Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0445500 |
| Transcript ID | LotjaGi1g1v0445500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT3G05650.1 receptor like protein 32; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A0B2S1W3|A0A0B2S1W3_GLYSO Receptor-like protein 12; Found in the gene: LotjaGi1g1v0445500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94415450..94418542) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTATACACTTAACCCATCCATTTCCTCTCTAAATATCATTACAATGAGATTTCATCTAGTCTTGTTGTCTTTCTTTA TACCCTTATGTTTGATAAATTTGAGTTTCAATATCTATGTAGCAACAAGCCACTGCCTTGGCCATCAGCAAGTCTTGTTG CTCCACATGAAGCAAAATCTTCAATTCAACCCAACCAAATCCAAAAAACTAGTGACATGGAATCAAAGTGAGGATTGCTG TGAATGGAATGGAGTCACATGCCACAATGAACATGTTATTGGTCTAGACTTGAGTGAGGAATTTATTTCTGGTGCTCTAG ACAACTCAAGCCTTTCCAACTTGGAAAGTTTGCAGGATTTGAATTTAGCTTATAATGATTTCCAATCTTCGATTCCTTCA GAGATTTTCAAGATAGAGAATTTGAGGTATTTGAATCTAAGCAACACAAATTTCTCTGGAAGTTTACCAGGTGCTATTTC CAAATTGAAGAAGTTATCAACCTTAGATCTATCTAACTGCCAGTTCAATGGAACACTCCCTGTTTCATTTTCAGGACTCA TTGAACTTGTTCACTTGGATTTGTCATTCAACAATTTCACTGGACCTCTTCCATCTCTTAATATGTTCAAGAATCTCAAA TTTTTATCCCTTTTCCAAAATGGTTTTACTGGGCCAATTACAACAACTCATTGGGAGGGGCTTTTAAATCTCACTAGCAT CCATTTTGGTGATAACACTTTCAATGGAAAAGTTCCCTCATCTCTTTTCACACTTCTATCTCTACGGGAGCTTATTCTTT CTCATAATCGATTTTCAGGTTCATTGGATGAATTTCCAATTCCAAATGCCTCTCTGTCTGCATTAAACATGGTTGATTTG AGCAACAACGAGTTGCAAGGGCCTATTCCTATGTCTTTGTTTCGTCTGCCAAGTCTCGGTTACCTCCATCTTTCTTTAAA TCAATTCAATGGAACTCTGAGGCTAGATTTGTTACAGAACCTCCAAAATCTGCGCGCTTTAGGCATATCACACAACAACT TGTCCGTTAATGCCACTTTCAATGGATCGTTTCCAAGTTTGGTAGTTCTACTTCTTGGAAGTTGCAAGTTGAGGGAATTT CCTGCTTTTTTGAGAAACCAATCCCAATTAAGGGCTCTAGACATATCCAATAACCAAATTCAAGGAACAATACCGAACTG GATTTGGAGATTTGAATACATGGTTAATATGAATCTTTCCAATAATTTTCTGACAGGCTTGGATGGACCCTTTGAAAATC TCAGTTCTAGTACTTTTGTGTTGGACCTTCATTCCAACCAACTTCAAGGGTCTATTCCAATTTTGACAAAAAATGCTGTG TATTTGGATTATTCAAGTAACAAGTTCATGTTTATCCCACCAGACATAAGAGAGTATCTTAATTACACATATTTCTTGTC CCTTTCAAACAATAGCTTCCATGGAAAAATCCCTCAATCCTTTTGTGGCTGTCCGACGCTTCGAATGCTTGATCTTTCCC ACAATAGCTTCAATGGCTCCATTCCGGAGTGTTTGATCTCAAGGAGCGGTTCTCTAAGGGCGTTAAATATACTTGGAAAC AAACTATCAGGTTCAATTTCTGATACAATTTCAAGTTCATGTAATCTAAGGTTTCTTAATCTTAATGAGAATCTCTTGGA GGGTACCATTCCAAAATCTTTAATCAATTGTAAGAGCCTACAAGTCTTGAACCTTGGAAACAATGTGTTCAGGGACAGAT TTCCATGCTTCTTGAGGAATATCTCTGCACTTCAAGTGTTGATTTTACGGTCAAACAAACTCCATGGTTCAATTCGATGC CAGCGGAACAATGGTAGTACTTGGAAGATGCTTCATATTGTTGATATAGCCTTGAATGATTTCACTGGTAGGCTTCCGGG ACCACTATTGAAAAGTTGGATAGCAATGAAAGGTGATGAAGATGATTCAGGAGAAAAATCCGGTAACTTATTTTTCGACA TCTATGATTTCCATCACTCTGTGCGTTACAAGGATTTGTTGGCGAGTATCGACAAAGTTCTTGTTATGAAACTGGCTCAA CTTCAAGTTGGTGAACCACTTTCCACCATTGAAAACTTGTTCTCTTACTTTGTCAATGCCTACCAATTTCAATGGGGTGG ATCCTATCTTGATTCAGTTACTGTTGTCAGCAAAGGCTTGCAGATGAACTTAGTCAAAATTCTAGCAGTCTTTACTTTCT TGGATTTCTCATCTAACCACTTTGAAGGTTCAATACCAGAAGAGGTGATGAGTTTGAGAGCAATTAATGTTCTTAACTTG TCACACAATGCTTTCTCTAGCCATATCCCTTCATCACTTGGAAACTTGACTCAAATTGAGTCATTAGACCTATCAAGTAA TAATTTGAGTGGAGTGATTCCCACAGAGATTGCAAGTTTGTCTTTCCTCTCAGTTTTGAACCTCTCCTATAATCATTTGG TTGGGAAGATTCCAACCGGCACTCAAATTCAGACTTTTGAAGAAGATTCTTTTGTGGGCAATGAAGGGTTATGTGGACCT CCACTGAATAAAAATTGTGGTCATGTTGAGTTACCTACAGGAGCACCATCATCATATGCAGGTTATGAAACAGAGAGTTC AATTGATTGGAACTTTTTGAGCGCTGAGTTGGGATTCACTATTGGGTTTGGATGTGTGATACTTCCCCTTCTTTTATGGA AGAGATGGAGGTTGTGGTATAGCAAGCATGTCGATGAATTGCTTTTCAGGATGTTTCCTCAGCTTGATTTTGTATATATA TTCCATGGAGGGAAGAAATACAGGACTCTAAAGTGGAGGTTCAACTAGCTAGCTGCTCTCAGCTCTCATTATAGCTTGTT AAGCATGACTATTGTTTGCTAGCTAATTTCGCTTCGGATACCTCTTTTTCTTATATTTTGTGTCAATGTAATGAACTACC AATGCCATAGCTACCTTTGATTCTTCTTTTCTCAACCTGTACTTGATTGGGATATACTCCTGATTACAAGACGAGGGTGT ATCCATAATTTTCTTCTTGGGATAAATAAAAACTATTCATGTGCTCTTTCCCA
CDS sequence (LotjaGi1g1v0445500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATTTCATCTAGTCTTGTTGTCTTTCTTTATACCCTTATGTTTGATAAATTTGAGTTTCAATATCTATGTAGCAAC AAGCCACTGCCTTGGCCATCAGCAAGTCTTGTTGCTCCACATGAAGCAAAATCTTCAATTCAACCCAACCAAATCCAAAA AACTAGTGACATGGAATCAAAGTGAGGATTGCTGTGAATGGAATGGAGTCACATGCCACAATGAACATGTTATTGGTCTA GACTTGAGTGAGGAATTTATTTCTGGTGCTCTAGACAACTCAAGCCTTTCCAACTTGGAAAGTTTGCAGGATTTGAATTT AGCTTATAATGATTTCCAATCTTCGATTCCTTCAGAGATTTTCAAGATAGAGAATTTGAGGTATTTGAATCTAAGCAACA CAAATTTCTCTGGAAGTTTACCAGGTGCTATTTCCAAATTGAAGAAGTTATCAACCTTAGATCTATCTAACTGCCAGTTC AATGGAACACTCCCTGTTTCATTTTCAGGACTCATTGAACTTGTTCACTTGGATTTGTCATTCAACAATTTCACTGGACC TCTTCCATCTCTTAATATGTTCAAGAATCTCAAATTTTTATCCCTTTTCCAAAATGGTTTTACTGGGCCAATTACAACAA CTCATTGGGAGGGGCTTTTAAATCTCACTAGCATCCATTTTGGTGATAACACTTTCAATGGAAAAGTTCCCTCATCTCTT TTCACACTTCTATCTCTACGGGAGCTTATTCTTTCTCATAATCGATTTTCAGGTTCATTGGATGAATTTCCAATTCCAAA TGCCTCTCTGTCTGCATTAAACATGGTTGATTTGAGCAACAACGAGTTGCAAGGGCCTATTCCTATGTCTTTGTTTCGTC TGCCAAGTCTCGGTTACCTCCATCTTTCTTTAAATCAATTCAATGGAACTCTGAGGCTAGATTTGTTACAGAACCTCCAA AATCTGCGCGCTTTAGGCATATCACACAACAACTTGTCCGTTAATGCCACTTTCAATGGATCGTTTCCAAGTTTGGTAGT TCTACTTCTTGGAAGTTGCAAGTTGAGGGAATTTCCTGCTTTTTTGAGAAACCAATCCCAATTAAGGGCTCTAGACATAT CCAATAACCAAATTCAAGGAACAATACCGAACTGGATTTGGAGATTTGAATACATGGTTAATATGAATCTTTCCAATAAT TTTCTGACAGGCTTGGATGGACCCTTTGAAAATCTCAGTTCTAGTACTTTTGTGTTGGACCTTCATTCCAACCAACTTCA AGGGTCTATTCCAATTTTGACAAAAAATGCTGTGTATTTGGATTATTCAAGTAACAAGTTCATGTTTATCCCACCAGACA TAAGAGAGTATCTTAATTACACATATTTCTTGTCCCTTTCAAACAATAGCTTCCATGGAAAAATCCCTCAATCCTTTTGT GGCTGTCCGACGCTTCGAATGCTTGATCTTTCCCACAATAGCTTCAATGGCTCCATTCCGGAGTGTTTGATCTCAAGGAG CGGTTCTCTAAGGGCGTTAAATATACTTGGAAACAAACTATCAGGTTCAATTTCTGATACAATTTCAAGTTCATGTAATC TAAGGTTTCTTAATCTTAATGAGAATCTCTTGGAGGGTACCATTCCAAAATCTTTAATCAATTGTAAGAGCCTACAAGTC TTGAACCTTGGAAACAATGTGTTCAGGGACAGATTTCCATGCTTCTTGAGGAATATCTCTGCACTTCAAGTGTTGATTTT ACGGTCAAACAAACTCCATGGTTCAATTCGATGCCAGCGGAACAATGGTAGTACTTGGAAGATGCTTCATATTGTTGATA TAGCCTTGAATGATTTCACTGGTAGGCTTCCGGGACCACTATTGAAAAGTTGGATAGCAATGAAAGGTGATGAAGATGAT TCAGGAGAAAAATCCGGTAACTTATTTTTCGACATCTATGATTTCCATCACTCTGTGCGTTACAAGGATTTGTTGGCGAG TATCGACAAAGTTCTTGTTATGAAACTGGCTCAACTTCAAGTTGGTGAACCACTTTCCACCATTGAAAACTTGTTCTCTT ACTTTGTCAATGCCTACCAATTTCAATGGGGTGGATCCTATCTTGATTCAGTTACTGTTGTCAGCAAAGGCTTGCAGATG AACTTAGTCAAAATTCTAGCAGTCTTTACTTTCTTGGATTTCTCATCTAACCACTTTGAAGGTTCAATACCAGAAGAGGT GATGAGTTTGAGAGCAATTAATGTTCTTAACTTGTCACACAATGCTTTCTCTAGCCATATCCCTTCATCACTTGGAAACT TGACTCAAATTGAGTCATTAGACCTATCAAGTAATAATTTGAGTGGAGTGATTCCCACAGAGATTGCAAGTTTGTCTTTC CTCTCAGTTTTGAACCTCTCCTATAATCATTTGGTTGGGAAGATTCCAACCGGCACTCAAATTCAGACTTTTGAAGAAGA TTCTTTTGTGGGCAATGAAGGGTTATGTGGACCTCCACTGAATAAAAATTGTGGTCATGTTGAGTTACCTACAGGAGCAC CATCATCATATGCAGGTTATGAAACAGAGAGTTCAATTGATTGGAACTTTTTGAGCGCTGAGTTGGGATTCACTATTGGG TTTGGATGTGTGATACTTCCCCTTCTTTTATGGAAGAGATGGAGGTTGTGGTATAGCAAGCATGTCGATGAATTGCTTTT CAGGATGTTTCCTCAGCTTGATTTTGTATATATATTCCATGGAGGGAAGAAATACAGGACTCTAAAGTGGAGGTTCAACT AG
Protein sequence (LotjaGi1g1v0445500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRFHLVLLSFFIPLCLINLSFNIYVATSHCLGHQQVLLLHMKQNLQFNPTKSKKLVTWNQSEDCCEWNGVTCHNEHVIGL DLSEEFISGALDNSSLSNLESLQDLNLAYNDFQSSIPSEIFKIENLRYLNLSNTNFSGSLPGAISKLKKLSTLDLSNCQF NGTLPVSFSGLIELVHLDLSFNNFTGPLPSLNMFKNLKFLSLFQNGFTGPITTTHWEGLLNLTSIHFGDNTFNGKVPSSL FTLLSLRELILSHNRFSGSLDEFPIPNASLSALNMVDLSNNELQGPIPMSLFRLPSLGYLHLSLNQFNGTLRLDLLQNLQ NLRALGISHNNLSVNATFNGSFPSLVVLLLGSCKLREFPAFLRNQSQLRALDISNNQIQGTIPNWIWRFEYMVNMNLSNN FLTGLDGPFENLSSSTFVLDLHSNQLQGSIPILTKNAVYLDYSSNKFMFIPPDIREYLNYTYFLSLSNNSFHGKIPQSFC GCPTLRMLDLSHNSFNGSIPECLISRSGSLRALNILGNKLSGSISDTISSSCNLRFLNLNENLLEGTIPKSLINCKSLQV LNLGNNVFRDRFPCFLRNISALQVLILRSNKLHGSIRCQRNNGSTWKMLHIVDIALNDFTGRLPGPLLKSWIAMKGDEDD SGEKSGNLFFDIYDFHHSVRYKDLLASIDKVLVMKLAQLQVGEPLSTIENLFSYFVNAYQFQWGGSYLDSVTVVSKGLQM NLVKILAVFTFLDFSSNHFEGSIPEEVMSLRAINVLNLSHNAFSSHIPSSLGNLTQIESLDLSSNNLSGVIPTEIASLSF LSVLNLSYNHLVGKIPTGTQIQTFEEDSFVGNEGLCGPPLNKNCGHVELPTGAPSSYAGYETESSIDWNFLSAELGFTIG FGCVILPLLLWKRWRLWYSKHVDELLFRMFPQLDFVYIFHGGKKYRTLKWRFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 5 | 133 | 129 | 2.2E-224 | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| PANTHER | 5 | 133 | 129 | 2.2E-224 | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 28 | 12 | - | – | |
| Gene3D | 25 | 190 | 166 | 3.1E-47 | ||
| Phobius | 29 | 869 | 841 | - | – | |
| Pfam | 37 | 72 | 36 | 4.9E-7 | ||
| SUPERFAMILY | 46 | 378 | 333 | 8.16E-54 | – | |
| SMART | 99 | 123 | 25 | 11.0 | ||
| Pfam | 115 | 160 | 46 | 8.4E-7 | ||
| PANTHER | 129 | 910 | 782 | 2.2E-224 | – | |
| PANTHER | 129 | 910 | 782 | 2.2E-224 | – | |
| SMART | 147 | 170 | 24 | 75.0 | ||
| SMART | 171 | 196 | 26 | 150.0 | ||
| Gene3D | 191 | 264 | 74 | 2.1E-12 | ||
| SMART | 243 | 266 | 24 | 140.0 | ||
| Gene3D | 265 | 337 | 73 | 1.6E-11 | ||
| SMART | 294 | 318 | 25 | 300.0 | ||
| SMART | 319 | 340 | 22 | 210.0 | ||
| Gene3D | 338 | 435 | 98 | 4.6E-18 | ||
| SMART | 342 | 365 | 24 | 180.0 | ||
| Pfam | 367 | 386 | 20 | 1.7 | ||
| PRINTS | 368 | 381 | 14 | 5.2E-5 | – | |
| SUPERFAMILY | 433 | 840 | 408 | 1.21E-55 | – | |
| Pfam | 441 | 494 | 54 | 1.8E-6 | ||
| SMART | 750 | 773 | 24 | 160.0 | ||
| Pfam | 753 | 811 | 59 | 2.0E-7 | ||
| SMART | 774 | 797 | 24 | 70.0 | ||
| PRINTS | 774 | 787 | 14 | 5.2E-5 | – | |
| SMART | 798 | 831 | 34 | 240.0 | ||
| TMHMM | 868 | 890 | 23 | - | – | |
| Phobius | 870 | 891 | 22 | - | – | |
| Phobius | 892 | 933 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0445500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…