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SSF47446

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006614
Biological process SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
Subterm of
GO:0008312
Molecular function 7S RNA binding Interacting selectively and non-covalently with 7S RNA, the RNA component of the signal recognition particle (SRP).
Subterm of
GO:0048500
Cellular component Signal recognition particle A complex of protein and RNA which facilitates translocation of proteins across membranes.
Subterm of

Associated Lotus transcripts 24

Transcript Name Description Predicted domains Domain count
Lj0g3v0310459.1
– PREDICTED: signal recognition particle 54 kDa protein, chloroplastic-like [Cicer arietinum] gi|502111902|ref|XP_004494200.1|
Domains
14
Lj1g3v4717440.1
– Signal recognition particle 54 kDa protein [Medicago truncatula] gi|357511109|ref|XP_003625843.1|
Domains
25
Lj1g3v4717440.2
– Signal recognition particle 54 kDa protein [Medicago truncatula] gi|357511109|ref|XP_003625843.1|
Domains
13
Lj3g3v0044270.1
– Signal recognition particle, SRP54 subunit protein [Theobroma cacao] gi|508778637|gb|EOY25893.1|
Domains
24
Lj3g3v2185880.1
– PREDICTED: signal recognition particle 54 kDa protein 2-like [Cicer arietinum] gi|502147886|ref|XP_004506954.1|
Domains
13
Lj4g3v0510210.1
– Signal recognition particle, SRP54 subunit protein [Theobroma cacao] gi|508778637|gb|EOY25893.1|
Domains
24
LotjaGi1g1v0674900_LC.1
– Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|G7KQW9|G7KQW9_MEDTR Signal recognition particle 54 kDa protein; Found in the gene: LotjaGi1g1v0674900_LC
Domains
22
LotjaGi1g1v0674900_LC.2
– Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|G7KQW9|G7KQW9_MEDTR Signal recognition particle 54 kDa protein; Found in the gene: LotjaGi1g1v0674900_LC
Domains
22
LotjaGi1g1v0674900_LC.3
– Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|G7KQW9|G7KQW9_MEDTR Signal recognition particle 54 kDa protein; Found in the gene: LotjaGi1g1v0674900_LC
Domains
22
LotjaGi1g1v0674900_LC.4
– Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|G7KQW9|G7KQW9_MEDTR Signal recognition particle 54 kDa protein; Found in the gene: LotjaGi1g1v0674900_LC
Domains
22
LotjaGi1g1v0674900_LC.5
– Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|G7KQW9|G7KQW9_MEDTR Signal recognition particle 54 kDa protein; Found in the gene: LotjaGi1g1v0674900_LC
Domains
22
LotjaGi1g1v0675200.1
– Signal recognition particle 54 kDa protein; TAIR: AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit; Swiss-Prot: sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic; TrEMBL-Plants: tr|A0A0B2P3G8|A0A0B2P3G8_GLYSO Signal recognition particle 54 kDa protein, chloroplastic; Found in the gene: LotjaGi1g1v0675200
Domains
28
LotjaGi3g1v0007800.1
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi3g1v0007800
Domains
27
LotjaGi3g1v0007800.2
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.3
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.4
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.5
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.6
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi3g1v0007800
Domains
27
LotjaGi3g1v0007800.7
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0355000.1
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A0D2UQY3|A0A0D2UQY3_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
27
LotjaGi3g1v0355000.2
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|I1KVG2|I1KVG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
28
LotjaGi3g1v0355000.3
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|I1KVG2|I1KVG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
28
LotjaGi3g1v0355000.4
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A0D2UQY3|A0A0D2UQY3_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
27
LotjaGi4g1v0068100.1
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi4g1v0068100
Domains
28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd17875 CDD 1 4.17