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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0396800 |
| Transcript ID | LotjaGi1g1v0396800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT5G35390.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGU0|PRK1_ARATH Pollen receptor-like kinase 1; TrEMBL-Plants: tr|A0A0S3RCN5|A0A0S3RCN5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0396800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88282160..88285908) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAACAGCTTCTAACCAAAGCCACAAGCAAGATATATGGCCGGCCTAACCAGCTCATTCATTGCAGGAAAAACCTTG TCATTGTCACCCACAACACCATCAAACCATGACTCTTATATCGTTTTCTCAACATTCCTCCCATCCTTCATCCTCATTTT CTCAATTTCAGTTTCAGTTCCCATCTCTCAATTCCAATCATGTCTCATAAAACAGAACACTTCTTGTTTCTTATCATACT CTTCATGATAGCCACTTGTTTTGCACCATCCCATGCTGACACAGATGCACAAGTTCTGTTGAACTTCAAAAGCTTCTTGT CCAATGCAGATGATGCTTTAAACAACTGGGTGGAAAATTCTATCAGCGTGTGCAGTTGGAGTGGTATAATATGTGTCAAT CAAAAACTTCATGGTTTGAAGCTAGAGAACATGGGATTAGGTGGCACAATTAGAGTAGACATTCTTAAACAGTTGTCCAC CTTGAATACTTTTAGTGTCATGAACAATAGATTTGAGGGTCCATTTCCTGAATTCAAAGAGATTTTGACTTTAAGGGGAT TGTTTCTTAGCAATAACAAGTTCTCTGGTGAAATTCCTGACGATGCTTTTCAAGGCATGAGAGGGTTGAAGAGAGTGTTC TTGGCAGAAAATAAGTTCACAGGTGAAATTCCTAAGTCCCTTGCTCAATTGCCTAGGCTTTTGGATGCGGACTTGCATGG AAATGGTTTTCAAGGTAACATACCGGAGTTTCAGCAGAGAGATTTCAGAGTGTTTGATTTATCTAACAACCAATTGGAGG GTCCTATTCCAGAAAGCTTAAGCAACGTGGGTCCAAATGCATTTGCAGGTATTATTTTGTTTTTATTTGTTCTTGCTCAT TATATCAAATTCAAAACAAATATCCAATTTCATCGTTAGACTTTTTTTTTTTGAACTGATTCTCACTACTTCACAAAAAA CAAACTTTTTCCCATCTCTTGTTCTCGCTATATACATCATACATAGAAATCTTCTTGTATATTTGAAACTTTTGATGTCA TTGTTGTTTGTTCATCCCTCATTTTAGTAGTGATTTTAACTGTTCAAGTTATTGGAAAATCCAATGACATATTTTGGTAA CATTGTAAACGTTAGAGTCTTAATAAAAAAAAAAATTAAACTACAACAATGGTTTATCAAAAGTCCAACTTATTCTAGTT ATGAATCTCATAATTTATTATGTCCACTGCAGAAACAACTCTCTCTAGCTTCTTCACATAATTGATTTTGGGGCTAAAAT AAATTTTAAGTCAATTGTCAAACATTTACAGAACCAACTAAAAGTAATTCTAATCAGGTGACTTAATACTAAGGCTCCTA AATATGGTATCAAACACACAATCAATTCATTATCCTTGTAAGCTAATTTTTCTAGTGCAAATTAACAGGAAATCAAGGTC TATGTGGAAAACCTGTAAGCAACCCCTGCAGCAGTAGCAGCACCCCACCATCCTCTGGTCAAAACCCACCGTCAGATCAA AAACATGAAAACAAGAAGCACCACCATCTTCTTATCACTATCATTGTTGTGGTGATTGTGTTTGTCCTGGCTTTAATTCT AGCCCTCTTGTTCCTTCGTTACCGTCGGAGCCAAACTGCAGATGAAAAACCAGTGTTGATCCACCATGCACAACCCTTGC AACAGTCCCAGAACACCAGTACAGTTTCCATTGAGATCAAAGACACAGCAGGTGAAGCATCCATGAAGATTGAAGATGGA GACTTGAACTTCGTTACCAACGATAGGGAGGCGTTTGATTTGCAAGACTTGCTCAGGGCCTCTGCTGAGGTTCTGGGCAG TGGCAGTTTTGGATCCACCTACAAGGCCATGGTTGTGAGTGGACCTGTTGTGGTGGTGAAGAGGTTTAAGCACATGAATG TTGTTAAGAAGAAAGAGTTCTCTGAGCACATGAAAAGGCTTGGAAGGTTGTCACATCCCAATCTGCTACCTCTTGTTGCA TTCTACTATGGAAAAGAAGAGAAGCTTCTGGTTCAAGACTTTGTTGAAAATGGCAGCTTGGCTAGTCATCTTCATGGTAT GTATATAAATAATATGATCACATTAATTTATCTTAGAACCAAATATAACATTTTCACATTTATACATGGTTTGAAAAAAA TTATTATTGGAATACAATATAAGAACATTCATATATTTCCATTGAACAATTTAAACTTTCGTGGAAATTGTTTCATGACA TAGTATCAAAACCTGTCTTCTCATAAAAGTTGAACGTTTTAAAAGTTTTTGAGACAGTTGCTCTATGACATATTCATATA TAGACTATGAGTGTGTTTGGATCAACGTTGTCTATAATTAATTTGGAAATAACTAACTTTTGTAAAATTAATTATGATTA ACGTGAGTTGAAAAGTGGTATGATTTATGTTTCAATATGTTTAAGAGAAAAGTGATTTCTGTAAGATAATATTGTGAAAT CGAGTTGAAAAATCTCACAATTGATTATATTATGCATAAACTACTCTTTGTAACTTAAGGCATAATTGATTTTGAGTCTG AATCAATTCTCCAAAATTGTTGACTCTCAAACATCCAAAATTGATCTTACTTTAATTGATTCTGAAGCTGTGCAAACACA CACTTAATTTGCTTAGATGTATTAACTAATGGACTAATGGTACACATATGCACATTGATGACAATATATTGATATGATAT TGCAGGCAGGGGAGGTAGTGAATTGAACTGGCCAACTCGTTTGAAGATCATTAAAGGAGTAGCAAGGGGTTTAGCTTATC TTTACAGAGAGTTTCCTGATCAAAAGACACCACATGGTCATCTAAAATCGTCCAATGTTTTGCTAGACCATAAATTTGAG CCTCGTTTGACAGAGTATGGACTTGGGGCAGTGGTGGAGAAGAAGCATGCTCAGCAGTTCATGGCAGCAAACAAGTCCCC AGAGAAGGAGGGGCCAGGTGAGAAGAGTGACGTGTGGTGCTTAGGGATCCTGATACTGGAGGTTCTGACAGGGAAGTTCC CAGCAAACTATGTGAGGCATGGGAAGGAAGGGAGTGAGGAATTGGCATTGTGGGTGGAGTCAATGGTGAGGGAAGGGTGG AATGCAGGGGAGGTGTTGGATAAGAGCATAATTTCAAATGGGGATGGTGGTGAGATGGTGAAGCTGTTGAGGATTGGGAT GAGTTGTTGTGAGTGGAGTGTGGAGAGTAGGTGGGATTGGAAGGAGGCAGTGGCCAAGATTGAGGAGTTGAAGGAGAAGG ATTATCAAGAAGATGGAAGTGAATTTGAAAGTGAAAGGGATCAATATTTGTCCTCATCCATTGATTCAGGGATATGATGA TGATGATGATGATGATGATGATGATGATGATGCATCTTTGTATGAGAGATGAAGAAAGCAAGGCAATGAGTGAACAACAG CACATCACATAGGAAATTCAGTCACATGATGAATACATATCTGTATTCACTATTCAGTGTTATTCTAATATAAAAAGGAT TAAAAAACAATATTATCATCACATGTAAAAAAAGACATTTTTTTACTATATGTTATTTTTTTCATTGAAAGATGTAATAA GAGGAGAAAACCATAAGATATAATCTATTGTAATATATAAAGGTCGAATTGTAATATGTAGTTTATGTCTTTTGCTTCAC ACGCGCCATCGTATGAGGGCTTGTAGATAATTCATCTTCCACCGTTATAAATATAATTTAATTTCCAAA
CDS sequence (LotjaGi1g1v0396800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCATAAAACAGAACACTTCTTGTTTCTTATCATACTCTTCATGATAGCCACTTGTTTTGCACCATCCCATGCTGA CACAGATGCACAAGTTCTGTTGAACTTCAAAAGCTTCTTGTCCAATGCAGATGATGCTTTAAACAACTGGGTGGAAAATT CTATCAGCGTGTGCAGTTGGAGTGGTATAATATGTGTCAATCAAAAACTTCATGGTTTGAAGCTAGAGAACATGGGATTA GGTGGCACAATTAGAGTAGACATTCTTAAACAGTTGTCCACCTTGAATACTTTTAGTGTCATGAACAATAGATTTGAGGG TCCATTTCCTGAATTCAAAGAGATTTTGACTTTAAGGGGATTGTTTCTTAGCAATAACAAGTTCTCTGGTGAAATTCCTG ACGATGCTTTTCAAGGCATGAGAGGGTTGAAGAGAGTGTTCTTGGCAGAAAATAAGTTCACAGGTGAAATTCCTAAGTCC CTTGCTCAATTGCCTAGGCTTTTGGATGCGGACTTGCATGGAAATGGTTTTCAAGGTAACATACCGGAGTTTCAGCAGAG AGATTTCAGAGTGTTTGATTTATCTAACAACCAATTGGAGGGTCCTATTCCAGAAAGCTTAAGCAACGTGGGTCCAAATG CATTTGCAGGAAATCAAGGTCTATGTGGAAAACCTGTAAGCAACCCCTGCAGCAGTAGCAGCACCCCACCATCCTCTGGT CAAAACCCACCGTCAGATCAAAAACATGAAAACAAGAAGCACCACCATCTTCTTATCACTATCATTGTTGTGGTGATTGT GTTTGTCCTGGCTTTAATTCTAGCCCTCTTGTTCCTTCGTTACCGTCGGAGCCAAACTGCAGATGAAAAACCAGTGTTGA TCCACCATGCACAACCCTTGCAACAGTCCCAGAACACCAGTACAGTTTCCATTGAGATCAAAGACACAGCAGGTGAAGCA TCCATGAAGATTGAAGATGGAGACTTGAACTTCGTTACCAACGATAGGGAGGCGTTTGATTTGCAAGACTTGCTCAGGGC CTCTGCTGAGGTTCTGGGCAGTGGCAGTTTTGGATCCACCTACAAGGCCATGGTTGTGAGTGGACCTGTTGTGGTGGTGA AGAGGTTTAAGCACATGAATGTTGTTAAGAAGAAAGAGTTCTCTGAGCACATGAAAAGGCTTGGAAGGTTGTCACATCCC AATCTGCTACCTCTTGTTGCATTCTACTATGGAAAAGAAGAGAAGCTTCTGGTTCAAGACTTTGTTGAAAATGGCAGCTT GGCTAGTCATCTTCATGGCAGGGGAGGTAGTGAATTGAACTGGCCAACTCGTTTGAAGATCATTAAAGGAGTAGCAAGGG GTTTAGCTTATCTTTACAGAGAGTTTCCTGATCAAAAGACACCACATGGTCATCTAAAATCGTCCAATGTTTTGCTAGAC CATAAATTTGAGCCTCGTTTGACAGAGTATGGACTTGGGGCAGTGGTGGAGAAGAAGCATGCTCAGCAGTTCATGGCAGC AAACAAGTCCCCAGAGAAGGAGGGGCCAGGTGAGAAGAGTGACGTGTGGTGCTTAGGGATCCTGATACTGGAGGTTCTGA CAGGGAAGTTCCCAGCAAACTATGTGAGGCATGGGAAGGAAGGGAGTGAGGAATTGGCATTGTGGGTGGAGTCAATGGTG AGGGAAGGGTGGAATGCAGGGGAGGTGTTGGATAAGAGCATAATTTCAAATGGGGATGGTGGTGAGATGGTGAAGCTGTT GAGGATTGGGATGAGTTGTTGTGAGTGGAGTGTGGAGAGTAGGTGGGATTGGAAGGAGGCAGTGGCCAAGATTGAGGAGT TGAAGGAGAAGGATTATCAAGAAGATGGAAGTGAATTTGAAAGTGAAAGGGATCAATATTTGTCCTCATCCATTGATTCA GGGATATGA
Protein sequence (LotjaGi1g1v0396800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSHKTEHFLFLIILFMIATCFAPSHADTDAQVLLNFKSFLSNADDALNNWVENSISVCSWSGIICVNQKLHGLKLENMGL GGTIRVDILKQLSTLNTFSVMNNRFEGPFPEFKEILTLRGLFLSNNKFSGEIPDDAFQGMRGLKRVFLAENKFTGEIPKS LAQLPRLLDADLHGNGFQGNIPEFQQRDFRVFDLSNNQLEGPIPESLSNVGPNAFAGNQGLCGKPVSNPCSSSSTPPSSG QNPPSDQKHENKKHHHLLITIIVVVIVFVLALILALLFLRYRRSQTADEKPVLIHHAQPLQQSQNTSTVSIEIKDTAGEA SMKIEDGDLNFVTNDREAFDLQDLLRASAEVLGSGSFGSTYKAMVVSGPVVVVKRFKHMNVVKKKEFSEHMKRLGRLSHP NLLPLVAFYYGKEEKLLVQDFVENGSLASHLHGRGGSELNWPTRLKIIKGVARGLAYLYREFPDQKTPHGHLKSSNVLLD HKFEPRLTEYGLGAVVEKKHAQQFMAANKSPEKEGPGEKSDVWCLGILILEVLTGKFPANYVRHGKEGSEELALWVESMV REGWNAGEVLDKSIISNGDGGEMVKLLRIGMSCCEWSVESRWDWKEAVAKIEELKEKDYQEDGSEFESERDQYLSSSIDS GI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 8 | 21 | 14 | - | – | |
| PANTHER | 11 | 623 | 613 | 4.8E-291 | – | |
| PANTHER | 11 | 623 | 613 | 4.8E-291 | – | |
| Gene3D | 22 | 187 | 166 | 5.0E-35 | ||
| Phobius | 22 | 26 | 5 | - | – | |
| Pfam | 26 | 65 | 40 | 3.5E-10 | ||
| Phobius | 27 | 256 | 230 | - | – | |
| SUPERFAMILY | 28 | 210 | 183 | 2.23E-30 | – | |
| Pfam | 118 | 176 | 59 | 4.5E-7 | ||
| Gene3D | 188 | 237 | 50 | 7.5E-6 | ||
| MobiDBLite | 226 | 245 | 20 | - | – | |
| MobiDBLite | 226 | 251 | 26 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 257 | 279 | 23 | - | – | |
| Phobius | 280 | 642 | 363 | - | – | |
| Gene3D | 312 | 421 | 110 | 1.9E-16 | – | |
| ProSiteProfiles | 346 | 642 | 297 | 24.457 | ||
| Pfam | 349 | 552 | 204 | 2.6E-26 | ||
| SUPERFAMILY | 350 | 613 | 264 | 4.91E-45 | ||
| ProSitePatterns | 352 | 384 | 33 | - | ||
| Gene3D | 422 | 637 | 216 | 6.1E-33 | – | |
| MobiDBLite | 618 | 642 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0396800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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