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LotjaGi1g1v0675200.1

Overview

Field Value
Gene ID LotjaGi1g1v0675200
Transcript ID LotjaGi1g1v0675200.1
Lotus japonicus genome version Gifu v1.2
Description Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|A0A0B2P3G8|A0A0B2P3G8_GLYSO Signal recognition particle 54 kDa protein, chloroplastic; Found in the gene: LotjaGi1g1v0675200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:124231869..124240071) extracted from Lotus japonicus Gifu genome v1.2.

ATCATACCCTTTGGTGGGTTGGTTAGTGAAATTTAACAATTGTTAAAAGCACAGGGTAATGAAGTGTGATGCATGGCACT TAGATATTTCTGTTGGTCGTTGTGGATAATAGATAGATATTACGATAGATAGCACTTAACTACTCAGCAGCAGGTGAAGC TTCAACTTCATCTTCATCTTCATCAGCAGCAGAAGAAATGGAAGCTGTACTAGCATCTCGCCATTTCTCCACTCCTACCC ATTCTTCCTCTCACAACCGAACAGTGTGCTCTTCTTCTCCTTCTCCCAATTCACTCAAGCTTTCATCTCCTTGGACCAAC GCTTCCATTTCTTCCAGGAATTCATTCACGGTAAGCAAGTTTGTTTAACACAAGTTCAATGACAATTATAGCATGTTTGG ATCAACCTTGTTTTCCCTCATAATCAGAAGCTACTTATTCCCAAAATTGATTTTGGGTTGCAGAAAGAGATATGGGGCTG GGTGCAGGCAAAGAGCGTGGCCGTCAGAAGAAGAAGGGACATGCCCGGAGTGGTGAGGGCTGAGATGTTCGGACAGTTAA CCACTGGCCTTGAAGCTGCTTGGAACAAGCTCAAAGGAGAAGGTTTTTTTTCTAATTCCTCAAACATTATTACCAAAATC AACCCATTTGTAACAAATGGATTTTGTTTCTGCAGAGGTTTTGACCAAAGAGAATATTGTGGAGCCTATGAGAGATATTA GGAGAGCCCTTTTAGAAGCTGATGTAAGATTATCCTTATTTTAACAGATTTGGATTTTTTATTTTATATTTTATTTGTCT GTTAATGTAACAATATAACATAGTTAGCTAATATGCATGTTGTGTTGGCAGGTTAGCCTTCCTGTTGTGAGAAGGTTTGT GCAATCGGTCAGCGATCAGGCTGTAGGTGTTGGAGTGATTCGAGGTGTGAAACCAGATCAGCAATTGGTTAAGGTAAAAT CACACACTAAAGCTTTGCTTGCTACATAAAAGTTTACTGTTCTTGAGTTGCTATCAATTTTAAATCACCATTGGCAGATT CTAAGGCTCAATACTTCAATTCAACAGTCTTAAAGTTGCATTTAAATTCAACTGTTTCTGCTTACTACATACTAATGTTA TCATATTATTTGGGGTTGTCAAGCTGCATTTGAAATTTGAGGAGGGAAAGTGTCATTGCAACAACTAAATCTGGTTACAT TGTAGATAAGTGGACAAATCACCATATATGCAATGGATTGTTCTGGCTTTTCTTGATAAAAACTTTGTCTAATTCACTTG TAGTGTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGACCTTATAAACCCC ACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACATAGTGAAGGTGGGAGA AGTTGTTTGGATGAGATGTTTATCTCCTATTGTGATCATAGTATGATTATATTTATGATACTTCAACAAGAGCTATTTTT GGAGTACTGAAATTCTTTACAGAAATGTAATGGGTGTTGATCATTGGGTTTTGCAGATTGTACATGAAGAACTTGTAAAA TTGATGGGCGGAGAAGTCTCTGAACTGGCTTTTGCAAAGTCTGGGACCACTGTCATCTTATTGGCTGGACTCCAGGGAGT TGGGAAGACAACTGTTTGTGCTAAGCTGTCAAATTATCTAAAGAAACAGGTGTCTATCCAGTCTCCTTCCTACTTACTCC ATCTCCCTTCTGGTAGTTTTTAGTTCCTACACCTTATTGAAACGGAATAATCTGATTTCAGGGGAAGAGTTGCATGCTAG TCGCTGGGGATATTTACAGACCGGCTGCTATTGACCAGCTTACTATTTTGGGTAAACAGGTACTGATATTTTATGTCGCT GACATTGTTGATCATTTGTAATTTATTTAGTACTACACCTCCTTTAATTATAGTCAGCTATGTGATAGAAGAGTTATTGC ATCTTCAGTGTATTTAGCAATCTCTTGGGCTTTTAAAATGACTAGGAATCGAGAGAAATGTTGTGAACATTCTCATCTTT TAGCCAATTGAATTTAGACATCTAACAGCATCTACTTAAGATAATTTGACTAATTTCTTACCTTTTCTTCTCTCATTTTT AATTCTAGTCACATCTTTATAATTAGTTATAGCTTGTATCAGGTGGGTGTGCCTGTCTATACAGCAGGGACCGATGTTAA ACCTTCAGAAATTGCTAGACAAGGTTTAGAAGAGGCCAAAAAGAAGAAAATTGATGTGGTTATTGTTGACACTGCTGGTA GGCTGCAGGTAATTCTTTATAGGGTTGGAGGTGTTACGATGAATAATTATATCGTGATTTATTTATTTTTATTAGAATCA ATTTTATTCTTTTGGTCAAGTTTGCCATTTCTTGTGAAACAGATAGACAAAGCTATGATGGATGAGTTAAAAGAAGTTAA GAAGTCATTGAATCCAACAGAAGTCTTGCTAGTTGTGGATGCAATGACAGGGCAAGAAGCAGCAGGTATTCAGAAGAGAA TTTTTACTCTTTGCACAAAAAAGAAAGTATTTTTCTATAAAAATAGAATGAAAAACAAAACTGGTCATGTTTATGAACTG ACTGTAAATTAATTATTATCGTATTACTGATAAAAAAAATTCCCTTTTGGCTTTAGTGTAATTTTGTACTCGATGTAGAT TGTTATATCATGACAACTATAACCATTCAAAGATTCTGACTTTACTATTTTTGGTGAACAGCCTTGGTGACTACTTTCAA TCTTGAGATTGGAATAACAGGTGCCATATTGACAAAGCTAGATGGTGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAG AGGTTTGCTTGTCTTTATCACAGCTTTCATAAGATGTTTTATTTGGTATTTTATTTTGAAAAGTGCAGCTACTTTGAATT TGTTCTCATCTTAAGAAATGTGTACTATTCTACCCCATAATTTTTAACATTGCAAGTTCTTGAAACTTGAAAGTTAGTTT CATTCATTTACAAAACTGTGATTTGTAGGCACATTTTTTATAAAAGCTATTATTGTAAAGAACCTGTTTGGTAGCTTAAG CTTCATTAACTTCGATGTGATTTATCTTCAAAATAACATAAAACAAATTTTATGATATCCAGTCAAGTATTAAGTTAGTT CCTTGTATTCCAAACAACTTAACAGATTGACAATGAATATCTATTTATCTATCTATATATATATATATTATAAATATATA TTTTGGTACAGTTCTTGCTATAGTTTATTTTTATTTTTTGAAGTGTTAGGTTTTACCAATATTTTAAGCTTATTTGGAAT TGCAAAGTAATTGACTATGTAGTCCCCCATTTTGAAGCTCCCTCCTTCTTTCTCTCTTATATTTCATTTACATGGATAGT TCAATGATGGCAGGTATCTGGGAAGCCAATTAAGCTGGTAGGACGAGGGGAGCGTATGGATGATCTTGAACCTTTCTACC CTGATCGAATGGCAGGACGTATACTAGGAATGGGAGATGTTCTTTCATTTGTAGAGAAGGCACAAGAAGTTGTAAGTCTC ACTATGTTTTTTCTATTGTCATTGTCACAAAACCAAAGTAAAGTAATATGTTATTAACCACATTTATTATAGATGCAACA AGAAGATGCTGAAAAACTGCAAGAGAAGATCATGAGTGCAAAGTTTGACTTTAACGATTTTCTAAAGCAAACTCGTGCTG TTGCACAAATGGGTTCTGTGTCTCGTGTTATGGGAATGATTCCTGGTATGTCGAAGGTATGGGATCCTTCATGTAAACTC TCCTAAATATTTCAATTTATGACAATTTAATATGTGTTTCCCCATATGAATGGAGAACAAAGGCGGCACTTATATGATGA CAATCTCCCAGTTTTGGTGTATGAACCTCCAAACTAAGCACTGCTTGCATTTGCAAACTTTTCTTGATATTTGCAGTTTT AATTCTGTTAATGACGTAAAACTTATGGAATCTCATCTGATTGCGTACAGGTTACTCCTGCTCAAATTCGAGAAGCAGAG AAGAATTTGAAGAATATGGAAGCAATGATAGAAGCCATGACCCCAGGTCCTTTCTTTCTACTGATCAATGATGTCATATA TGTCAAATAAAAATTGCTCTATCATCTTCATATTTGTAATTTTGTTTATTAACATTGGTTTATCTCATGTAAATAAAAAA CTTAGCAATGATTGAGGCTACATGCGACATATGCTGATGACTTTTAATCCCCGGTCAAATTCTATCTCTCAATCCACCTC TCACATTTTCTAGTAGTTCAATTTTCCAGTTATACTTTTTATCTGTTTGAAACTCAGTTATTCGAAATTGTTTTGGGAAA ATTTCAACCCAATCGTTGCCTGTTTCCTGTGAGACATGAAGTTGATCCCTGAGAGATGGCTTTACCCTTTAGATATCACA GTTATGCAATCAATACTTTAACCACTCTCCCCTAGGCTTTTCATGTTCAATTGTTGTTTCCATGGAGATTTCAGCTTGAA TGTGACAGGTGATTTTCACATGTTTAGGCTTTGAAGGTGGTATTATTTGATATCATCTGCTTCTTTTTGTAATATCTTCA CTTTAGACATTTACCATATATCCTTTACATGGGTTTGCACAACGTGGATGAACAAACGGTCATTAGATAATTTTTTTCTA ACGAAATTGAAAGACACACTCAAGATTCCCTTGGTTACTACATGACGAGGATGCTAATTTTGTTGTGAGGAGAGCTTTGC GGTTTTACTTTTGATTTGTTGAACCTGAATTCACTGAATTTGCTAAACCAACTTTTCTTGTTATTCTCAGAGGAGAGGGA AAAACCAGAACTGTTGGCTGAATCCCCTGTCAGGAGGAAACGAGTTGCTCAGGAATCAGGGAAAACAGAGCAGCAGGTAT GCAGAATGATTTTTCTTTCAATTTTTTAAACATATTTTTTTGTCTAAGTAAACTAGCTCTTCTTTCTCTACCATTGCTAC TCTTTCTGACTTTGAAGAATGTATGACAACAATGTCAGGTAAGCCAAGTTGTAGCTCAACTATTCCAAATGCGTGTTCGA ATGAAGAATCTGATGGGTGTAATGCAAGGTGGATCAATGCCAACACTTAGTAATCTTGAAGAAGCACTTAAACCAGAGGA AAAGGTTATTTCATTTCCTACACATAAGAAATTTAACAATTTTCAAGTTACTTTCTTTTAATTTGGATTAACTAAGCATG TTTATTTTAAAAGGCTCCACCTGGCACTGCAAGGAGGAGAAAGAGATCAGAACAAAGGAGCCTATTTGCGGACTCAGCAG CAAGGCCAACTCCTCGTGGTTTTGGGAGCAAATAATGAAAATTTCTACAGGTGGTCGACACTCAACAATATGACGAAAAA GTTTTGATCAGCAGGTCATTTCTCATTAGTGGTCAATACTTTTGGTTTAGCTATAATTGCTTTCCGTCACTAGATCAGTT CATATAGCAATGAGCATTGTCTAGGAGTTTGTTGTAATTTTGGAAGAAATTAGTTATATTAGCGGGATGCACAAATTGAA GAAATCTGGGTGCCATTCTTTGTACAATTTCGAATTTGTATATGAGTATGGAATGGAAGTGTAATGTTACTTATAGAGAC CGTCCAGTATTTTTCATTTGGTTTTCTAACTCATTAGGTTCTTTTTGGCCATCAAGAGAAAATGCATGTTGTTGTGAAAA GATGGTTTAAGAATATACAGTGAAGATTACATTGCATGCAGAAATGTATTAGCGACTGGCTCATCGTGAATTCTCTGTTT TATGTTTGTAATTTTGTATATCATTTTGTGTACATCATTATGTTTGTCCAATGTTGTTAGGATCAGGATCCTACTCTGGA TCAGGGGTGAAATATCATAGATTGTATGACGGGATTGGATTGGATCGGATCATAAGATCCTACTAAAAATGCAATAATTT ACTAAACAATACTCATACATAGAAAATTACACTTAAACTGGAAAAAGGACTCAAACAGCCGCGTGTGATGGTCTACCACG GAGGTCGTGCACAAAGATAAACAAGAAAGATGGGAAGCGGTTGTGGAGGTCCGACAGATTGAGCCTCTATTAGGGGTTGG AACTCAGGAGCTCATTTCCAAGACTCTGGTCATGGGATTTGATTGTCTACCCCCAACAATTAGGATCCTAGTCCTAGATA AATCCTACTCTCATGAGATCCTATATGGGATCTTGATTGTAAAGTATCATAATTTCGAAATATCTCAATATTGAAGGATC CTAAGATCTGGATTTATATCCTGTGATAGGGATAGAATTAGGGAGAGAGGGAAGAACAGAGAGAATAGAGAGGGAAACAA GGGAAAAGGAGTATCATTATCATTAACAACATACCAATTACATAGTGTATACTACCTTATATAGCTAACTAGACTCCTAA CCCAAATGCATGTGTAACATATCCCTCCCCTTAAAATTTTCCTTGTCCTCAAGGAAACATACAAACAAATCCAAACAACT AAATGAACAACTAAATGAAACAAGACTCAAAAATTGAAACGGGCTCCAAAACTAGAAATAGAAAGCAAAAGTAGCAACAA TTTTCCTAGTAGCCTAATAGTCTTCTAAATCTAAACCTATGCATCTCTTGGCCTTTATTATTTTTTTTTGTTTCCTGCCA GACCCAACACCAGCAAGGCCCAACTCCTTCTTTGAACAACTTGGGCTTGGCCCACTCGAATGGGAGAGGGGGAGGGGTTC AGCAGGCACCCACTCTTTGGTGGCCTCTTCCCCTTCACTGTAACAGCCAGTATCGAACCTTTCACGCCTTCATCTCTCTT TCTTCCTCTGCCGTCCTTCGTTGAGTCTGGTGGCTTCGCCGGTGGCCGATTAGCCGTGACTAGCTGCCAAGATTCACCAG CATAGAAGCACGGATCTCTGCCACACATGAACATATCCGGCAGTTTTAGCGGCGGACGTGTGGCCATGACCGGAGCGCCA TCGCAAATAGACACGTCCGGCGGTTTCTGCGGTGGACGAACGTCCTTGACCAGCGGCTTGCAAGAATCAGCGGCCAAGAA GCAAAGGTCCTCACCGCAAAGGAAGAAATCTGGTGGCTGCCGTGGAGGTATTCTTCCTCCGCCAGACACAAATTCCTCAA CCTGAGACAAAACAACACCGCCGAGCCCAACGTCGCCGCCGTACTGAGGCGAATCGTCGCCGAGGAGCCTTGAATTACTC AACTGGAACCATTCGGTGACCCCTAGATCATCAATTTGGAAAAGATCGATCAAAACACAGAGGACCGGTCGCCAAGAATC TGCGACCAAGAAGCACAGTTCGCCGCTGCAAAAGAACGAATCTGGAGGCTTCCGTGGAGGCCTTCCTGCTCCATCAATGG CTGAATCACCACCATAATCACCTAGAACACCACCGCTGAGCACAGAGTTCCCAATTTTGGGCGAAACCGCAAACCTTAAA TCACTGATTTGGGGAAAAACGATTTCGAGCCCTAAATCACGAAATTAGGGTAGAACGGCATTGAATTGAGGAAGAACGAC GTTGATTTTGGGAAGAACGCAGGATTTGTTCAAGAACCCAAACGAAAACGCCTTTGAAGAACCGAAGAAGACGGTGACCG TCGCCGATTGTTCGTACTTCTCCGCTGCATCTTCTTCAGCCTCAGCCGCAGCACGCTCTCGTTCTGCTTCCACTTCTCGT TCTACCGCCGCTGCGTTTTCTTCTTCGGCCATGGCTACCGCCGCCGCTGCCGCTTTGGCTTCGTACCGCTCGTACGCCGC CATGTACTGCTCGTATTCGGCCACGTGGCGCTCATACGCCGCTGCCGCTTCTTCTCCCTGGCGAACTTCTTCACGTCGGC GAGCTGCTTCATGGGAACGCTTCAGGGATTCATCAAGCCTGTCGAGAGCTTTCCACCAATCTACATCCATTTTTTCCTTT TTTGATTTTCTGGTCTCAGGTGCACCGGATCGGTGCTCTGATACCAATGATAGGGATAGAATTAGGGAGAGAGGGAAGAA CAGAGAGAATAGAGAGGGAAACAAGGGAAAAGGAGTATCATTATCATTAACAACATACCAATTACATAGTGTATACTACC TTATATAGCTAACTAGACTCCTAACCCAAATGCATGTGTAACA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0675200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGCTGTACTAGCATCTCGCCATTTCTCCACTCCTACCCATTCTTCCTCTCACAACCGAACAGTGTGCTCTTCTTC TCCTTCTCCCAATTCACTCAAGCTTTCATCTCCTTGGACCAACGCTTCCATTTCTTCCAGGAATTCATTCACGAAAGAGA TATGGGGCTGGGTGCAGGCAAAGAGCGTGGCCGTCAGAAGAAGAAGGGACATGCCCGGAGTGGTGAGGGCTGAGATGTTC GGACAGTTAACCACTGGCCTTGAAGCTGCTTGGAACAAGCTCAAAGGAGAAGAGGTTTTGACCAAAGAGAATATTGTGGA GCCTATGAGAGATATTAGGAGAGCCCTTTTAGAAGCTGATGTTAGCCTTCCTGTTGTGAGAAGGTTTGTGCAATCGGTCA GCGATCAGGCTGTAGGTGTTGGAGTGATTCGAGGTGTGAAACCAGATCAGCAATTGGTTAAGATTGTACATGAAGAACTT GTAAAATTGATGGGCGGAGAAGTCTCTGAACTGGCTTTTGCAAAGTCTGGGACCACTGTCATCTTATTGGCTGGACTCCA GGGAGTTGGGAAGACAACTGTTTGTGCTAAGCTGTCAAATTATCTAAAGAAACAGGGGAAGAGTTGCATGCTAGTCGCTG GGGATATTTACAGACCGGCTGCTATTGACCAGCTTACTATTTTGGGTAAACAGGTGGGTGTGCCTGTCTATACAGCAGGG ACCGATGTTAAACCTTCAGAAATTGCTAGACAAGGTTTAGAAGAGGCCAAAAAGAAGAAAATTGATGTGGTTATTGTTGA CACTGCTGGTAGGCTGCAGATAGACAAAGCTATGATGGATGAGTTAAAAGAAGTTAAGAAGTCATTGAATCCAACAGAAG TCTTGCTAGTTGTGGATGCAATGACAGGGCAAGAAGCAGCAGCCTTGGTGACTACTTTCAATCTTGAGATTGGAATAACA GGTGCCATATTGACAAAGCTAGATGGTGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGTATCTGGGAAGCCAAT TAAGCTGGTAGGACGAGGGGAGCGTATGGATGATCTTGAACCTTTCTACCCTGATCGAATGGCAGGACGTATACTAGGAA TGGGAGATGTTCTTTCATTTGTAGAGAAGGCACAAGAAGTTATGCAACAAGAAGATGCTGAAAAACTGCAAGAGAAGATC ATGAGTGCAAAGTTTGACTTTAACGATTTTCTAAAGCAAACTCGTGCTGTTGCACAAATGGGTTCTGTGTCTCGTGTTAT GGGAATGATTCCTGGTATGTCGAAGGTTACTCCTGCTCAAATTCGAGAAGCAGAGAAGAATTTGAAGAATATGGAAGCAA TGATAGAAGCCATGACCCCAGAGGAGAGGGAAAAACCAGAACTGTTGGCTGAATCCCCTGTCAGGAGGAAACGAGTTGCT CAGGAATCAGGGAAAACAGAGCAGCAGGTAAGCCAAGTTGTAGCTCAACTATTCCAAATGCGTGTTCGAATGAAGAATCT GATGGGTGTAATGCAAGGTGGATCAATGCCAACACTTAGTAATCTTGAAGAAGCACTTAAACCAGAGGAAAAGGCTCCAC CTGGCACTGCAAGGAGGAGAAAGAGATCAGAACAAAGGAGCCTATTTGCGGACTCAGCAGCAAGGCCAACTCCTCGTGGT TTTGGGAGCAAATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0675200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEAVLASRHFSTPTHSSSHNRTVCSSSPSPNSLKLSSPWTNASISSRNSFTKEIWGWVQAKSVAVRRRRDMPGVVRAEMF GQLTTGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVKPDQQLVKIVHEEL VKLMGGEVSELAFAKSGTTVILLAGLQGVGKTTVCAKLSNYLKKQGKSCMLVAGDIYRPAAIDQLTILGKQVGVPVYTAG TDVKPSEIARQGLEEAKKKKIDVVIVDTAGRLQIDKAMMDELKEVKKSLNPTEVLLVVDAMTGQEAAALVTTFNLEIGIT GAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEKLQEKI MSAKFDFNDFLKQTRAVAQMGSVSRVMGMIPGMSKVTPAQIREAEKNLKNMEAMIEAMTPEEREKPELLAESPVRRKRVA QESGKTEQQVSQVVAQLFQMRVRMKNLMGVMQGGSMPTLSNLEEALKPEEKAPPGTARRRKRSEQRSLFADSAARPTPRG FGSK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 39 39 - –
MobiDBLite
mobidb-lite
9 39 31 - –
PANTHER
PTHR11564:SF30
58 546 489 4.1E-274 –
PANTHER
PTHR11564
58 546 489 4.1E-274
IPR022941
SMART
SM00963
79 164 86 6.3E-29
IPR013822
TIGRFAM
TIGR00959
81 505 425 1.5E-167
IPR004780
Gene3D
G3DSA:1.20.120.140
82 383 302 1.7E-125
IPR042101
Pfam
PF02881
83 160 78 2.0E-18
IPR013822
Hamap
MF_00306
83 520 438 32.412
IPR022941
SUPERFAMILY
SSF52540
120 431 312 3.86E-56
IPR027417
Gene3D
G3DSA:3.40.50.300
168 362 195 1.7E-125 –
SMART
SM00382
177 324 148 1.8E-10
IPR003593
SMART
SM00962
178 373 196 4.3E-108
IPR000897
CDD
cd18539
179 371 193 1.10232E-120 –
Pfam
PF00448
179 373 195 8.4E-77
IPR000897
ProSitePatterns
PS00300
346 359 14 -
IPR000897
Gene3D
G3DSA:1.10.260.30
387 518 132 2.1E-34
IPR036891
Pfam
PF02978
404 502 99 2.8E-24
IPR004125
SUPERFAMILY
SSF47446
404 505 102 6.7E-27
IPR036891
Coils
Coil
441 461 21 - –
MobiDBLite
mobidb-lite
461 483 23 - –
MobiDBLite
mobidb-lite
461 491 31 - –
MobiDBLite
mobidb-lite
517 564 48 - –
MobiDBLite
mobidb-lite
524 548 25 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of
GO:0006614
Biological process SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
Subterm of
GO:0008312
Molecular function 7S RNA binding Interacting selectively and non-covalently with 7S RNA, the RNA component of the signal recognition particle (SRP).
Subterm of
GO:0048500
Cellular component Signal recognition particle A complex of protein and RNA which facilitates translocation of proteins across membranes.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0675200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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