42 | 0.49 | ||
| ProSitePatterns | 333 | 347 | 15 | - | ||
| SMART | 352 | 391 | 40 | 1.1E-4 | ||
| ProSiteProfiles | 358 | 391 | 34 | 9.907 | ||
| ProSitePatterns | 378 | 392 | 15 | - | ||
| SMART | 464 | 496 | 33 | 59.0 | ||
| MobiDBLite | 505 | 543 | 39 | - | – | |
| MobiDBLite | 505 | 564 | 60 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Damaged DNA binding | Interacting selectively and non-covalently with damaged DNA. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Cellular component | Cul4-RING E3 ubiquitin ligase complex | A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein. |
Expression pattern of LotjaGi1g1v0121000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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