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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0609600 |
| Transcript ID | LotjaGi1g1v0609600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase, putative; TAIR: AT5G40380.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 42; Swiss-Prot: sp|Q9FNE1|CRK42_ARATH Cysteine-rich receptor-like protein kinase 42; TrEMBL-Plants: tr|A0A0L9U666|A0A0L9U666_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0609600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:115387421..115391302) extracted from Lotus japonicus Gifu genome v1.2.
CAACAACACCAACAAGAATAAGAAATTTTTGAGGTTGATTGATTGCCTTTGTCCCCCCCTCAAACTCTCTTATTCTCTTG CCTCTTCTTCCAACAAACTTGCAGCAAGGAAGAACAAGTTGTCTTAAAAACAATAACTCTCCCACAAGGTAGGAAGAGAA AGAAACAGTCACAAAACTATAACCATTAACAACAGAATAGGACACACCCTGAAATGGCACCATGGCTTCTCTTATACACC ATAGTTTTCTTCTTCTCATGGTGCTCATCACCCTCACTCTGTGACCCAAGAATCTCAGAAGCAGGACTCTACTGCGGCAC AACGAGAGCACCATTGAAAGCTAACTTCATCCCAAGCTTTATCAAAGAAATGGAGAATCTCTCTCAGCTGGTAACTGACC ACAACTGGGGCACTCACTCCGTCAACATCTCCGGCAGCATCCCCATCTACGGCTTCGCGCAGTGCTTCCACGACCTCTCC CACACTGACTGCCTCCTCTGCTACGCCGCCAGCCGGACCAGGCTCCCCCGCTGCCTCCCTTCCCTCTCTGCTCGTATCTA CCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGTTTCTACTCCGAGCGGACTGACCCTGCCAGGGATGCGGTGAACT GCAGCTCGAGGCGCGGCGCGGCAGGTGGCGGAGTGGAGAGGTTGAGGCTGGAGAGGAGTGTAGGGAAGGTTCTTGATGGA GTGGCTGTGAAGGCTGTGGCCAAGGGTGGTGGTTTTGCGGTGGGAGGAGGTGAGGGTGTTTATGCATTGGCGCAGTGCTG GAAAACGGTTAGCAATGAGGGGTGTAGAGATTGCTTGAGGAAAGCTGTGAAGGAGGTTAGAGGGTGCTTGCCTAATAGGG AAGGGAGGGCATTGAATGCTGGGTGTTATTTGAGATACTCAACTGAGAAGTTCTATAATGAAAAAGGTGGAGAGTCTGAT AGTCAACATGGTAAGAACTGTAATTGAAATTGAGAAATTTAAATTTGAATCCCATCTGGGATTTTTTTTTTGAAAAATAT GTTTTTAGTATGTAATTTGAAGTTCATTCTCTTTTGCAAAACATCATTATGTTGCTCAAGTGCTTTTCAAATTTCCTACA CTTCTCAACTTTGGCCTAAAAAGACTCCGATCCAGATCTTAGTGCATACTTGGATACACGGTGTCTTCTGTTCACTCACT GTGATTGAAGTTGGGAAATTAAAATTTGAATCCCATCTGGGAATGTTTCATGTATATTTTTTTAGCAGAGTTTTAAATTG TGGTTGCAGTTGCCGATGCGGGGACTCCAAAACCCGTTATGTTGTGGCTGCAATTGTGGTTGCGGACCGCAATTTGAGAC CTTGATTGAGTATGTAATTTGAAATTCATTTTCTTTTGGAAAACATTAGCTTACTCAAGTGGTTTTTCAATTTTCCTATC CTGAACTTTGGCCTGAAAAGACTCCAGTCCAGATTTCATAGATGGCACTGACTGAGAGAGTATTTGCTTTTGTTTCTCAA ATACTTTTCATAGCAACCAAACAGTTAGTTATATGTTGATGTCACTGGCTGAGTTTCTGTTTTTCAGGGTCTTTAAAAAG AGGAGCAATAATCGCAGCAGTTTTAGCTGCAGCTGCAGTTATATTGCTGACTTTCTCTGTCTCTTATGCAGCCTTCACAA AATTGTCAAAGATAAAAAAAGGTGAACATTCTGGAAATGAAATTATCTTTATATAACAGCAAGAGAACTGTGAATCATTA GGTGTTAACTTTCTTATGCTGTATCAATTAGGAAACAAAAATCTTGATCAGATTTCCCCTTCCATGAGAAAATCTAGTTT TAACTACAAATACGAAACTCTTGAGAAGGCCACAGATTACTTCAACTCTTCAAGAAAAATAGGCCAAGGTGGAGCTGGTT CAGTTTTCAAAGGTGTTCTCCCGAATGGGAAAGTTGTTGCTGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGAT GAGTTCTTCAATGAAGTGAATTTGATTAGTGGAATTGAACACAAGAATCTTGTCAAACTATTGGGTTGTAGCATTGAAGG CCCTGAGAGCCTTCTCGTGTATGAGTACTTACCCAAAAAGAGTTTAGATCAATTTCTCTTTGGTAAGTTCTCTTTATCAT AGTACAATTTTAAAGTCAATTTCTTTGTTTCATAAGTGAGCTGTGAAAGAAGGGTAATATACATCATATAGTTTATGCAT AGTATCCGGAAGGTGACACATTAATCTGCTTAATTTGCAGAAAGGAAAAAAAATGAGATTCTAAACTGGAAGCAGCGGTT TAATATCATTCTTGGTACAGCAGAAGGGCTTTCATATCTTCATGAAGGTTATAAAATAAGAATCATTCATAGAGACATCA AAAGCAGCAACGTTCTTCTGGATGAGAATCTCATTCCTAAGATCGCAGATTTCGGCCTTGCGCGGTGTTTTGGTGCTGAT AAGTCACATTTAAGTACTGGAATTGCAGGAACACTGTAAGTCCTTCATTTTAGCATGCATGATATTGTGCATACGCATGT AACTACACATACATAATGAGTGTTAATTCCTGAAATATGTTAGTTCCTTTATAATATATTTGGATTAGTTTCTTTTTACT CAGAATCAATTGTTACACTCAGAAACAATTTCTATTTCTTTAACATGTAAACAATCTTGTTAACAATTCCTTTTTCTATT TTGGCAGAGGTTACATGGCTCCTGAGTACCTAACTAGAGGACAACTAACCGATAAAGCTGATGTCTATAGTTTTGGAGTA CTTCTTCTGGAGATTGTAGGTGGAAGGATGAATAATATCTTCAGAGAGGATTCTGGCTCTCTTCTACAAACTGTAAGAAT GTCTAAAACTTGAAACAGACCTCATTTTTATATTCAGTATTGATACTTGAACAAACAAACAGTGAAAACACCAACAGACA CCTCATTTTTCTCTCTATCTCTCTCTTCTTACATATATGATAACATCAACTACTCTCTCTTCTCTTCCTTTCTCACGCTG AGTGTTTGTTGGATGTCTACACTATGCAGATGTCTACACAACATTTTCCATATATTTTAGGCTACAAGAATTTTCAACAC CTTTTCTTGTAATTTACCAAGTGGAAAATTGTCCTTTTGGCATCAGGTTTGGAAACTTTACCAATCAAACACATTGATTG AGGCTGTTGATTCTTGCTTGGGAGATGATTTTCCTGCAACTGAAGCATCAAGGGTGATTCAAATTGGGTTGCTTTGTACA CAAGCTTCTGCTTCCATGAGGCCAACCATGACCCAAGTTGTCCACATGTTGAGTAATTCAAATATTGATGTCCCTGTACC AAATCAACCTCCATTTCTGAACACTGGAAATCTAGACTCAGACAGCTCCATAAAATCTTACAGCACAAACAGCTTTGTGT CCAATGCCTTAAAGAAGATTGGAGTGTCCCACAGTTACTCTGAGTCAGAATCCTCTGGTTCACACAACTCTTATGAGCCA TCAAGAAGTGAAGAAGCGATAATTCAAGCTTGATTTATATTATATTTCTTGGTTTTGGGGAGTTCATGTCCATATGTTGT GTATTAGCCAGAAAGGTTGAAAGATTAGAGTTAGAACTAATGAAGTCTTTTTTTATTATCCATACAAACAAATGTAAGAT AGTAGAAAGGAAAGAAGGTCGCTTGTTAAGGTTGAACACAAGTTCACTAAACTGTATAAAGATGAGAGAGCAGTAACATA TATACTTGTTTTCAATGTTACCATAATATTTTGGAAAAGCTTTTTGATGACCCTCCCGAGTGTTGCCCTCTAATAAATGT TAAACTTTAAGTATAAGTAAGAAATAAAAAATAAATAAAGAA
CDS sequence (LotjaGi1g1v0609600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCATGGCTTCTCTTATACACCATAGTTTTCTTCTTCTCATGGTGCTCATCACCCTCACTCTGTGACCCAAGAAT CTCAGAAGCAGGACTCTACTGCGGCACAACGAGAGCACCATTGAAAGCTAACTTCATCCCAAGCTTTATCAAAGAAATGG AGAATCTCTCTCAGCTGGTAACTGACCACAACTGGGGCACTCACTCCGTCAACATCTCCGGCAGCATCCCCATCTACGGC TTCGCGCAGTGCTTCCACGACCTCTCCCACACTGACTGCCTCCTCTGCTACGCCGCCAGCCGGACCAGGCTCCCCCGCTG CCTCCCTTCCCTCTCTGCTCGTATCTACCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGTTTCTACTCCGAGCGGA CTGACCCTGCCAGGGATGCGGTGAACTGCAGCTCGAGGCGCGGCGCGGCAGGTGGCGGAGTGGAGAGGTTGAGGCTGGAG AGGAGTGTAGGGAAGGTTCTTGATGGAGTGGCTGTGAAGGCTGTGGCCAAGGGTGGTGGTTTTGCGGTGGGAGGAGGTGA GGGTGTTTATGCATTGGCGCAGTGCTGGAAAACGGTTAGCAATGAGGGGTGTAGAGATTGCTTGAGGAAAGCTGTGAAGG AGGTTAGAGGGTGCTTGCCTAATAGGGAAGGGAGGGCATTGAATGCTGGGTGTTATTTGAGATACTCAACTGAGAAGTTC TATAATGAAAAAGGTGGAGAGTCTGATAGTCAACATGGGTCTTTAAAAAGAGGAGCAATAATCGCAGCAGTTTTAGCTGC AGCTGCAGTTATATTGCTGACTTTCTCTGTCTCTTATGCAGCCTTCACAAAATTGTCAAAGATAAAAAAAGGAAACAAAA ATCTTGATCAGATTTCCCCTTCCATGAGAAAATCTAGTTTTAACTACAAATACGAAACTCTTGAGAAGGCCACAGATTAC TTCAACTCTTCAAGAAAAATAGGCCAAGGTGGAGCTGGTTCAGTTTTCAAAGGTGTTCTCCCGAATGGGAAAGTTGTTGC TGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAATGAAGTGAATTTGATTAGTGGAATTGAAC ACAAGAATCTTGTCAAACTATTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTTCTCGTGTATGAGTACTTACCCAAAAAG AGTTTAGATCAATTTCTCTTTGAAAGGAAAAAAAATGAGATTCTAAACTGGAAGCAGCGGTTTAATATCATTCTTGGTAC AGCAGAAGGGCTTTCATATCTTCATGAAGGTTATAAAATAAGAATCATTCATAGAGACATCAAAAGCAGCAACGTTCTTC TGGATGAGAATCTCATTCCTAAGATCGCAGATTTCGGCCTTGCGCGGTGTTTTGGTGCTGATAAGTCACATTTAAGTACT GGAATTGCAGGAACACTAGGTTACATGGCTCCTGAGTACCTAACTAGAGGACAACTAACCGATAAAGCTGATGTCTATAG TTTTGGAGTACTTCTTCTGGAGATTGTAGGTGGAAGGATGAATAATATCTTCAGAGAGGATTCTGGCTCTCTTCTACAAA CTGTTTGGAAACTTTACCAATCAAACACATTGATTGAGGCTGTTGATTCTTGCTTGGGAGATGATTTTCCTGCAACTGAA GCATCAAGGGTGATTCAAATTGGGTTGCTTTGTACACAAGCTTCTGCTTCCATGAGGCCAACCATGACCCAAGTTGTCCA CATGTTGAGTAATTCAAATATTGATGTCCCTGTACCAAATCAACCTCCATTTCTGAACACTGGAAATCTAGACTCAGACA GCTCCATAAAATCTTACAGCACAAACAGCTTTGTGTCCAATGCCTTAAAGAAGATTGGAGTGTCCCACAGTTACTCTGAG TCAGAATCCTCTGGTTCACACAACTCTTATGAGCCATCAAGAAGTGAAGAAGCGATAATTCAAGCTTGA
Protein sequence (LotjaGi1g1v0609600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPWLLLYTIVFFFSWCSSPSLCDPRISEAGLYCGTTRAPLKANFIPSFIKEMENLSQLVTDHNWGTHSVNISGSIPIYG FAQCFHDLSHTDCLLCYAASRTRLPRCLPSLSARIYLDGCFLRYDNYSFYSERTDPARDAVNCSSRRGAAGGGVERLRLE RSVGKVLDGVAVKAVAKGGGFAVGGGEGVYALAQCWKTVSNEGCRDCLRKAVKEVRGCLPNREGRALNAGCYLRYSTEKF YNEKGGESDSQHGSLKRGAIIAAVLAAAAVILLTFSVSYAAFTKLSKIKKGNKNLDQISPSMRKSSFNYKYETLEKATDY FNSSRKIGQGGAGSVFKGVLPNGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKK SLDQFLFERKKNEILNWKQRFNIILGTAEGLSYLHEGYKIRIIHRDIKSSNVLLDENLIPKIADFGLARCFGADKSHLST GIAGTLGYMAPEYLTRGQLTDKADVYSFGVLLLEIVGGRMNNIFREDSGSLLQTVWKLYQSNTLIEAVDSCLGDDFPATE ASRVIQIGLLCTQASASMRPTMTQVVHMLSNSNIDVPVPNQPPFLNTGNLDSDSSIKSYSTNSFVSNALKKIGVSHSYSE SESSGSHNSYEPSRSEEAIIQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 258 | 235 | - | – | |
| ProSiteProfiles | 27 | 129 | 103 | 14.914 | ||
| Gene3D | 32 | 129 | 98 | 1.0E-13 | ||
| Pfam | 74 | 127 | 54 | 3.1E-10 | ||
| PANTHER | 101 | 614 | 514 | 4.1E-161 | – | |
| PANTHER | 101 | 614 | 514 | 4.1E-161 | – | |
| ProSiteProfiles | 141 | 240 | 100 | 15.059 | ||
| Gene3D | 155 | 240 | 86 | 1.3E-14 | ||
| Pfam | 177 | 237 | 61 | 3.2E-12 | ||
| Phobius | 259 | 282 | 24 | - | – | |
| TMHMM | 260 | 282 | 23 | - | – | |
| Gene3D | 281 | 396 | 116 | 7.8E-32 | – | |
| Phobius | 283 | 662 | 380 | - | – | |
| SUPERFAMILY | 304 | 618 | 315 | 2.16E-78 | ||
| ProSiteProfiles | 321 | 605 | 285 | 37.29 | ||
| SMART | 321 | 570 | 250 | 1.2E-30 | ||
| Pfam | 324 | 589 | 266 | 2.7E-45 | ||
| CDD | 327 | 589 | 263 | 3.70142E-94 | – | |
| Gene3D | 397 | 597 | 201 | 5.8E-61 | – | |
| ProSitePatterns | 442 | 454 | 13 | - | ||
| MobiDBLite | 636 | 662 | 27 | - | – | |
| MobiDBLite | 636 | 656 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0609600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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