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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0230500 |
| Transcript ID | LotjaGi1g1v0230500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine proteinase; TAIR: AT5G50260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P25803|CYSEP_PHAVU Vignain; TrEMBL-Plants: tr|I1KC88|I1KC88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0230500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:53964568..53970290) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTCCATTACGTTTTATCACTTCTTTTCCAGAAGCGATTACGTCAGTTATTGTTATGTTATAAAAGATTATCAGAACG TTCCACTACACTGGCAACACATGATGCAACAAAAACCAGACGTAAACATGCTTCTCACTCTCCTACCATGCTTCTGTTAA CAGAATAGCGTGATCAGCATGCAAAGAAAAGATGATCCTTCAAGCATACAATTACAGGCCCTGACACAAACACAAAATCA CACAGGTTTAGGCTTATCACACCTAACTTACTATAAAAAAATTAACACAAAAAACAAACTCCCTCAAATTTTCTTGATGC ACTTATTGAAGCAGTTGCTTTTGCTTCCATACCACAACAACATAAACATATTAATTTTATCCTCTTCTCCATGATTCTAT AGTGTCACATAGTCACAGCTTGGCATATGTTCATCATTGCACATTGTTGATCCCCATAAGAAACCTGTTACTTACAATTT CCTTCTCTATTGTTAATCAATTCCTTCACAAGCTTCTTGTTTCCATTCCCCTATATAAACCCTCCCCTGCTTCCCCTGTT TTCCACACATCAAAACAGTTTCCAACAACTACAACAATTAAACATGAAAATGAAGAATCTCTTATGTGTTGCTCTGTCCC TTGCTTTGGTTCTTGGCCTAGCCAAGAGCTTCGATTTCCACGAGAGCGATGTGGGATCGGAGAAGAGCCTGTGGGACTTG TATGAGAGATGGAGGAGCCACCACACGGTTTCTCGGAGCCTCGATGACAAACACAAGCGCTTTAACGTGTTCAAAGCCAA TGTGATGCATGTCCACAACACTAACAAAATGGACAAGCCTTACAAGCTGAAGCTGAATAAATTTGCAGACATGACCAACC ATGAATTTAGGAGTGCCTATGCTGGATCAAAGGTTAATCACCACAGAATGTTCAGAGGAGCAACACGTGGGAATGGGAGC TTCATGTATGAGAAGATTAATAGAGTTCCTCCTTCTGTGGATTGGAGGAAGAAGGGTGCTGTCACTGATGTAAAGGATCA AGGCCAATGTGGTAAGCCAACTAGTTTACTAGTCACTAATAATCATATAGTGAAGTCATAATCATGGTGGACAACACAAA AATAATGAAAATTGCTTTTGTTCACCATAATTCCGAACAGGGCTAAAGTTGAGCTATATGATTATAAGGATCAAAATATG CACTTAATTATATTTTTGTTGCTAGTTTTAGGAATGCATGATTTTGATCCTTATAGTTTCAATTGCCTCAATTAAATTTT TTCTTACTTTCAAAATTGTATAAATTTGGTCGATGTGTTAACTTATCATCCAATAACTAACTGAAAGAATGATATATATC ACAATTTATTACGTAGAAAGTAACATAATGTTTTAACATAGTAAAAAAACGATGAAGCACAACAATTTTTCATTGATTAT TGGATGATGAGTTAATTTTACAACAAACTTTAATTCAGTTTTGAAAGCAGAGGGAGTTAATCGAAGTAATTGAAACTATA AGGACCAAAATCACACATTTGTAAAACTGTAATAATAAAACATACAATTAATTCATGTTTTTATCTATAAGGAGGATTTG AGGTGAATAATATATATGACTTTTAATAACTTCAATATTGTTTTTCTTTAAGCATAAATTCAATGAAAATCATCTTGTTC TTAATCTCTTTCAGGAAGCTGCTGGGCGTTTTCAACTGTTGTAGCTGTTGAAGGCATTAACCAAATCAAGACAAATAAGC TGGTCTCATTGTCTGAGCAAGAGCTGGTGGATTGTGACACTAAAGAAAATGCTGGATGCAATGGTGGGCTGATGGAATAT GCTTTTGAGTTCATCAAGCAAAAGGGAGGCATAACAACAGAAAACAATTACCCTTACAAAGCAAATGCCGGATCTTGTGA TGCATCAAAGGTGCATATTGCATTATGCTAAACTTTTATTAAACCAGAATCATTGAATGATAATTAGAAGAACTTAAAGA TGCCAAAATTATTCATGATGCAGGAGAATGATCCAGTAGTTTCAATTGATGGCCATGAGACTGTTCCTGCTAACGACGAA GCCGCGTTGCTCAATGCTGTTGCCAACCAACCTGTATCTGTAGCTATAGATGCTGGTGGATCTGATTTCCAATTCTACTC AGAGGTATCTAATTCACATTTTCTTTTTATTCAACATAAGAAAATTTATTAAAAGAGTACATAGGCTAGACAATCCCATA ATACAAAAAACAAGGGTTCAAGGACTAACCCTTACAATGGCATGATTTCATTCATTGCAAATGATTAATGTAAATCAGAA AAAGGAAAAACATCTACTTATCTAGAGTAAAAAAAATTCAAAGGCAAGTATAACCAGTATTGTTAAAGCACTAGTTCCAG ATTATTGGTTGATAATATTGAATCAAATGAGTGTCTCAATTTTGTAAACTATAATGATTACAGGGGGTATTTACTGGCGA TTGTGGCACGGGGCTTGATCATGGTGTAGCGGTTGTGGGATATGGAACAACTGTTGATGGAACTGACTACTGGATAGTGA AGAACTCTTGGGGGCCAGAATGGGGAGAACAGGGTTATATCAGAATGCAGAGGAACATATCTGACAAGGAGGGGCTATGT GGCATAGCTATGGAGGCTTCCTACCCAATCAAAAACTCCTCTGAGAATCCAAAACCACGTTCATCTCCTAAAGATGAGCT TTAATCTCATGATCTCATGAGCTAAGCTAGAAAAAGTTGTTTCAGATTTGATGTCAATGTATTCATCTACATATTTATGC TTATATCTCCTAGCTAAATAAACATATCTTTCAATTTGATTTCACTGCTTGCAATTTCTGATGTAAACTCCTTGCTGTAG TTGTTAAAAGTGTAGTATAACGACTCGAAAAGCATTATTCAACACAATTATGTTTCATATCATATCATATTCACACACAA AAAAAGATCTTGTTAATAGAGAGATGACTAAAATTCCAGGAAATACCCACATTGGGCTAATTAGAAAATCACAAGTGAAA GTGAATTTTGAACATCACATCTTTAACCCAAAACCATAGCAATTGTTCTCACAAGGACTAGTCAATTCCAATAAACATTC AATTGGAATCAATATCTTTATTATGCATAAACCATAACTTCATTATTTGTAAGTAATACTAGAAGTTCATTAACCATAAC ACCTAATGGGATCAGTGCAACCCTTTTCAGCAGATTGTTTGAGGCCTTTACCTCCACCCTTCTCAAGATATTGCTGATGG TATTCCTCTGCTCTGTAGAACCTCTTTGCTGGAAGAATTTCTGTCACAACCTTCCCCTTCAATTCCAATTGCTTAGCTTC TTTTGACTCCTGAGCTAAACGAGCCTGGGTTTCATTGTAGTAGTATATTCCTGATCTGTACTGTGTACCCACATCACCTC CCTGCGTATATACAAAGTTAATGTTGAGGTTAACAAACGAGATAACATGCATGTCTATACCTTGAGATGTGTATTTAAGT GAGGAAATTTGGGTTTAATAATTCATCATCCAATCACATTAGAAATAGGATTACCTGGCGATTGGGTTTAATAATTCATC ATCCAATCACATTAGAAATAGGATTACCTGGCGATTGAGAGCGGTTGGGTCAATTCGAGCCCAAAAGACATTGAGGAGAT TGGTGTAGGGGCAGAGTTTCGGGTCGAACTGGATCCGAACCAACTCCGCATGGTTGGTGGTTCCGGTGCAAACCAATTTG TAATCCGGGTTATCATGGTGACCCTGGGAATATCCAACCTCAGTCTTCACCACACCTGCAATTCGTTGAAATGCGAGCTC CGCGCCCCAGAAACAACCCGCTCCGAACTCTGCAAACTCGTGATCCGGGTTTATTGGAGTATCCGAATCCAGTTTAAGAG CAGGGTTGGTGTCCAAATCACTCGTAGCCATTGTAACTCTTCTAACACAATTTTCAAGTGTGCTAGATGAAGAGAGAGGG TGAGAGGCCACTATTTATTTAAATTGAATCGTTATTTATTTCATAGTTTTGCTAGAAAGGCTGTTAATTAATTAATATTA ATAACGCCAAAAAAGGAATCAATTTTTTTCCACTAGTTTTTGGCGCTATTAATAACAATGGAAAATTGAAAAATGATCCA GGCCACAAAATTGGCTATGTACATCACGTTGATTTGAGAGGTTTTTAATAATTTATTAAATGTTTAACTTATGTGTCCCG GACAATAAAAACCATTAATTGTATGTTGTTTTTGTGTTTTCAAGTGGCTAAAAGCAGCCAAAGTCAGATAAAACAAAAAC AAGACAAAAAATTTGTGAAAATACAAGAATCTCAGAGGACCATTTATTGAACAGAAGTGAAGTATAGGGACTTACTTGTA AACACTAATAGTTAGTGCTCATAGCTGAGTTAACTTTTGTGGTTGAGTGTAGGCCTCGATCTTCAACTTTTTTCCTAAGC TCCTTTATCATCGTAGAGTCAGACGATGATATTTTTTCTTGAGCTTTGTCTTTTCTTTGTGTAGACGATCATTGCAGATA TGACTTTTCCTTAAAGGGATCGTCTGAGTGGAAGACTAATTACTTCGACTCTCTTTGTTTATCCCAAATTCCACTTCATT TGTAATCTAAGACAAACTAGTAGATCATAAGTTCTCAGTCTTTGATTATGCTTGTTTGTCCTGAAATTCAATCATATGAA GTTTTCGAGATGTAACAAGTAAGTCACGTTTGATTGGCTCCTGAAAAATAAACAACAAGGATTCATTAGATTGTATTTAG AGACTCTTGAAAATTGTTATCATTCAAAACAAGATAGACGATGAAGGCGTTTGAACTTAACAGAAGAATCATCTGAAGAA GAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAGGAAGA AGAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAG AAGAGGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGATGAAGAAGAAGAAGAG GAAGAGGAAGAGGAGGAAGAAGAAGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAAGAGGAAGAGGAAGAGGAGGAAGA AGAAGAGGAAGAAGAAGAGGAAGAGGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAG AGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAG GAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGA AGAAGAGGACGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG AAGAAGAAGAAGAAGAAGAAAGCGAATTGGAACATGAATAGTGGTGATGACGGAGAAACGTGCGGACTTAGAATGCTAAA ATAATTGTTTAGGGACGACTTTTACACAAAAGTCATTCGTGGGGATTAAATGTGTTTTTATAGTAAATGGGCTAAGGCCG TAATTCTTTTTTTTTGGTCGAAGGGAAAATGATATATTGATAA
CDS sequence (LotjaGi1g1v0230500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATGAAGAATCTCTTATGTGTTGCTCTGTCCCTTGCTTTGGTTCTTGGCCTAGCCAAGAGCTTCGATTTCCACGA GAGCGATGTGGGATCGGAGAAGAGCCTGTGGGACTTGTATGAGAGATGGAGGAGCCACCACACGGTTTCTCGGAGCCTCG ATGACAAACACAAGCGCTTTAACGTGTTCAAAGCCAATGTGATGCATGTCCACAACACTAACAAAATGGACAAGCCTTAC AAGCTGAAGCTGAATAAATTTGCAGACATGACCAACCATGAATTTAGGAGTGCCTATGCTGGATCAAAGGTTAATCACCA CAGAATGTTCAGAGGAGCAACACGTGGGAATGGGAGCTTCATGTATGAGAAGATTAATAGAGTTCCTCCTTCTGTGGATT GGAGGAAGAAGGGTGCTGTCACTGATGTAAAGGATCAAGGCCAATGTGGAAGCTGCTGGGCGTTTTCAACTGTTGTAGCT GTTGAAGGCATTAACCAAATCAAGACAAATAAGCTGGTCTCATTGTCTGAGCAAGAGCTGGTGGATTGTGACACTAAAGA AAATGCTGGATGCAATGGTGGGCTGATGGAATATGCTTTTGAGTTCATCAAGCAAAAGGGAGGCATAACAACAGAAAACA ATTACCCTTACAAAGCAAATGCCGGATCTTGTGATGCATCAAAGGAGAATGATCCAGTAGTTTCAATTGATGGCCATGAG ACTGTTCCTGCTAACGACGAAGCCGCGTTGCTCAATGCTGTTGCCAACCAACCTGTATCTGTAGCTATAGATGCTGGTGG ATCTGATTTCCAATTCTACTCAGAGGGGGTATTTACTGGCGATTGTGGCACGGGGCTTGATCATGGTGTAGCGGTTGTGG GATATGGAACAACTGTTGATGGAACTGACTACTGGATAGTGAAGAACTCTTGGGGGCCAGAATGGGGAGAACAGGGTTAT ATCAGAATGCAGAGGAACATATCTGACAAGGAGGGGCTATGTGGCATAGCTATGGAGGCTTCCTACCCAATCAAAAACTC CTCTGAGAATCCAAAACCACGTTCATCTCCTAAAGATGAGCTTTAA
Protein sequence (LotjaGi1g1v0230500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMKNLLCVALSLALVLGLAKSFDFHESDVGSEKSLWDLYERWRSHHTVSRSLDDKHKRFNVFKANVMHVHNTNKMDKPY KLKLNKFADMTNHEFRSAYAGSKVNHHRMFRGATRGNGSFMYEKINRVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVA VEGINQIKTNKLVSLSEQELVDCDTKENAGCNGGLMEYAFEFIKQKGGITTENNYPYKANAGSCDASKENDPVVSIDGHE TVPANDEAALLNAVANQPVSVAIDAGGSDFQFYSEGVFTGDCGTGLDHGVAVVGYGTTVDGTDYWIVKNSWGPEWGEQGY IRMQRNISDKEGLCGIAMEASYPIKNSSENPKPRSSPKDEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| PANTHER | 2 | 351 | 350 | 3.7E-189 | – | |
| PANTHER | 2 | 351 | 350 | 3.7E-189 | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Gene3D | 14 | 345 | 332 | 3.2E-120 | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 361 | 339 | - | – | |
| SUPERFAMILY | 36 | 345 | 310 | 3.28E-105 | ||
| SMART | 40 | 95 | 56 | 1.4E-15 | ||
| Pfam | 40 | 95 | 56 | 1.0E-11 | ||
| SMART | 128 | 344 | 217 | 9.4E-125 | ||
| Pfam | 128 | 344 | 217 | 8.3E-84 | ||
| CDD | 129 | 343 | 215 | 1.90575E-114 | ||
| PRINTS | 146 | 161 | 16 | 1.5E-10 | ||
| ProSitePatterns | 146 | 157 | 12 | - | ||
| ProSitePatterns | 286 | 296 | 11 | - | ||
| PRINTS | 288 | 298 | 11 | 1.5E-10 | ||
| PRINTS | 304 | 310 | 7 | 1.5E-10 | ||
| ProSitePatterns | 304 | 323 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of LotjaGi1g1v0230500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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