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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0317200 |
| Transcript ID | LotjaGi1g1v0317200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase; TAIR: AT5G09790.1 TRITHORAX-RELATED PROTEIN 5; Swiss-Prot: sp|B9RU15|ATXR5_RICCO Probable Histone-lysine N-methyltransferase ATXR5; TrEMBL-Plants: tr|I1JY36|I1JY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:76429484..76436232) extracted from Lotus japonicus Gifu genome v1.2.
TTATTCTTTTATTTTTCTCTTATTTATTTTCTCCTTCTTCATCCTTCTTCTCCTCATTCTCTCTGCAAATTGCAAAACGT TCATTTCTGCAATTCACCTCTCGAACCTTCTTCTCCGATTCCTCAATTGACCCATGGCTCCTGACACCTCACCCTCCCCA TCACTCAGACCGCTCAGCTTCTGCCGCCGCACGCATGCGCCGGAGTCGCCGGTGCTGAAGTGGAAGTCATTGGAGGAGGT AATGGCGAAGGCGCGCTACACGGTGGTGGAGCGCGAGGATTACGACGACCTCATCTGTGATCAATGCGGCTCCGGCGACC GGCCGGACGAGCTGCTCCTCTGCGACAAATGTGACAAAGGCTTTCACATGAAATGTGTGAGGCCGATCGTCGTCAGGGTT CCGATTGGATCATGGATTTGCCCTGATTGCTCCGGGATGACGAGTGTTAGGAGTAAGGGATTTGGGAATGTGGTTTTTTG TTTTTGTTTTTTTTTTGTTTGAGCTGATTTTATCACCTGTGATGATGAATGTGGGATCGTGTCTATGATTGTTTTTGTGT TTCAGGATTGACGCAGAAGAGAATATTGGATTTCTTCAGGATTCGGAGGCGTGATTTTGCTAGAAAATGCACAGCTCCTT CTAGGGGTAATGTGCTCAAATTCAACCAACCATATTCGTTAATGTCAATTTTTATTCTTGTTCAATGTTTGTTTTTTTTT AGTACAGATGCTGAGTCTGGATATTTGTTGAGTTTCAATCAAATGTTTAGCTTTTTGGGTGTAATGTGAGTTGAATTTGG TTTCTGGGCTTTGCATACCTTGCTGCACTGAATTATATATGAGATAAATAGTTGTGTATTAGAGCATGACTTGTTCTTTT TGGATTATAATAGATGTGGAGTGAATTCATGTAATGATGTTTCACAGTTGTGGTTTAATCTTGTAGACAAATGCAGATTG ATGTGGCCACATTTGGGGCTGCGATGCGATTGTGGGGATTCAAAAACCCTTTTAAGTTGTGGTCGCAATTGCGGTTGCGG TCCGCAATTTATAACTCTGTTCTTTTGTGAGTGCGGCATGCATGTTTGGCTGATGGCTTAACATTGTTGAGACTTATGGA ATGCTCCATGGTTGCAAAGGGTTTCTTCCCTGAATTATGCAGCAGATAGATTGCAAATGTTTCCATCAAAGTTACATGAA TTTTGATCTTATTTTGTTATAGATTGATTATCTTGATTGTTGGTATTACAAGATGGGCAATTAAGTTAGATTTCCAATGC TATGATAATTAGTCTAATCAAAGCTGCAATTACTGGGGGTTGTGAGTTGAGTGAACAGATTGTTAAACTTGTATGTTTTA TTCTCTAAATCCTTTTTTCATGATAGTGACATTAAGGATAAATTATAGTACATACATTGTATTAGATGAAGAGATTCATC ATTTAATTTTGTTTGCATGACTAATTAAAATTACATGTGAGCGTCTACAAGATCACATTTTATTAGATAGCAGATTTTAA TGCATTTGATATCTCATGCTCTTTCATTATGAAACCTGCTCTGTTGTTTCAGGTAAAGGAGGCCAATCAAATGCCTAATG GTTTAGTAGCTGTGCTATAGATCTCTTTTTATAGAGACATGAAAAGGAAAATAAGTCTTAATGTTAGAAAGACCTAGTGG TTAAGTTGGTGTTTGACATTAAGATACATAGACGGATTCAAAAGTGGTCTATGATTTGGTAGCAAATAGAGTTAACATGG CAACTTAACCATTCAAACTGTATTTACTTAATGTATTTTCATAGAAACTAGAAAGATTTTGGATTATTTTTAAAAAATGT TTCATACACCCTGCATTCATATCAGCACTTCATGCACATCTATGAGTACAACACAATAAATGTGGCATGCTAATATATCT GTGGAGTGTGGATATTTGTTGCATCATGTTTTTGTTGAAATTAATGCTTCGTATACTTTTCCTAGACTGTTTACTTTGCT GTTTGTTTCTAGGGCACAAAGAATGTACCATGAATCTCTTGATAATCTTTTATTGGTAAATATGAGGCAAACAGAGTTAT CGTTGGGTTAATTTTTTTGTACTCTTTTTTTCATGTTTTGACATCATGTTCTTAGTATCCTGATAACTTGTAAAGGGAAC TGGTTGAGTTAGGCCTCCCTAATTCTAATATGGTATCAGAGCTAAATCATTATTGATCATGTTATTCATCAATCCTCTAT AGTATCTATCATAGCTATCAAAATCTTTTGCGCAACAGTGAGGGCATTGCAAGGAATTGTGATGGGATTCTAGCTCATTT ATCAAATTGTGCATCAGTTGAAGTTCTTGAAGTTGTTGACAGGCTTCCTGGGATTATTATATTGGAGGAACTACCTCGCT AAAGGATTTGGCCACCTCAATTTATGGGAAGTCAAGCCACTGGAGAAAATATTGCCCTCTACTTTTTTGCAAAAGATGTT GATAGCTATGACTATGATACATACTACAGAGGTTGATGAATAACATGATCAATAATGATTTAGCTCTGATACCATATTAG AATTAGGGAGGCCTAACTCAACCCAAAATCTAACTCAAGAGTTGAGGGTTGCTCGACCCTTTATAAGCACTTGTTTGGTC ATATCTCTAGCCAATGTAGAACTTCTAACAAACTCTTAAGTATAGTTTTGCCTCAATTATGTTCCATGTCTATAGAATTG TAAATATATATTACCTGATTGGCTGGTTATTTTTTCTTCATATATGTTCTGAACTTCTAGATGCTAGGAGGCGTCGGAGA ACTCGACCTCTGGTAGTCCAGAAGAAAAAGAGGAGACTGTTACCATTTATTCCTTCAGAAGATCCTGTCCAGAGACTGAA ACAAATGGGTTCCCTTGCTTCTGCTTTAACAGCATTGCATATGGAATACAGTGATCACCTCACATACATGCCTGGAATGG CTCCTGGATCTGCTAATGACACCGATTTTGAACGTGGTGGCATGCAGGTCTCTACTAACTAATTTTCTTGGCAGATTTTT TACTGCTAGAAGTGTACCGTAACAAACATGCTAATTACCATGGACATCTCCATCATTTTGTAATATTTTTATTTTTTTCC TCTTAGACCCTCTCCATGGAAGACACAGAGACCTTAGAAAACTGCAAAGCTATGTCTACAAGAGGCGAATGCCCTCCCTT TATGGTTGTTTTTGATTCACGTGAAGGGTACATCTTGAACTCATCACCATGAAGTAGAAAATCAATTTATGTTGCCTTAA TATTTAGCAGACTTTCCTTGATATTATGGTGTAGCTATACCGTGGAGGCTGATAGCCCAATCAAGGATATGACATTTATT GCTGAGTACACTGGTGATGTGGATTACATGAAGAATCGAGAATCGGATGATGGTGACAGTATGATGACACTTCTTCTTTC AAAAGAAGAGTCTCAAAGTCTTGTTATATGTGCTGATAAACGCGGAAACCTCGCTCGCTTTATCAGTGGCATCAACAATC ATACCCTGTAAGCCTGTCTCACTTATCTCTTGTTATTCTTGAATAGAAAGATAGAACAGGAGGAACACGGGGGGTTTTAG GGGGTTGTTGGGGGGAATTCTTCTATTTTTTTGTGATACAGCATTCCTTATTTCTATACTTCTACAGTCAATTTTATAAG TTGTTTGGCTCTGGCATGCTCTCTAACGAACTCAAGTTTGTAGGATCCTTATATCATAAAATGCTAATATTTTTTTTTTG TATTACTACTTCCTAAGTTTCTTGTTTTAAAACATATTCAATTTTATTGCAGGGAAGGAAGGAAGAAGCAGAACTGTAAA TGTGTAAGATACAATGTAAATGGTCAATCCCGAGTCTTTTTGGTTGCTATTCGTGATATTGCCGAGGGGGAGAGGCTTTA TTATGATTATAATGGTTATGAGCATGAATATCCGACTGAGAATTTTGTCTAGTGAAGGCATGCATAGGTCCCAATAATCT AATTGGGACGCATTCTAGATCCTCCTGAAAAGATTTTAATTATATTCTTGAAAAAAATTAACTTATAGTTCTTGTGGATT CAACAAAAAATTTCTTAAATTGTTGCCATGGGAAATTTATGGCAATTTATGTTGTAGAGCGAGCCCAATTATGCGGCTTA GAGATGAATAGAGTAGTAGCCTAGGAAAACTTTCTTCATTTAGGTGATATCTCAAAATTTGAAGTGAGATATTAACAAGA GTTTCAAGGAATCGAAAAGATTCTGAGATTTTACCTTAATTTATTACATTTGATATTTATCTTCTTTTACTCAATGCTTA TCATTTACTATTATGTTGGTCAATCCTGTTTTGTATGCCAACTAAATCCTTGAGGGATATGAATTTACTTGAAAGTGCTC TTTTAGATGTATTTCTCCCTCTTCTTTAAATGTAATTTACTTACATTCAAAAGAAGATCTTGTCATGCGTTTGGTGAAAT CATATATGCTATAGATTTTCAATGAAGTTCACGCTGAGAGTAAATTCTGCATTGTTCTGTTACTTTATATGCGTGCAGAT ACATTTACTAAATCATAATCTTGTGATTGGTATGATCTCTATTCTACGTCCTTTAATCAATTGAGGATACTACATTGACT TCGTAGTTTAGTTGTACTTTTCTGTTTTTGGTCGAATAGTTTAATTGTACTTGAAATCCCGTTTACACGTGAGTTCCCGA GAATGAGTGCTTTTCTTTCTTGTTTATGATGATCTCTCTTCATATTTTTCTTTATTTTGTAAGGATTTCGAATAAGTAAT GCTTGAGGAGCCAAAGTCTTGAGTGAAGTCTATGAAACAGCTGCCTCTGGAGTTTAGTTATCAGAGATTGAGTTCAAAAA AGTCGGCAGCTATGAATGTAAGACTCTGGTACTCAGTCTCTACATTGGATTTAGCTACCAAATTTTACTTGTTGGACCAC CATGAAGTGAGTTTGGGTCTGAAAAAGATGTATGAACCAAAATGTTGATATCATATTATTTGGATCCAAAGCTCAATCTG CATTACACAAAATGCATGAAGAGGCAGTGGAAGGCCAAGATAATCTGGCCACAATGCCAAACCATAGTCTAAAGTACCCT TAAGATACCGCCAAAATCCTCTTGACTAGTTCTTCAAGAGGTTGTGACATGAATTGGCACACCTTACTAACACAAACCAT TTTTTGCATATTGATAGTTGCATATTTAAGGCACCCACAATTAACCTGTAGAGAGAATGACCACTTATATAATCAGAAAT CAGTACCATCTCTTGTTAGTTTATAGCCTCATGGAAGTAGAGTATAAATCCCTTTAGACCGATTAAGAGAAGTGAGCCAA CAGTAGCTGAATTCCAAGAAAACAGTCAAGCTCTCATGCTTGTTTAAGGGTAGAATTATTATTGAGTTTAGCTATCCGAT TCTGAATTAGAGATCGAGATGAAATTTCCCGTGATCATCAATGTAGACTAGAACATGGAGATAACAAGTAGCTCTTTTGA AGATCAGCAGTGGGGCACATCTACTGAAATTAGACTCAGTCTAGTTTGAGTGTTTTTAGCCTCTCATATCAAAGCTCAAA GGGCCTGTTTCAACCTTTAGATTGCCTTATTAAGTTTGCAAACCAACTATTTGTCACGAGGTTGTTGACTCATGTAAACC TCTTCTTCTAAGAAGTCATTCAAGAAAGTTACATCAACTTGCTGTAAAGTCCAGTCATTTGTAAGTGCAATTGTAGGGAT AATTGTCAGTGTCACATATGTAACAACTAGAGAAAGAGTCTCAAAACACAACCTACTCTTTGATGAAATCTATAGGAGAC TAACCTAGCCTTGAACCTATTCAAAATGCCAGTAGGGTAACACCCACTTCCATCCAGTGTGGAACCTGTCTGCTGCAAAG AAACTAAAGACCAATTGTGATTAGTAAGTAATCATCAAATTTAGCTTGCACATTTTCCTATCCTTATGGTAATGTCAAAG CTTGCTTTACTGAGGTTGGTTTTAAGGTAAAGAGTAAGAGAATATTCTGAAGATGAGGTTTGACAATTCTAGACTTTGAC ATGAAAGGAGTTGGTGTTGTTGGTGAAGAGGACAAACACTAGCCTACTTAGGATGAGGAAAAGGGAGATGGAGACGATTA TGCTATTGTATTACTAGACATAGGACTTGTCGCAGATTGTGGTGACATTTAGGGCTCGTGGCATCTGCAGGCCATAATGG AGAATAATGACAAAGGGGGGTGAAATTAAATTATGCTGACCTTTAGATTGTGATGAAGGGGTAATCTGAGGCTTGGAGAA ATAATGACTTTAGCATCTAAGTTCCTGAGGTATTTACAACCCTTACATGATAGAGGATACCCAAGGAATATGAACTCCGA TGATATGAAGTCAGTCAAGTTTATGATGATTATGAGGGCGCATGAAATGGTTAACGTGCACAAAGACTAGAATATTACAT GTCCCCGCAATCCCATGGGTCATCTTTTAGACCTAACAACTTAAATTTTTGAGATAATTAGTTCTTAACATGATATTAAA GTCTTTATAACCAAGTGACTTGGGGTTCGATCTTTACCACTCTCAGTTCTTCTAATAAAAAAAAAGTTGAATCCCAGCGC GTGGTAGATGAGTTTGTGCACTTTCACACTTTAAGTCTAAATGAGCTCTTTGTTAGAAATATAATCATTCATGTATCTTT TACGCAATGATTAAATTTTTTTGAATAAT
CDS sequence (LotjaGi1g1v0317200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTGACACCTCACCCTCCCCATCACTCAGACCGCTCAGCTTCTGCCGCCGCACGCATGCGCCGGAGTCGCCGGT GCTGAAGTGGAAGTCATTGGAGGAGGTAATGGCGAAGGCGCGCTACACGGTGGTGGAGCGCGAGGATTACGACGACCTCA TCTGTGATCAATGCGGCTCCGGCGACCGGCCGGACGAGCTGCTCCTCTGCGACAAATGTGACAAAGGCTTTCACATGAAA TGTGTGAGGCCGATCGTCGTCAGGGTTCCGATTGGATCATGGATTTGCCCTGATTGCTCCGGGATGACGAGTGTTAGGAG ATTGACGCAGAAGAGAATATTGGATTTCTTCAGGATTCGGAGGCGTGATTTTGCTAGAAAATGCACAGCTCCTTCTAGGG ATGCTAGGAGGCGTCGGAGAACTCGACCTCTGGTAGTCCAGAAGAAAAAGAGGAGACTGTTACCATTTATTCCTTCAGAA GATCCTGTCCAGAGACTGAAACAAATGGGTTCCCTTGCTTCTGCTTTAACAGCATTGCATATGGAATACAGTGATCACCT CACATACATGCCTGGAATGGCTCCTGGATCTGCTAATGACACCGATTTTGAACGTGGTGGCATGCAGACCCTCTCCATGG AAGACACAGAGACCTTAGAAAACTGCAAAGCTATGTCTACAAGAGGCGAATGCCCTCCCTTTATGGTTGTTTTTGATTCA CGTGAAGGCTATACCGTGGAGGCTGATAGCCCAATCAAGGATATGACATTTATTGCTGAGTACACTGGTGATGTGGATTA CATGAAGAATCGAGAATCGGATGATGGTGACAGTATGATGACACTTCTTCTTTCAAAAGAAGAGTCTCAAAGTCTTGTTA TATGTGCTGATAAACGCGGAAACCTCGCTCGCTTTATCAGTGGCATCAACAATCATACCCTGGAAGGAAGGAAGAAGCAG AACTGTAAATGTGTAAGATACAATGTAAATGGTCAATCCCGAGTCTTTTTGGTTGCTATTCGTGATATTGCCGAGGGGGA GAGGCTTTATTATGATTATAATGGTTATGAGCATGAATATCCGACTGAGAATTTTGTCTAG
Protein sequence (LotjaGi1g1v0317200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPDTSPSPSLRPLSFCRRTHAPESPVLKWKSLEEVMAKARYTVVEREDYDDLICDQCGSGDRPDELLLCDKCDKGFHMK CVRPIVVRVPIGSWICPDCSGMTSVRRLTQKRILDFFRIRRRDFARKCTAPSRDARRRRRTRPLVVQKKKRRLLPFIPSE DPVQRLKQMGSLASALTALHMEYSDHLTYMPGMAPGSANDTDFERGGMQTLSMEDTETLENCKAMSTRGECPPFMVVFDS REGYTVEADSPIKDMTFIAEYTGDVDYMKNRESDDGDSMMTLLLSKEESQSLVICADKRGNLARFISGINNHTLEGRKKQ NCKCVRYNVNGQSRVFLVAIRDIAEGERLYYDYNGYEHEYPTENFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 8 | 112 | 105 | 3.9E-18 | ||
| PANTHER | 28 | 366 | 339 | 1.9E-168 | – | |
| PANTHER | 28 | 366 | 339 | 1.9E-168 | – | |
| SUPERFAMILY | 42 | 107 | 66 | 9.3E-18 | ||
| ProSiteProfiles | 52 | 102 | 51 | 9.988 | ||
| Pfam | 54 | 100 | 47 | 4.6E-11 | ||
| SMART | 54 | 100 | 47 | 2.2E-10 | ||
| ProSitePatterns | 55 | 99 | 45 | - | ||
| CDD | 55 | 99 | 45 | 7.19729E-16 | – | |
| Gene3D | 151 | 366 | 216 | 3.0E-64 | – | |
| SUPERFAMILY | 225 | 354 | 130 | 1.57E-20 | – | |
| ProSiteProfiles | 232 | 354 | 123 | 14.094 | ||
| Pfam | 268 | 354 | 87 | 7.5E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0317200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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