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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0331400 |
| Transcript ID | LotjaGi1g1v0331400.8 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp|Q8VZG7|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr|I1KBV2|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78795314..78803287) extracted from Lotus japonicus Gifu genome v1.2.
CTAGGATGATGGATAATTGGATATGGCTGTGACGTGTTTAGTTGTCTTAAGGATTCTCATTTCTCAGGGGCATTTATCGT AATTACTTTACAAAACGAGGGTGCAATCTCAACCAGCATTCAACTGTTTATATAAAAACCCGTTTTCCTACAACCTCCAT TTTCTTCAACATCCACCACCGTGTTTCGCAACCTCCGCCGTAACTGTTACACTGAAAACTCCTGCTCCGCCGCGCTCGTG TTCCGGCGACGGATCCATTTCGTGTAACATAAGAACCCTAAAAAACTCGTTAGAATTGTTCTGTTTTTCACATTCGGATT CAGCTAAGCAGATCCGAACTGAGAACCATTTCAAGGTACCGTCGCTGAAACTCGATTGCATTCCTATTTGATTATCCGAT CCGTTTCATTCCGATAATTCCATGCAGTTTTGCAAAAATCTCAAGTTTTCATGGATCTGAGTTTTTATGCAGAGAATTCG AATTTCGTTTTTTGCATTCCGTTTTGCACCGGTTGCATGACGTTATTTCCTGAAATCGTGTTTGTTTTTTTGTATTTAAT GGCTTTGAATTGCATTGAAGTTTGCTGAATCGTGTTTGGTATTGGTTTGACTTTGTTGCAGATCGTACGGTGCGGTGGTA GCTGTTGAAGAATGGCATCGGCAGCGACTGGAGCTACAGGATGGTACAGGGGAAGGGTGAAGGCGGTTCCCTCAGGGGAT TGCTTGGTCATTGTGGCCGTTGCTAGCTCCAAGCCTGGTCCTCTGCCTGAGAAATCAATCACTCTGTCTTCTCTTATTGC TCCTCGGCTGGTAATTTCATTCAATTCACTGTTTTCGATTTGATTATGAGGTTGTGAGCTAGAATCTTGAATGAAGATTT TGAGACTCTGTCTGTTTTGATTTTAATTGCATTGGTGTTCTGTTGTTTGGATTTGTGGGAATTTCGCTAGGCGCGGAGAG GCGGTGTGGATGAACCATTTGCATGGGAAAGCAGAGAGTATCTGAGGAAGCTCTGCATAGGGAAGGTGGGAAGCTTATAC TTACTGCTACTCTAATAATTTGGTTGAGTGCTCTGGTTTTGTCTTCTTCTGACTGTGTGTTTGGCGTGATGTGTTGTTAT GTGAACAGGAGGTGACTTTTAGAGTTGATTACAGTGTGGCATCCATCAATCGAGACTTTGGAACTGTTTTTCTTGGTGAC AAGAATGTTGGGGTGTTGGTTGTTTCTCAAGGATGGGCAAAGGTTGAAATTTGATACCGTGTGATTTCCCATTTAGATGT TCCGCGTTTGATTACATTCTGCTTTGCTTAATTGAGATGTTAATTGTGAACTTGTTCATGCAGGTCAGAGAACAGGGGCA GCAGAAAGGAGAAGTGAGTCCATACCTGGCAGAATTGTTACGGCTTGAAGAGCAAGCTAAACAGGAAGGCCTTGGTCGTT GGAGCAAGGTTTGTTTGGGTTTTTTCCTCTTTAGTATAAAATGAATTTCAAAAAAGCTTGTAATTAAGGTGTGCTTTTTC AAACACACTGCTATTATTGTGATGCAGTACCTCAATATTGCAGTTCCATCATATGATGCGATCCCCAATTTGAATCTATA AATCCCTATTGTAATTATATAAAAATTGTCCTGATTACATGTGAAATTTAATAATTCACTTTTCTATTGCTGAAATGACC ATTTGAATTTACTTTCATATTTCAAATTAACATGCAATACAGAATGAACTCATGTTTGCTTATATTTTACAGATATCATC TTCTACTCTTATTTAAATTAATCGAAAATGGACACATGTAGTTGCAAATTCTTGTTTATTTTATGAGTGTAGCATTTATG ATTTTATGGTTATTGCAGGTTCCTGGTGCTGCTGAGGCATCCATCAGAAATCTACCACCTTCTGCCATTGGTGACGCCAG TAACTTCGATGCTATGGGTTTATTGGCTGCAAACAAGGGATCTCCGATGGAGGCAATTGTTGAGCAGGTTCGTGATGGCA GTACTCTCCGAGTCTACTTGCTCCCGGAGTTTCAGTTTGTCCAAGTTTTTGTCGCTGGAATTCAGGTATGTTTCATAATT TCTGTTACTATTACGACGGTTTATTTATACACGCCACTAATTGTTTTCCCTTCACACTAGTCCCCACAAATGGGAAGAAG AGCTGCACCTGAAACTGTAGTTGAAACAGAGTTACCAGCTGATGAAAATAATGGAGATGTTCCTGGGGAACCTCGACCAC CGCTTACATCTGCTCAAAGACTTGCGGTTTCATCATCTACTGAAACTGCAGCTGATCCTTTTGGACCTGATGCAAAATTT TACACTGAGATGCGTGTATTGAATCGAGATGTAAGTAACATGTTTCTCAGTTTCTGTAAGTTATATTCCTTGTGCACTTA TCAAAATTTTAATAATTCGAAACGGGTATGCAGGTTCGGATTGTTCTAGAAGGCGTGGATAAGTTTAGCAATTTGATCGG GTCGGTGTATTATCCGGATGGCGAATCAGCCAAAGACCTGGCACTGGAACTTGTGGAAAACGTATGTCACTCACCTCTGT AGAGTGATCTTGCCATGACTTTTTTTGTCTTAATCAATTCTTGATGAACCTGACTTTTTTGCTTCCATTGTTTTATACGG TAGAACTGCCTAACTGGTTTATTTGAGATTGAATTAAGTTTGTATTTGTGCTTAATTTCAGGGGATCCAGTGAGGGGGTA TTGTCATTACTTGGGAGTATATTATATATATGATTAGCATGATACACAATTTGTATTAAAATTTCAATTGAGTATTTAAT TAAGTAACCAAGTACCAGCTAAATAAATCTGAAAAGCGAAGCATTGCACTTGCTATCACTGCTGTGGCTTTATTTGCTCG AGTGGACTATATCATATGCAACTATTGGTGATTCTTTTTCGTTTGAGAAAAAGAGTAGACACAGTAATTATGAAGGTTTT GCATCCACTGTTATTCATTGTATTATTTTGTATCCTAGGTTTACGCAATATCTATATTCCATGGCATTTACTTATTTCCC TGGTCTATCTTCCATGGACATTTAGAATGTTTATCCATTCCATGTCTTTTAATGTGATGAAGTATCAGTCAAAATATTCT TAAAAATATCTCAATATTTTTTCCTGTTATATAGGGTTATGCTAAATATGTCGAATGGAGTGCAAATATGATGGAAGAAG AGGCAAAGCGGAGGCTGAAGACTGCAGAGCTCGAGGCTAAGAAAATCAGGTTAAGAATGTGGACAAACTATGTACCACCA GCTTCAAATTCAAAGGCAATTCATAACCAGAATTTTACTGGAAAGGTGAAATACTCTTCAATCATTTGTTCGTGACAAAA TGGTCAATCTTCAGTTATACAAGCATATCAACTTAACTTGATTTTTACAGGTGGTTGAGGTTGTTAGTGGAGATTGCATC ATTGTCGCTGATGATTCCATTCCGTATGGCAGCCCACTAGCTGAGAGGCGAGTTAACCTTTCAAGTATTAGGTGTCCGAA AGTAGGCAATCCTCGTCGAGATGAAAAACCAGCTCCCTATGCCCGTGAAGCAAAGGAGTTCCTAAGAACACGCCTCCTTG GTCGTCAAGTATGAAAATATCTTAAGTACCTTCTTTTAATATAATTACTGAGTTCATTATAATTTATTACTTCTGTTATG TTTCTCAGGTGAATGTAGAAATGGAATATTCTAGAAAGATTGTTCCTACAGATGGATCTGCAGTTCCTTCACCAGCTGCT GATTCCAGAGTAATGGATTTTGGATCAGTCTTCTTATTGTCTGCTACGAAAGCTGACAGTGATGATACCCCTTCATCTAT TCCTTCAGCTGGAAGTCAGCCAACTGGTGTCAATGTTGGTGAATTGGTTGTTGGCCGTGGCTTTGGAACTGTCATTAGAC ATCGTGACTTTGAAGAGAGATCTAACTACTATGATGCCCTTCTTACTGCTGAATCGCGTGCCCTTTCTGGAAGGAAAGGG ATCCATTCTGCCAAGGATCCTCCAGTGATGCATATAACTGACTTGACCACCGTGAGAAAATTTATAATTATGCTTTAATT TCTTTTTACTCAGAAGTTCGTAAAATTTAACTCGATAATATATTCCCGGTTGATTCATATCAGACATCAGCCAAGAAAGC CAAAGACTTCTTGCCTTTCCTACAACGAAGTAGAAGGGTTCCTGCTGTTGTGGAATATGTCCTCAGTGGCCATCGTTTCA AGTTGTTAATTCCAAAAGAAACTTGCAGCATTGCTTTCGCACTCTCTGGTGTCAGGTGTCCTGGTCGTGGTGAGCCTTAT TCTGAAGAAGCAATAGCACTGATGAGGCGAAAGATAATGCAGAGAGATGTAGAGGTAATTCAGTTGCTTAATGAACTTAA GGTTCCTGAATATTCCTTTTTTTATTAAATGTTTTAATTCTTGCAGTTTGAGGTGGAAACTGTTGATAGAAATGGAACAT TCTTGGGATCCTTATGGGAGTCAAGAACAAATGTTGCACTCACACTACTTGAAGCCGGTCTTGCAAAACTTCAGACTTCC TTTGGCAGCGATAGAATTCCTGAATTTCACCTTTTGGATCGAGCTGAACAATCTGCTAAGAAGCAAAAACTGAAAGTAAA ATAGGGTCCCAATAATGTTTGAAATTACCGCTTTTATTTCCCTGTTAACTTTTCTAAAGTTAAAATGTTTTGCAGATCTG GGAGAACTTCGTTGAAGGAGAGGAAGTATCCAATGGGGCAAATGTTGAAAGCAAACAACAAGAAGTACTTAAGGTGCTTA GGATAATATATTGCTAATGATACATCTTTTTTGTTTAAAACTGTGGATTCAGGAATTACTTATTCCATTGTCATGCTTCC ACAGGTAATTGTTACCGAAGTCTTGGGTGGTGATAAATTTTATGTCCAGACCGTTGGTGATCAAAAGATAGCATCCATCC AGCAACAGCTTGCTTCTTTGAACCTGAAGGAAGCTCCTGTGCTTGGTGCATTTAGTCCTAAGAAGGGTGACACAGTCCTT TGTTATTTTCATGGCGATAAGTCCTGGTACCGGGCAATGGTGAGTTCAAACCTGAACCTGAAATATTTCTTTTGTTTTGT CCTTTCCCCCTGACTGGTGTCGGCATTGCATTCCATGGCTAAAACCATGTGCCCATTGACTAAGGGATGATGAAAAATAT ATGAATTGATGATTAAGTCACAGTGACCTGTTTCTTTAATATCTTTCCTCTTTTTTTCTGGACTTTTTCGCCCCCCCCCC CCAACCGATGGCTTTGTAATTGATGTTTTATCCTTTAATATATTTTGAAGTTTACATCAGTCTGTTTATAAACCCTTTTG CATATATGAAGCAAGCTGCTTGAGTTTTAAGCTCATAATTTTAATGTGTAGTTTCAATCTCTTTAAACCAGGTATTTTGG TATAAATATGATTTCTTTTCTTGCCAGAAAATGATTGACCTTAGATGATTTAATATTTCATTATATGCGCCAACACCATA TGCATCCCTTCTTTATGACTCGTTGCAATTTCGTGTATTGTAATTTTAGGGTTAGAGTTCATGAGATGCGCTAAGTAGGC AGTGCATCACTTGTAAATTACCTTGTCTGTTTCCACTCTTATTTCTTTAATTCCTTATGAAACTATTTGTGCTGCAACAA TCCTTTGTTTTTTTTGCGCTGATCATCCATACATGAGTTTCGTAGGTTGTGAATACACCTCGAGGACCAGTTGAATCTCC TCAGGACATATTTGAAGTATTCTACATTGACTATGGAAATCAAGAACAAGTAGCTTACAGTCAGTTACGACCTCTTGATC AGTCCGTGTCTGCCGCACCCGGTCTTGCTCAATTGTGCAGTCTTGCATACATTAAAAGTCCAAGCTTGGAAGAGGATTTC GGCCAAGAAGCAGCTGAATATTTGAGTGAACTCACTTTAAGCAGTGGAAAAGAGTTCAGAGCCCAGGTTGAGGAGAGAGA TACTTCTGGAGGAAAAGCAAAAGGGCAGGGAACTGGGACAATTCTTGCTGTAACTCTTGTTGCTGTGGATGCTGAGATCA GCGTTAACGCAGCCATGCTACAGGTGCTTATAGCTGCTCACTTTTACTTGATATAATTTCATTGTGTTTGGATTTCCGTT AAACTCAACGTGGATTCACGTCGAGTTCAACGTGGCAAATTCTAGCTTCTTCGTTGATACCTTTAGATACGTGAAATCCT GTTTGTGTTTGCACCAACGCCAGACCAAAGATACACTCAAAGTCTTATAGTTTGATTCTCTATACAAACACTTCTCTGAA CATTCTGTTTTCTTGTGGAATTTTCAGGAAGGACTAGCCAGGATGGAAAAAAGGAATCGGTGGGACAGAAAAGAAAGAAA GGCGGGTCTTGATAGTCTGGAAAAATTCCAGGACGAGGCACGCACCAAACGGCGTGGGATGTGGCAGTATGGAGATGTTG AGTCAGATGAGGAGGACGGTCCTCCGGCGAGAAAAGCTGGTACTGGCCGCAAATGAGTGTAACAGACAGGAGGTAAATCA TATGTTATAGACATCATGAGAGAATGGTTCAATTTATAGGCATGAGTTAGAGAGAAAAAGAAGGAAATGCCGTGCTTATT CCTTTGTAAGTTTTGTTTTATTAATCTTTGTTTTAACATTTTTGTGTTAGGTTGATGGGACAATTGTTTTCTATAGATGT CATAATAAGGTGCATGCGGCAGGGTTCTTTGTTACTATGAGAACAGAAGAGGCGTTTTGGTCTTTTTTAAGAACTTCTCT TACATTTTCCCCTATGGTTTGGTTTGGTTTTGGATTGAAGACTTTTCTTAATAAGTTAACCTGGGTTAGATCCAGTCCCT ACAGACAATAAGATTTTTCATTATGAAATCACAAGTACATGTATTCTTTAACTCAAGCCCATTCAAACTTTTCAGCCAGT ACTCTTTCTAAAAAGCTTTTGCAGAAATACAACTCTCCTTTATAACTTAGCTTGGGAGGAATACAACTGAAGATGGAATA GTATACTATAATGTTAAACAACTCACAACACTCAAAGAATGTATAACCGTTTAGTTTATAACTAAAAGTCACTCCAAATG ATGTGGAACTATTGCAAAAACAAATTGGAGGGTAGTTTGAGTAGGAAATAATGGAGATCATTTTGTTGAATAATTGTGTT CTTGTCTTAGGACAAGAGAACCCTAAGAGAAAACCCTAGTAGAGGGAGGTAAGAGAAATTAAAGTCTTGTGTCATAATGA AAGGGTTCCTTTTACAATGGATGACCTCTCCTTTTATAGTGATATGATCCAAAACCCTAATGCTAGCCTATTTGGGCTCT TGGGCCTCATAAATCCTCGGCTTAAGATTACTTACTAGAGAACACTCTTAGTTTGATACCTATGGGAATCACCTATTCTC TTTACAAGGGTCAGGTCACCCTAATCTAACTAAAGATGTGACCGGTTGCCCTAAGGAGGCCTCGCCTAGTCTTTCTGTAG TCACGCCGAGCTTTGACTGTGGGCCGGTCCTATCACGACAGGTCCTGCCCAGCCCAAATTGCTTTGCACCACTTCAACTT ACTGCTCACATATCATTTTGTAGTTGAATTTTGAGGAAACTAGCCGTTGAACATGAACTTTAGAGGACTTTGGTTTTAAC AGCCTCCACATCCAACATTTGTTTAAGGAATTAAGGCTTCATCAGTAGACTTCTATCCTTGAGGTTTACACATTGTATAT ATTCCAATATGATTGTCAACATCCTAAGCTATAAATACATATACGGGTGAACAAATATTTACTATATGTGGCAAGTTCTT CACAGCTCACTCTTGTCACACTTCTAGACTAGACGGGGAACAATCAAATAGCTTTCATAAATTTAAATACATATACGGGT GAACAAATATTTACTATCTTTACTCAAATGTGAAGTACCATAGCAACTAGTTAG
CDS sequence (LotjaGi1g1v0331400.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCGGCAGCGACTGGAGCTACAGGATGGTACAGGGGAAGGGTGAAGGCGGTTCCCTCAGGGGATTGCTTGGTCAT TGTGGCCGTTGCTAGCTCCAAGCCTGGTCCTCTGCCTGAGAAATCAATCACTCTGTCTTCTCTTATTGCTCCTCGGCTGG CGCGGAGAGGCGGTGTGGATGAACCATTTGCATGGGAAAGCAGAGAGTATCTGAGGAAGCTCTGCATAGGGAAGGAGGTG ACTTTTAGAGTTGATTACAGTGTGGCATCCATCAATCGAGACTTTGGAACTGTTTTTCTTGGTGACAAGAATGTTGGGGT GTTGGTTGTTTCTCAAGGATGGGCAAAGGTCAGAGAACAGGGGCAGCAGAAAGGAGAAGTGAGTCCATACCTGGCAGAAT TGTTACGGCTTGAAGAGCAAGCTAAACAGGAAGGCCTTGGTCGTTGGAGCAAGGTTCCTGGTGCTGCTGAGGCATCCATC AGAAATCTACCACCTTCTGCCATTGGTGACGCCAGTAACTTCGATGCTATGGGTTTATTGGCTGCAAACAAGGGATCTCC GATGGAGGCAATTGTTGAGCAGGTTCGTGATGGCAGTACTCTCCGAGTCTACTTGCTCCCGGAGTTTCAGTTTGTCCAAG TTTTTGTCGCTGGAATTCAGTCCCCACAAATGGGAAGAAGAGCTGCACCTGAAACTGTAGTTGAAACAGAGTTACCAGCT GATGAAAATAATGGAGATGTTCCTGGGGAACCTCGACCACCGCTTACATCTGCTCAAAGACTTGCGGTTTCATCATCTAC TGAAACTGCAGCTGATCCTTTTGGACCTGATGCAAAATTTTACACTGAGATGCGTGTATTGAATCGAGATGTTCGGATTG TTCTAGAAGGCGTGGATAAGTTTAGCAATTTGATCGGGTCGGTGTATTATCCGGATGGCGAATCAGCCAAAGACCTGGCA CTGGAACTTGTGGAAAACGGTTATGCTAAATATGTCGAATGGAGTGCAAATATGATGGAAGAAGAGGCAAAGCGGAGGCT GAAGACTGCAGAGCTCGAGGCTAAGAAAATCAGGTTAAGAATGTGGACAAACTATGTACCACCAGCTTCAAATTCAAAGG CAATTCATAACCAGAATTTTACTGGAAAGGTGGTTGAGGTTGTTAGTGGAGATTGCATCATTGTCGCTGATGATTCCATT CCGTATGGCAGCCCACTAGCTGAGAGGCGAGTTAACCTTTCAAGTATTAGGTGTCCGAAAGTAGGCAATCCTCGTCGAGA TGAAAAACCAGCTCCCTATGCCCGTGAAGCAAAGGAGTTCCTAAGAACACGCCTCCTTGGTCGTCAAGTGAATGTAGAAA TGGAATATTCTAGAAAGATTGTTCCTACAGATGGATCTGCAGTTCCTTCACCAGCTGCTGATTCCAGAGTAATGGATTTT GGATCAGTCTTCTTATTGTCTGCTACGAAAGCTGACAGTGATGATACCCCTTCATCTATTCCTTCAGCTGGAAGTCAGCC AACTGGTGTCAATGTTGGTGAATTGGTTGTTGGCCGTGGCTTTGGAACTGTCATTAGACATCGTGACTTTGAAGAGAGAT CTAACTACTATGATGCCCTTCTTACTGCTGAATCGCGTGCCCTTTCTGGAAGGAAAGGGATCCATTCTGCCAAGGATCCT CCAGTGATGCATATAACTGACTTGACCACCACATCAGCCAAGAAAGCCAAAGACTTCTTGCCTTTCCTACAACGAAGTAG AAGGGTTCCTGCTGTTGTGGAATATGTCCTCAGTGGCCATCGTTTCAAGTTGTTAATTCCAAAAGAAACTTGCAGCATTG CTTTCGCACTCTCTGGTGTCAGGTGTCCTGGTCGTGGTGAGCCTTATTCTGAAGAAGCAATAGCACTGATGAGGCGAAAG ATAATGCAGAGAGATGTAGAGTTTGAGGTGGAAACTGTTGATAGAAATGGAACATTCTTGGGATCCTTATGGGAGTCAAG AACAAATGTTGCACTCACACTACTTGAAGCCGGTCTTGCAAAACTTCAGACTTCCTTTGGCAGCGATAGAATTCCTGAAT TTCACCTTTTGGATCGAGCTGAACAATCTGCTAAGAAGCAAAAACTGAAAATCTGGGAGAACTTCGTTGAAGGAGAGGAA GTATCCAATGGGGCAAATGTTGAAAGCAAACAACAAGAAGTACTTAAGGTAATTGTTACCGAAGTCTTGGGTGGTGATAA ATTTTATGTCCAGACCGTTGGTGATCAAAAGATAGCATCCATCCAGCAACAGCTTGCTTCTTTGAACCTGAAGGAAGCTC CTGTGCTTGGTGCATTTAGTCCTAAGAAGGGTGACACAGTCCTTTGTTATTTTCATGGCGATAAGTCCTGGTACCGGGCA ATGGTTGTGAATACACCTCGAGGACCAGTTGAATCTCCTCAGGACATATTTGAAGTATTCTACATTGACTATGGAAATCA AGAACAAGTAGCTTACAGTCAGTTACGACCTCTTGATCAGTCCGTGTCTGCCGCACCCGGTCTTGCTCAATTGTGCAGTC TTGCATACATTAAAAGTCCAAGCTTGGAAGAGGATTTCGGCCAAGAAGCAGCTGAATATTTGAGTGAACTCACTTTAAGC AGTGGAAAAGAGTTCAGAGCCCAGGTTGAGGAGAGAGATACTTCTGGAGGAAAAGCAAAAGGGCAGGGAACTGGGACAAT TCTTGCTGTAACTCTTGTTGCTGTGGATGCTGAGATCAGCGTTAACGCAGCCATGCTACAGGAAGGACTAGCCAGGATGG AAAAAAGGAATCGGTGGGACAGAAAAGAAAGAAAGGCGGGTCTTGATAGTCTGGAAAAATTCCAGGACGAGGCACGCACC AAACGGCGTGGGATGTGGCAGTATGGAGATGTTGAGTCAGATGAGGAGGACGGTCCTCCGGCGAGAAAAGCTGGTACTGG CCGCAAATGA
Protein sequence (LotjaGi1g1v0331400.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASAATGATGWYRGRVKAVPSGDCLVIVAVASSKPGPLPEKSITLSSLIAPRLARRGGVDEPFAWESREYLRKLCIGKEV TFRVDYSVASINRDFGTVFLGDKNVGVLVVSQGWAKVREQGQQKGEVSPYLAELLRLEEQAKQEGLGRWSKVPGAAEASI RNLPPSAIGDASNFDAMGLLAANKGSPMEAIVEQVRDGSTLRVYLLPEFQFVQVFVAGIQSPQMGRRAAPETVVETELPA DENNGDVPGEPRPPLTSAQRLAVSSSTETAADPFGPDAKFYTEMRVLNRDVRIVLEGVDKFSNLIGSVYYPDGESAKDLA LELVENGYAKYVEWSANMMEEEAKRRLKTAELEAKKIRLRMWTNYVPPASNSKAIHNQNFTGKVVEVVSGDCIIVADDSI PYGSPLAERRVNLSSIRCPKVGNPRRDEKPAPYAREAKEFLRTRLLGRQVNVEMEYSRKIVPTDGSAVPSPAADSRVMDF GSVFLLSATKADSDDTPSSIPSAGSQPTGVNVGELVVGRGFGTVIRHRDFEERSNYYDALLTAESRALSGRKGIHSAKDP PVMHITDLTTTSAKKAKDFLPFLQRSRRVPAVVEYVLSGHRFKLLIPKETCSIAFALSGVRCPGRGEPYSEEAIALMRRK IMQRDVEFEVETVDRNGTFLGSLWESRTNVALTLLEAGLAKLQTSFGSDRIPEFHLLDRAEQSAKKQKLKIWENFVEGEE VSNGANVESKQQEVLKVIVTEVLGGDKFYVQTVGDQKIASIQQQLASLNLKEAPVLGAFSPKKGDTVLCYFHGDKSWYRA MVVNTPRGPVESPQDIFEVFYIDYGNQEQVAYSQLRPLDQSVSAAPGLAQLCSLAYIKSPSLEEDFGQEAAEYLSELTLS SGKEFRAQVEERDTSGGKAKGQGTGTILAVTLVAVDAEISVNAAMLQEGLARMEKRNRWDRKERKAGLDSLEKFQDEART KRRGMWQYGDVESDEEDGPPARKAGTGRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 979 | 979 | 0.0 | ||
| PANTHER | 6 | 986 | 981 | 0.0 | – | |
| PANTHER | 6 | 986 | 981 | 0.0 | – | |
| SUPERFAMILY | 9 | 151 | 143 | 1.03E-29 | – | |
| ProSiteProfiles | 10 | 151 | 142 | 26.673 | ||
| Gene3D | 10 | 155 | 146 | 6.8E-39 | ||
| SMART | 10 | 151 | 142 | 1.7E-27 | ||
| Pfam | 43 | 151 | 109 | 6.2E-10 | ||
| SUPERFAMILY | 183 | 368 | 186 | 7.19E-25 | – | |
| ProSiteProfiles | 186 | 364 | 179 | 29.445 | ||
| SMART | 186 | 364 | 179 | 7.2E-28 | ||
| MobiDBLite | 237 | 257 | 21 | - | – | |
| Pfam | 267 | 363 | 97 | 1.3E-12 | ||
| Coils | 340 | 360 | 21 | - | – | |
| SUPERFAMILY | 375 | 561 | 187 | 1.31E-22 | – | |
| Gene3D | 376 | 565 | 190 | 2.1E-46 | ||
| ProSiteProfiles | 378 | 557 | 180 | 24.149 | ||
| SMART | 378 | 557 | 180 | 8.2E-14 | ||
| Gene3D | 567 | 712 | 146 | 8.8E-49 | ||
| SUPERFAMILY | 581 | 714 | 134 | 1.57E-27 | – | |
| ProSiteProfiles | 587 | 714 | 128 | 25.793 | ||
| SMART | 587 | 714 | 128 | 2.0E-29 | ||
| Pfam | 616 | 714 | 99 | 3.5E-14 | ||
| Pfam | 732 | 855 | 124 | 1.2E-20 | ||
| ProSiteProfiles | 733 | 968 | 236 | 18.28 | ||
| Gene3D | 737 | 969 | 233 | 8.2E-67 | ||
| Gene3D | 753 | 849 | 97 | 8.2E-67 | – | |
| SUPERFAMILY | 757 | 852 | 96 | 2.71E-15 | – | |
| SMART | 779 | 843 | 65 | 7.4E-8 | ||
| ProSiteProfiles | 780 | 845 | 66 | 16.023 | ||
| CDD | 784 | 837 | 54 | 1.03962E-10 | – | |
| SUPERFAMILY | 794 | 974 | 181 | 1.83E-18 | – | |
| Pfam | 862 | 967 | 106 | 1.4E-8 | ||
| MobiDBLite | 936 | 989 | 54 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | RISC complex | A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation. | ||
| Biological process | Gene silencing by RNA | Any process in which RNA molecules inactivate expression of target genes. |
Expression pattern of LotjaGi1g1v0331400.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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