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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0438500 |
| Transcript ID | LotjaGi1g1v0438500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT4G28010.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010; TrEMBL-Plants: tr|G7L6K3|G7L6K3_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0438500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93346244..93354238) extracted from Lotus japonicus Gifu genome v1.2.
CTTAACCTATACTATGCTAATTAATCTCTTTTAATCCGTGTTTGAGATCAGAATTCATTCCCAAAGAAAAAAATGAACTG AAATTGGTTCCCTCCTCTATTCCTTTCTATGCAAACACGACACATCCCAGCCAGCCACCGAAATCTCACCAGCAGAACCA TGAAACCAAAACGCATCCTTGCCCCTCCTCGTACCAGGTTCTCTGCTCCGACCAGTGTATCTGCTTCTTCTTCAACGCCC CATGTAGAATCCCAGCGTAACAAACCCAATCCTCCTCTGTTGCTTTCTGTAGCCGTTTCTCTCTTTCAGCGTGCCATTCA GGACCCTGATTCATTGCCCTCAGTATCAGCCTGCAACTCCCTCATAGATAATCTCCGAAAGGCAAGACACTATGATCTTC TCTTGTCCGTTTATTCTATGATGGTTGCCGCTTCTGTTTTGCCTGCTTTTACTTCCTTGAGTGCTTTGGTTGAAAGTTTT GTGAAGACCCACCAGCCAAATTTTGCGTTTGGGGTACTGGGTTTGATGATGAAGCGTGGTTTTGAGGTTAATGTGTATAA CGCGAAGCTTGTGTTGAAGGGTTTTTGTCAAAGTGGTGACTATGACAGGGCCATGGTTTTGGTTTGCCAAATGAGGAGGA ATTGTGTTTTGCCTGATGTCTTTAGTTACAATACCCTTATAAATGGACTTTGTAAAGCTAAGAGATTGGTAGAAGCTAGG GGTTTGTTTGAGGCCATGAAGGCCGGGGAGTGCCGGCCGAACTTGGTGACTTTTAGTGTTTTGATTAATTGTCTTTGTAA GAATGGGGCGGTTAAGGAGGGTTTGGATTTGTTCGAGGAGATGAAGAAGACTGGTTTGGATGCAGATGTGGTTGTGTATA GTGCTCTCATTAGTGCCTTTTGTAACAGTGGTGACATTGAGAGGGTTAAAGAACTCTTTAATGAGATGTTGGAAAAGAAT GTTGCTCCCAATGTGGTTACTTATAGTTGTTTGATGCAAGGTCTTTGCAAGAAAGGGAAGTTGGAAGAAGCCTCCAAAAT GTTGAATGATATGACGACCAGGGGAGTTCATCCTGATGTTGTTGCTTATACAATTTTAGCTGATGGGCTTGGCAAAAATG GGAGGGCATCCGATGCATTGAAAGTGTTGGACTTGATGGTACAAAAGGGGAAAGAGCCAAATGCTTTAACATACAATGTC ATTGTTAATGGACTTTGTAAGGAAGGTCGGGTAGATGATGCGCTCGGGATTCTAGAAATGATGGTAAAGAAGGGGAGGAA ACCTGATGTGTTTACCTACAGCACATTATTGAAAGGACTATGTGGCGTTGGCAAAATTGATGAGGCAATGGACCTTTGGA AGTTGTTGTTGAGCAAAGAATTCCATATGAAGCCTGATGTCTACACGTTTAATCTTCTAATCCAGGGACTTTGCAAGGAG CGGCGTCTTGATGATGCTGTAGGGATCTATTCTACCATGGTTAAAAGGGGGTTCCCTTGTAACATAGTAACTTACAATAT TTTGATTCATGGTTATCTAAATGCTGGAAAGCTTACTAAGGCATTGGAACTATGGAAATCTGCAGTAGACTTGAAATTTT CCCCTAATTCAGTGACCTATAGTGTCATGATTAGTGGTCTTTGCAAAATGCAGATGCTTCGTTTCGCAAGAGGGCTTTTC GTTAAAAGAAGATATTCTAGGATTAGACCCACAGTAATTGATTACAATGCACTAATGGCATCGTTGTGTAGAGAAGGTAG TTTGAAGCAGGCTAGGGATTTGTTTCAAGAAATGAGAAATGTGAACTGTGATCCTGATGTTGTCTCCTTTAATATAATAA TTGATGGAATCCTCAAAGGAGGAGATGTTGAATCTGCCAAGGAATTGCTATTAGGAATGCTTAACATGGATTTGGTCCCT GATGCTTTTACCTTTACTATATTAATAAATAGGTTCTTCAAGCTTGGGAAGTTGGATGAGGCTATGTCTCTCTATGAGAG AATGGTCTCTTGTGGCCATGTACCAGATGCTGTTCTGTTTGATTCTTTGCTAAAAGGCTATAGTGTGATCGGAGAGACAG AAAAAATCATTTCATTGCTTCAACAAATGGGTGACAAGGGTGTTGTTCTGAACTCAAGATTAACTTCTACCATCTTGGCT TGTCTTTGTAACATCACAGAAGATCTTGATATAAAGAAGATTCTCCCAAATTTTTCGCAACATACATCTAAAGGAGCAAA CATTAAATGCAATGAACTATTGATGAGACTGAATAAGGTTCATCCAGAGCTTCAATTATTTGCTGCGGGATAGCTTTTGT TTTAAAAGAAGTGATGTCGTGGCACTTTTAAGTAAGTCTATATTGTCTTTCATTAAATAAACTATGTTCCATGCTTTATC TACTTTTATTGCATAGGTTAAATAGCCAGACTTATCAAGTTGGTTTGGTTTTATTTCAGTTGCTGTGTCTAATGCTAGCG CAGACTTGTTCAGTCTTGGTTTTGATCAGGTAAGACACTTCCTATCTGCTTTGTGCCTGCTTAGATCTGGGTTACTTTTC CATTCATTTCTCTAGTATATGAATGTTAGATAATTTTATCAATCCTATGGAGATGTCATTGTTACCTCCTCATGTATTGA AAAAGATCTTCCAAAGCGAGCCTTTATGTAAAGTAAAGGTGTATCCACCTTTAAATTGTTGTAGGTCTAGGTCCAAGTTA CGATGTTCTCCAAATTAAATCAATGGTGGATTATTTGCTCACTTTGGAGACAATCCAATAGGAAACAAAGAAGAACAGTT CTAGAAATGAGTATTATTCCACTAAAGAGGAGCTCAAAGTTCTTGCAAGAAGAGAAAAAAAAGACTCACCCCATCCTAGA GCCTAGGTCTCTAACTATTCTCAATGGTTTCCTTAATCCCTACTCTCCTCTCAGCATACGAATTTGGCCACGCCTCTAGT GAGCAGCTCCCTACACTACCTTCTTTCTCCTTGATTAAACTATCCAAGTCTTGGGTCCGCTTGGACCATGGTCTCTTTGG CTTCACTAACATTAGAACTCAGCTCGGCTCTATCATTACCAATAAGAGCCTTGTCCTCAAAAGGGTAAATTTGGAAATTG GCAGTGGATGATGAAGTGAACTCATCCTCCCAAGTAGTGTCATAAACAGATCTATTTTTCCCCTTAACCAGATATTGCTT ATAAGCTCCCCCATGTCTAATCACATCTTTGCTCGACAGAACTGTTTAAGGTTCATCGCTGTCATCCAACTCAGCTTCTT TGTCCTTCCGATAAAGAAGCTTATGTTGTGCCTGTTCCAACAGCCTTCTTCAATTGTGAAATCTGGAAAAACAGGATGGA TTAGGGAATTTGAACATTGTTGTCAAGATCGCTTCTTAATCATAAGATTGCACCATCATGGTCAGGTGGCTTCTCTGATC TAAATCGCAACCTCAGTTAAATTGCAGTTGGATCAGCGATCTTAAGCTTGAGATTGTGAGTTTTGAGCACTAGTTGTCTT GGTAAGACCGTAAGAATTATCATGCTATACTTACTCTCGTTGATCATGACATTTCTTTCTGGGTGTTGGTGCAATTAGGC ATTTTTTTTTTTTTCTTTTTGTTCCATTGAGTTTTCAGAAAATATGTTAGAACTGGTACCAAACAGAACAGAGAAACCGA ACTAGTCTGGCTCTGGCCTAACCAAACAGTTTCGCACCCTCCCTTAGGAAAGCAGAAATGCACCCCCCTTTAGGAAAAGC AGAGTTGCAAGTTAAGAGATAACTAGATAAGGAAAACTGGAAACGTTTATTAGAAATATCGCTCTTGAGAAGAATTACAA ACTGGACACCAATAGCAGCCACCAAATCCTAATTCTCCTAAAAACTCCCGAATAGAGGTACAGCCAACTTATTTATACTA AACCAAATAACCTAATAAAATATAATAGTAAAATATAGTATCTAATGCTGACTGGATAAATTAAACTAATAAAAATATAA AATCCTAATTCTATTTGGCTAGGTTTTCAGCACACCACCTTGTGCTGTTTGGCTAGGGTTCAGCACAACCCCATCCCTAT CTTGGTGCCTCACATAGACCTTAGTTATAGGAGGTTTAGGTCTAAGCCTGTCAAATTATTGAATAGAAGTATACATAACT GTGTAGCCAGTGTTTGTTCTGAGTGGATTGCTCTCATGTTTATGGTCTCTCTTACAAGTGTTTCAAATGAATTACCTTTT TAAGTGTGCAAGAGGGTGGGCAGTATTGCTAGTGTCACATGTGTAATGGTTTGTTGATATTCCACAAAGTCATTAATATA TTGTGTATTATTTGATCTGATATCAAATTTTGTGATAGTAAATTTTGTTCGGAAATTTGATTCTCATCTTGAGGCCAAGT CAAATTTCTCTCATGCCAATGAAACTTATGCTAATGGTCTTTATCCTAGGAGTGTTGAAATGCCCTCTGACATAGCTGAA AATGGAGAAGATTGCGAAGGAATAGAGCCGTGAATATGTTTTTCTTATCGTTCTAGTGTTGTAGGAGTATTTTGATTAGC ATGGAACTGGAGGGAATTGGATTGCTCTTCCTTAGAACGATGGTAAAATCACATCATCTGATAGGACACCGATCCTATCT ACAGGGAGAATATTATAGAAGAAATGAAATGCATTAATCACTGAATGGAAATCAAGGAAATAACCAGAGCTAAGCTCGCA GCTATGGACGAATCTCCATGCCCACGGCTTAGGCCAAAAAATTAACAAGCTAACATAATGCCCACATGAACTATCCCTCC ACTAACATAAACATACATTCTCTTTTCTCTAACTAACTATTTTTTCCCTCCTTTACTATTTTTGGTTTGGGTCAGTCTTT TGAGTCAAATGACCCACGATACCGCCTCCCTTAAAAGTTTCTTTGTCCTCAAGGCAGAATCATAGAAGTCAGGATATTGC CCACGAACTCACGAAGCACACCTTCTGCAACCCAAGTTGCTTCTACAGTAGGTTATACATCCACAAAATCAACCGCTCAT GGATGCTCTTTCCCCAATAGATGTTGGTTCGAGGAGCTAGATTTGCTTCTGGTTCCATTGGAATAGGCTCCTCTACCTCT AATCCATGAGGAACATCATGTCTTACAACATGACTGCCAATCGCCTTTTTATTTTGAGAAGCATGGAACACTGGATGTAT CTGGAATGTTTCTAGCAGCATCAAATTGTCAAGTTGCTGCATATTTCAATATATTGACGTGACAATATAAATTATAGAAA AGCACATCACACATTGGTCAAGGTTCATTAGTTTGGCCTAGTATGTTACTTTTGAACTCTGCATATAATGAACCTTTACC TAAAGAGTTTCTCTCAAACATGCTGGTTGCTAAATAGCTACGGAAGCAAAGGGAAGACTAAGTTGGAACCTATCAAATTA TATATAGAGAGATATATAAAAAATATGTGTGGCATGAGATTGATTAAATTTTGAGTCATTTTGATTGATTTTAAACTCTA GTATTTCAATAGAGAAATTGGTGCAATGGATATAATAGATACAAGTCTCTTAACTTAATACCATTCATAGCATGTTGACC AAAATAAACATTGTTTGTGGTATGAAGAATAAACATTTCTATAGAGTAATGCAATGGCTATTTGGGTACATGAATCTTGT AAAAAAATTGGATCTGCTGTTTCTAGCAGCAAGCATGCAGGTTGTCCACAATCCTTGCAGCTGCAAAAAATGGCAAGCAT ATAAAGGTTAAAAAAAACTGAGATGTCATTTCACTTTGCATCAAGTTTGTGCTGTTGTTATTTTACTTTGTGACCATGTA GTGGTCCAGCCATCCCACTGTCATCAATTGGAAAGAAGCTTAATTTTTTTGATTTTAGTAGAGACAAGAATGATAACAGT TTATTGTCCTTAACATATCATCAGATTTTTCCGACAACTCTTGGCATTATTTAGCATTCTATCAGATGGCTCTCTCTATT TCGGCTCATTGCTGCACTTGGTAGAACACTAGTTGTTTCTATTTCACTAAGTACCTTGTCATTGCAAGTGGTATTTGTGC TAGGAAATTTTACTGTGGCCAAAGGCAAGTCACTTATGACTTCTTAATTTTGCATACACCTTTTAGCTTAACATGTTATT TACAAACAACAAAGACAAATTTGTATGAAACCAGTGTTAGTTACTTATATTACATGAACTTTAAACATTGTAAAATATCC TTTGCAACCAAATACAGACTCTAGAATTGATGCACCTACATTTGGAAAACTACTTCTCATCTAGAGGTTTACATTATGAA GATTATTGGTATTGGATCTGCATTGGTTTTTGCTTGGGTTTTCTCTTCTCTTTAACCTTCTTTTCTTTACTGCATTGACA TATTTGAATCGCATGTTATATATTCTTTTAATTTTCAAGGCCTCTGATCGATTAAACTTTTCACTGTTGGTAACCATTTT AATGTTAGACCAAAATTTCAGATTTAGGAGATTCAGAAGCGGTCATTGCGGATGGAGGTCACAAGAAGAATGAAAGTCCA TTATCTTGACAACCTTTAAATTGTCATCAATTGTAGGAGGAGAGCAGTCACACCATGGAAACGAGAAGAGACGAGGAGGA AAATGAATGTGTGAGAAAACAGCGGTTGAAATTGTGGAACAACAAGGAAATAGGGATTTACTAAAGGGAGGCAAGTTCGT ACCAGAGGTGGGGAGGAGGATGACGTCAGGCTCAAAGGAGGCACGTGAGGGTTTTTTGGAATTTGTTAATCTTAGCCATT AATCTTAATCCAAGGGTTAGAAATTGCCCCTCTCACTCTCGCATAAAAAACCTCCCTTTCACTAGATATGCTCCCTATAC ATAAGATGATGACTTTGATATATGATTAGGTCTAAATAGATCATATAGATGTGGAAAAAGTTGCGGAGTGAGTTGGGTTC ACTATCTCGGGGCCATCACTGTTCTTGGACGAGGAAGACAATAATTTCTGTAGCCTTTAAGCTAACATTGGTAGCAGGTA TACATTATTAGAACATTTTTATGCACTGTAGAGTATAGATATATAGCTACACCCACCAGTGATTTTGCTTCAACAATTTT TTTTGGCTCATCCTGACTTGCAATTAAATCTGAAATCATTTATCCAGACCAAGATTATTCACATGGACATTCTTTTACCC CTTTTCCTTCAATCAAGGACGAATTTCTCTGGTGAAATTCATTAAAGGGTGTAAACATAATAACTATGAATTTTGACTAC CATTTGTCATTATCTAGAATCTGTCTTGTTTGGAAAGCTGATCTTCCACTTGGATGCCAAGTTTAGATCTAGCGACATCA CCCACTCAGATGTTTGACTGATGAAGACATTTATTTATTTTCCTTCACAATATTGCAGGTATTCAATGATAGCTGCTCAG TGGCCAGAAAGGACTGACAATGATATCAAGATCTACTGGAACGCCAAACTAAAGAAGAAGCTCATGGATTTGTTTCCTGC ATCTTATTAGATGAAACAAACTTATCGGTCTCTCCTCAAAACCCACTATTTCCTTCTCATTATAGAGACTATTGCAGCCC AACAGAAACCATGTCTTCAAGTGGCCTTGGACCGGTCTCCGATCCTTCAAGTGTTTAGACGGGCACAAGATGCAATATTT TGAAGTGAAGGACGTTGCAGTTTGATAGGTTGCTGTGTGAACAGTACCTGGGTTGCTTTAATTTAAATTAAGTCAGTTAT GGACAGTTTGTGTTAGTTATTAGTTACTACTTACTAGTTGTGGGTAGTTTTATGATTACAGCAGTTAGGTAATTGCTATG GTTTGAACTTAAATTTAAATTATACAGGAGTAGTTATAAATAAGAGTTGTATCTTCTGTTAGGATTCATTCAGAAGTTGT GAGTTTAATGGGGAGAGACTGGACTCTCGAAATTCCAGAATCTACTTGAGAAAGACTGGCTCTCGAACACGAATG
CDS sequence (LotjaGi1g1v0438500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAACACGACACATCCCAGCCAGCCACCGAAATCTCACCAGCAGAACCATGAAACCAAAACGCATCCTTGCCCCTCC TCGTACCAGGTTCTCTGCTCCGACCAGTGTATCTGCTTCTTCTTCAACGCCCCATGTAGAATCCCAGCGTAACAAACCCA ATCCTCCTCTGTTGCTTTCTGTAGCCGTTTCTCTCTTTCAGCGTGCCATTCAGGACCCTGATTCATTGCCCTCAGTATCA GCCTGCAACTCCCTCATAGATAATCTCCGAAAGGCAAGACACTATGATCTTCTCTTGTCCGTTTATTCTATGATGGTTGC CGCTTCTGTTTTGCCTGCTTTTACTTCCTTGAGTGCTTTGGTTGAAAGTTTTGTGAAGACCCACCAGCCAAATTTTGCGT TTGGGGTACTGGGTTTGATGATGAAGCGTGGTTTTGAGGTTAATGTGTATAACGCGAAGCTTGTGTTGAAGGGTTTTTGT CAAAGTGGTGACTATGACAGGGCCATGGTTTTGGTTTGCCAAATGAGGAGGAATTGTGTTTTGCCTGATGTCTTTAGTTA CAATACCCTTATAAATGGACTTTGTAAAGCTAAGAGATTGGTAGAAGCTAGGGGTTTGTTTGAGGCCATGAAGGCCGGGG AGTGCCGGCCGAACTTGGTGACTTTTAGTGTTTTGATTAATTGTCTTTGTAAGAATGGGGCGGTTAAGGAGGGTTTGGAT TTGTTCGAGGAGATGAAGAAGACTGGTTTGGATGCAGATGTGGTTGTGTATAGTGCTCTCATTAGTGCCTTTTGTAACAG TGGTGACATTGAGAGGGTTAAAGAACTCTTTAATGAGATGTTGGAAAAGAATGTTGCTCCCAATGTGGTTACTTATAGTT GTTTGATGCAAGGTCTTTGCAAGAAAGGGAAGTTGGAAGAAGCCTCCAAAATGTTGAATGATATGACGACCAGGGGAGTT CATCCTGATGTTGTTGCTTATACAATTTTAGCTGATGGGCTTGGCAAAAATGGGAGGGCATCCGATGCATTGAAAGTGTT GGACTTGATGGTACAAAAGGGGAAAGAGCCAAATGCTTTAACATACAATGTCATTGTTAATGGACTTTGTAAGGAAGGTC GGGTAGATGATGCGCTCGGGATTCTAGAAATGATGGTAAAGAAGGGGAGGAAACCTGATGTGTTTACCTACAGCACATTA TTGAAAGGACTATGTGGCGTTGGCAAAATTGATGAGGCAATGGACCTTTGGAAGTTGTTGTTGAGCAAAGAATTCCATAT GAAGCCTGATGTCTACACGTTTAATCTTCTAATCCAGGGACTTTGCAAGGAGCGGCGTCTTGATGATGCTGTAGGGATCT ATTCTACCATGGTTAAAAGGGGGTTCCCTTGTAACATAGTAACTTACAATATTTTGATTCATGGTTATCTAAATGCTGGA AAGCTTACTAAGGCATTGGAACTATGGAAATCTGCAGTAGACTTGAAATTTTCCCCTAATTCAGTGACCTATAGTGTCAT GATTAGTGGTCTTTGCAAAATGCAGATGCTTCGTTTCGCAAGAGGGCTTTTCGTTAAAAGAAGATATTCTAGGATTAGAC CCACAGTAATTGATTACAATGCACTAATGGCATCGTTGTGTAGAGAAGGTAGTTTGAAGCAGGCTAGGGATTTGTTTCAA GAAATGAGAAATGTGAACTGTGATCCTGATGTTGTCTCCTTTAATATAATAATTGATGGAATCCTCAAAGGAGGAGATGT TGAATCTGCCAAGGAATTGCTATTAGGAATGCTTAACATGGATTTGGTCCCTGATGCTTTTACCTTTACTATATTAATAA ATAGGTTCTTCAAGCTTGGGAAGTTGGATGAGGCTATGTCTCTCTATGAGAGAATGGTCTCTTGTGGCCATGTACCAGAT GCTGTTCTGTTTGATTCTTTGCTAAAAGGCTATAGTGTGATCGGAGAGACAGAAAAAATCATTTCATTGCTTCAACAAAT GGGTGACAAGGGTGTTGTTCTGAACTCAAGATTAACTTCTACCATCTTGGCTTGTCTTTGTAACATCACAGAAGATCTTG ATATAAAGAAGATTCTCCCAAATTTTTCGCAACATACATCTAAAGGAGCAAACATTAAATGCAATGAACTATTGATGAGA CTGAATAAGGTTCATCCAGAGCTTCAATTATTTGCTGCGGGATAG
Protein sequence (LotjaGi1g1v0438500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTRHIPASHRNLTSRTMKPKRILAPPRTRFSAPTSVSASSSTPHVESQRNKPNPPLLLSVAVSLFQRAIQDPDSLPSVS ACNSLIDNLRKARHYDLLLSVYSMMVAASVLPAFTSLSALVESFVKTHQPNFAFGVLGLMMKRGFEVNVYNAKLVLKGFC QSGDYDRAMVLVCQMRRNCVLPDVFSYNTLINGLCKAKRLVEARGLFEAMKAGECRPNLVTFSVLINCLCKNGAVKEGLD LFEEMKKTGLDADVVVYSALISAFCNSGDIERVKELFNEMLEKNVAPNVVTYSCLMQGLCKKGKLEEASKMLNDMTTRGV HPDVVAYTILADGLGKNGRASDALKVLDLMVQKGKEPNALTYNVIVNGLCKEGRVDDALGILEMMVKKGRKPDVFTYSTL LKGLCGVGKIDEAMDLWKLLLSKEFHMKPDVYTFNLLIQGLCKERRLDDAVGIYSTMVKRGFPCNIVTYNILIHGYLNAG KLTKALELWKSAVDLKFSPNSVTYSVMISGLCKMQMLRFARGLFVKRRYSRIRPTVIDYNALMASLCREGSLKQARDLFQ EMRNVNCDPDVVSFNIIIDGILKGGDVESAKELLLGMLNMDLVPDAFTFTILINRFFKLGKLDEAMSLYERMVSCGHVPD AVLFDSLLKGYSVIGETEKIISLLQQMGDKGVVLNSRLTSTILACLCNITEDLDIKKILPNFSQHTSKGANIKCNELLMR LNKVHPELQLFAAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 96 | 96 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 39 | 39 | - | – | |
| MobiDBLite | 1 | 53 | 53 | - | – | |
| MobiDBLite | 31 | 53 | 23 | - | – | |
| Gene3D | 58 | 211 | 154 | 1.3E-27 | ||
| PANTHER | 66 | 248 | 183 | 2.6E-215 | – | |
| ProSiteProfiles | 78 | 112 | 35 | 8.155 | ||
| Phobius | 97 | 121 | 25 | - | – | |
| TMHMM | 98 | 120 | 23 | - | – | |
| ProSiteProfiles | 113 | 147 | 35 | 6.906 | ||
| Phobius | 122 | 734 | 613 | - | – | |
| PANTHER | 141 | 318 | 178 | 2.6E-215 | – | |
| ProSiteProfiles | 148 | 182 | 35 | 9.24 | ||
| TIGRFAM | 155 | 184 | 30 | 1.2E-4 | ||
| Pfam | 155 | 178 | 24 | 0.012 | ||
| Pfam | 182 | 231 | 50 | 3.2E-17 | ||
| ProSiteProfiles | 183 | 217 | 35 | 12.792 | ||
| TIGRFAM | 185 | 218 | 34 | 3.1E-9 | ||
| SUPERFAMILY | 186 | 423 | 238 | 8.53E-8 | ||
| Gene3D | 212 | 282 | 71 | 5.8E-23 | ||
| ProSiteProfiles | 218 | 252 | 35 | 12.518 | ||
| TIGRFAM | 220 | 253 | 34 | 9.5E-8 | ||
| Pfam | 253 | 301 | 49 | 1.8E-17 | ||
| ProSiteProfiles | 253 | 287 | 35 | 13.296 | ||
| TIGRFAM | 255 | 289 | 35 | 4.6E-9 | ||
| Gene3D | 283 | 351 | 69 | 5.5E-22 | ||
| PANTHER | 286 | 421 | 136 | 2.6E-215 | – | |
| ProSiteProfiles | 288 | 322 | 35 | 13.417 | ||
| TIGRFAM | 290 | 324 | 35 | 1.3E-9 | ||
| Pfam | 318 | 351 | 34 | 1.1E-7 | ||
| PANTHER | 321 | 524 | 204 | 2.6E-215 | – | |
| ProSiteProfiles | 323 | 357 | 35 | 11.674 | ||
| TIGRFAM | 325 | 359 | 35 | 5.8E-7 | ||
| Gene3D | 352 | 422 | 71 | 7.5E-22 | ||
| Pfam | 357 | 405 | 49 | 3.6E-17 | ||
| ProSiteProfiles | 358 | 392 | 35 | 13.548 | ||
| TIGRFAM | 361 | 394 | 34 | 1.1E-9 | ||
| ProSiteProfiles | 393 | 427 | 35 | 11.005 | ||
| TIGRFAM | 395 | 425 | 31 | 6.8E-6 | ||
| SUPERFAMILY | 407 | 659 | 253 | 4.45E-8 | – | |
| Gene3D | 423 | 526 | 104 | 6.4E-27 | ||
| Pfam | 427 | 457 | 31 | 8.9E-10 | ||
| ProSiteProfiles | 430 | 464 | 35 | 12.266 | ||
| TIGRFAM | 432 | 465 | 34 | 5.8E-8 | ||
| ProSiteProfiles | 465 | 499 | 35 | 11.477 | ||
| Pfam | 465 | 513 | 49 | 1.4E-15 | ||
| TIGRFAM | 467 | 500 | 34 | 5.2E-8 | ||
| PANTHER | 497 | 721 | 225 | 2.6E-215 | – | |
| ProSiteProfiles | 500 | 534 | 35 | 9.536 | ||
| Gene3D | 527 | 599 | 73 | 1.5E-18 | ||
| Pfam | 534 | 581 | 48 | 3.2E-13 | ||
| ProSiteProfiles | 535 | 569 | 35 | 11.849 | ||
| TIGRFAM | 539 | 571 | 33 | 2.3E-8 | ||
| ProSiteProfiles | 570 | 604 | 35 | 10.369 | ||
| TIGRFAM | 572 | 606 | 35 | 2.1E-5 | ||
| Gene3D | 600 | 704 | 105 | 1.8E-19 | ||
| Pfam | 601 | 633 | 33 | 1.3E-8 | ||
| ProSiteProfiles | 605 | 639 | 35 | 12.54 | ||
| TIGRFAM | 607 | 641 | 35 | 2.1E-9 | ||
| ProSiteProfiles | 640 | 674 | 35 | 9.372 | ||
| Pfam | 643 | 672 | 30 | 0.07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0438500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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