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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0678700 |
| Transcript ID | LotjaGi1g1v0678700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pleiotropic drug resistance ABC transporter; TAIR: AT1G66950.1 pleiotropic drug resistance 11; Swiss-Prot: sp|Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2; TrEMBL-Plants: tr|K7MZ72|K7MZ72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0678700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124510851..124514237) extracted from Lotus japonicus Gifu genome v1.2.
TTGTTGTTTATGTATCATTATTATTTGTTACTAAAGTTGTAATTTTTTTTTTTCATTTGTTATGGTGAAGGGTGGGGATT GAAATTCCAAAAATTGAAGTCCGGTTTGAGAATTTATCTGCAGATGGAGATGTCTATGTTGGGAGCAGAGCTCTTCCTAC TCTGCTTAATGTTACTTTAAACGCTTTTGAGGTAATATTCAAAGTGTTTTCTGAAACCAGAATGTTTTGTAGAGCTTCTA ATTTGGGGTCTAAAATCATATTTGTACCAAAGAAAAATGAAATGAAAAGAGATTTAGAAAGAAAAAAGAACTGTATTTAA AAATTGAAATTGTTTCTTTCACTGTATTTCTGATTTGAGAGAACTATTACTACTATTAGTCTAGTTTGGTACTAATGTTT TTTTCTGATTTGTTTGTTTGCGTGGTAGAGTGTTCTGGGGTTGTTTCACCTTGCACCGTCCAGGAAGAGGGAGATTCAGA TTCTCAAAGATGTTAGCGGAATAATCAAACCTTCAAGGTAAGAGTATCACACATTTCAGAAGAATAGGTTAACAATTTGT TAAGAATTGTAATTGAGTGAAACTGAAATTGTATTTAACTGAATTGAGGTGAGTGCATTTCATACAAGTTTATTTTTCAC AGAATACAGTTACAAAGATGGATGAATCTTTGCTTTTTCTGTATTTATGACTTTTTCTCTGGAAAGTCAAGTAATGCCAA AATGAAAAAGGGCAAAATATTTGTACCATTGTAAACGTGGAAGAAAATATTGATATGGATTGATACATTCTTTCATTTGT TTGACCATTTTATAATTTTTTTTGGCACTGAAGGCTGAAGCCTGTATTTATTGTATTTGGTGTGGTAATCTCAGGATGAC TCTCCTTCTGGGTCCTCCAGGTTCTGGGAAAACAACATTGCTTCTGGCACTTTCAGGAAAACTTGATCCTAGTTTGAGGG TTTGTTCCCTTTTCTGTATCTATTTTTCTTAGTTTACAATCAGATAACTAGTAATTTCTTTTTTCACTACTAATTAGGCT TTTGGTGTGAACAGGTCTCTGGGAAAGTTACTTACTGTGGACATGAGATGAATGAATTTGTGGCTCGGAAAACCTGTACC TATATTAGTCAACATGACATTCACTCTGGAGAAATGACTGTGAGAGAGACATTAGATTTTTCGACGCGGTGTCTAGGGGT TGGCACAAGGTATGAAATGTTGACAGAACTATCAAGAAGGGAGAGAGAAGCAGGAATTAAGCCAGACCCTGAAATTGATG CATTCATGAAAGCTATAGCATTGTCAGGCCAAAGATCCAGTTTGGTAACTGATTATGCTCTCAAGGTTTGTGTCTCTTTT GTTTTAACTTCAACTTATTAGTATAATACTTCTTTTATTTACTTTTTTAGTAAGCGGATTTGTAGTATGTTCTAATAGGT ACTTGGGTTGGATATATGTGCTGATGTAATGATTGGTGATGAAATGAGAAGGGGTATCTCTGGTGGACAGAAGAAGAGAG TAACAACAGGTTAATTTCTTCTTTATTTGATGCTTAACCAACAAATTGAAGTTATTACACATTTAATCTGTACTAACTCC TTCAGTTGTAACTGGGTCTAGGTGAGATGCTGGTAGGACCTGCGAAGGCACTCTTCATGGATGAAATATCAACAGGATTG GACAGTTCCACCACCTTCCAGATATGCAAGTTCATGAGACAAATGGTTCATATCATGGATGTAACCATGGTGATTTCTCT TTTACAGCCAGCACCAGAGACATTTGAACTCTTCGACGACATTATCCTGCTTTCAGAAGGTCAAATTGTATACCAAGGTC CACGAGAGAACGTGCTAGAGTTTTTTGAGTACATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGCTGCTGACTTTCTACAA GAAGTAACATCCAAGAAAGACCAGGAACAATATTGGTTTAGAAAAGATGAGCCTTATAGATATGTTTCAGTTCCTGAATT TGTACAGTCCTTTCATTCGTTTCACATTGGAGAGCAACTTGTGACAGAGCTTGGAGTTCCCTATGATAAGAGCCAAACAC ACCCAGCTGCATTAGTTAAAGACAAGTACGGTATATCAAACTGGGAACTATTTAAGGCATGCTTTTCAAGAGAGTTGCTG CTTATGAAGCGTAGTTCTTTTGTTTATATATTCAAAACAACACAGGTTACAATCATGTCTATCATTACTTTAACTGTGTT CTTTAGAACAAAAATGACACCGGGAACTGTTCAAGGCGGACAAAAGTTTTATGGAGCATTGTTCTTTACTCTAATAAATA TGATGTTTAATGGGATGGCAGAACTAGCCATGACTGTTTTTAGGCTTCCTGTCTTCTACAAACAAAGGGATTTCATGTTC TACCCTGCGTGGGCATTTGGGCTACCTATATGGATTCTAAGGATTCCTCTCTCCCTTGTGGAATCAGGGATATGGATTGT CCTTACATATTATACAATTGGGTATGCTCCTTCTGCAAGCAGGTAATGTGGAAAGAAGCTTAATTTTGTTCTTTTTTTGC TTTAGTAGTATTTAGAGACAAGAATGATAACAGTTTCTTGTCCTTCTATATATCATCAGATTTTTCCGACAATTCTTGGC ATTATTTGGCATTCATCAGATGGCTCTCTCTCTCTTTCGGTTCATTGCTGCAGCTGGCAGAACACTAGTGGTTGCTAATT CAGTGGGTACCTTGTCATTGCAAGTGGTATTTGTGCTAGGAGGTTTTATTGTTGCCAAAGGCAAGTCATTTATAACCTCT TAATTTTGCATACACCTTTTAGCTTCACAAAGCTTAATAAGATTAAACATGTTAGTTTTTCTTCCTCTTATTTACAGTCG TATTCTATAGTTCCGAACAACTACTTAGTGCAACATATTTTCTTATGTCCTTGTAGATGCAATTGAGCCATGGATGATAT GGGGCTACTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATGAATGAATTCTTAGATAAAAGATGGAGTGAA GTAAGAAATCAATTATCTTATTCTTGTTTGTTACTCCTATCTTACTCACAAACAACCAAGACAAATTTGTATCTAGTGTT AGTTACTTCTATGATATGAACTTTAAACATTGTTAAATATCCTTTTTATCTTTTGCAGCCAAATACAGACTCTAGAATTG ATGCACCTACAATTGGAAAAGTACTTCTCAAATCTAGAGGCTTATATACAGAAGACTATTGGTATTGGATCTGCATTGGA GCCTTGTTTGGGTTTGCTCTTCTTTTTAACCTTTTGTTCATTGCTGCATTGACTTATCTGAATCGTAAGTTATATTCTTT TGATTCTCAAAGTCCCTAATCAAATAA
CDS sequence (LotjaGi1g1v0678700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGGGATTGAAATTCCAAAAATTGAAGTCCGGTTTGAGAATTTATCTGCAGATGGAGATGTCTATGTTGGGAGCAG AGCTCTTCCTACTCTGCTTAATGTTACTTTAAACGCTTTTGAGAGTGTTCTGGGGTTGTTTCACCTTGCACCGTCCAGGA AGAGGGAGATTCAGATTCTCAAAGATGTTAGCGGAATAATCAAACCTTCAAGGATGACTCTCCTTCTGGGTCCTCCAGGT TCTGGGAAAACAACATTGCTTCTGGCACTTTCAGGAAAACTTGATCCTAGTTTGAGGGTCTCTGGGAAAGTTACTTACTG TGGACATGAGATGAATGAATTTGTGGCTCGGAAAACCTGTACCTATATTAGTCAACATGACATTCACTCTGGAGAAATGA CTGTGAGAGAGACATTAGATTTTTCGACGCGGTGTCTAGGGGTTGGCACAAGGTATGAAATGTTGACAGAACTATCAAGA AGGGAGAGAGAAGCAGGAATTAAGCCAGACCCTGAAATTGATGCATTCATGAAAGCTATAGCATTGTCAGGCCAAAGATC CAGTTTGGTAACTGATTATGCTCTCAAGGTACTTGGGTTGGATATATGTGCTGATGTAATGATTGGTGATGAAATGAGAA GGGGTATCTCTGGTGGACAGAAGAAGAGAGTAACAACAGGTGAGATGCTGGTAGGACCTGCGAAGGCACTCTTCATGGAT GAAATATCAACAGGATTGGACAGTTCCACCACCTTCCAGATATGCAAGTTCATGAGACAAATGGTTCATATCATGGATGT AACCATGGTGATTTCTCTTTTACAGCCAGCACCAGAGACATTTGAACTCTTCGACGACATTATCCTGCTTTCAGAAGGTC AAATTGTATACCAAGGTCCACGAGAGAACGTGCTAGAGTTTTTTGAGTACATGGGTTTCAAGTGTCCTGAAAGAAAAGGA GCTGCTGACTTTCTACAAGAAGTAACATCCAAGAAAGACCAGGAACAATATTGGTTTAGAAAAGATGAGCCTTATAGATA TGTTTCAGTTCCTGAATTTGTACAGTCCTTTCATTCGTTTCACATTGGAGAGCAACTTGTGACAGAGCTTGGAGTTCCCT ATGATAAGAGCCAAACACACCCAGCTGCATTAGTTAAAGACAAGTACGGTATATCAAACTGGGAACTATTTAAGGCATGC TTTTCAAGAGAGTTGCTGCTTATGAAGCGTAGTTCTTTTGTTTATATATTCAAAACAACACAGGTTACAATCATGTCTAT CATTACTTTAACTGTGTTCTTTAGAACAAAAATGACACCGGGAACTGTTCAAGGCGGACAAAAGTTTTATGGAGCATTGT TCTTTACTCTAATAAATATGATGTTTAATGGGATGGCAGAACTAGCCATGACTGTTTTTAGGCTTCCTGTCTTCTACAAA CAAAGGGATTTCATGTTCTACCCTGCGTGGGCATTTGGGCTACCTATATGGATTCTAAGGATTCCTCTCTCCCTTGTGGA ATCAGGGATATGGATTGTCCTTACATATTATACAATTGGGTATGCTCCTTCTGCAAGCAGATTTTTCCGACAATTCTTGG CATTATTTGGCATTCATCAGATGGCTCTCTCTCTCTTTCGGTTCATTGCTGCAGCTGGCAGAACACTAGTGGTTGCTAAT TCAGTGGGTACCTTGTCATTGCAAGTGGTATTTGTGCTAGGAGGTTTTATTGTTGCCAAAGATGCAATTGAGCCATGGAT GATATGGGGCTACTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATGAATGAATTCTTAGATAAAAGATGGA GTGAACCAAATACAGACTCTAGAATTGATGCACCTACAATTGGAAAAGTACTTCTCAAATCTAGAGGCTTATATACAGAA GACTATTGGTATTGGATCTGCATTGGAGCCTTGTTTGGGTTTGCTCTTCTTTTTAACCTTTTGTTCATTGCTGCATTGAC TTATCTGAATCGTAAGTTATATTCTTTTGATTCTCAAAGTCCCTAA
Protein sequence (LotjaGi1g1v0678700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGIEIPKIEVRFENLSADGDVYVGSRALPTLLNVTLNAFESVLGLFHLAPSRKREIQILKDVSGIIKPSRMTLLLGPPG SGKTTLLLALSGKLDPSLRVSGKVTYCGHEMNEFVARKTCTYISQHDIHSGEMTVRETLDFSTRCLGVGTRYEMLTELSR REREAGIKPDPEIDAFMKAIALSGQRSSLVTDYALKVLGLDICADVMIGDEMRRGISGGQKKRVTTGEMLVGPAKALFMD EISTGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEYMGFKCPERKG AADFLQEVTSKKDQEQYWFRKDEPYRYVSVPEFVQSFHSFHIGEQLVTELGVPYDKSQTHPAALVKDKYGISNWELFKAC FSRELLLMKRSSFVYIFKTTQVTIMSIITLTVFFRTKMTPGTVQGGQKFYGALFFTLINMMFNGMAELAMTVFRLPVFYK QRDFMFYPAWAFGLPIWILRIPLSLVESGIWIVLTYYTIGYAPSASRFFRQFLALFGIHQMALSLFRFIAAAGRTLVVAN SVGTLSLQVVFVLGGFIVAKDAIEPWMIWGYYISPIMYGQNAIAMNEFLDKRWSEPNTDSRIDAPTIGKVLLKSRGLYTE DYWYWICIGALFGFALLFNLLFIAALTYLNRKLYSFDSQSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 412 | 412 | - | – | |
| Pfam | 2 | 35 | 34 | 4.9E-6 | ||
| ProSiteProfiles | 44 | 317 | 274 | 14.326 | ||
| Gene3D | 47 | 350 | 304 | 7.3E-48 | – | |
| CDD | 49 | 299 | 251 | 6.13195E-73 | ||
| SUPERFAMILY | 55 | 317 | 263 | 4.49E-34 | ||
| Pfam | 60 | 242 | 183 | 2.1E-16 | ||
| SMART | 69 | 294 | 226 | 1.5E-8 | ||
| PANTHER | 97 | 675 | 579 | 0.0 | – | |
| PANTHER | 97 | 675 | 579 | 0.0 | – | |
| Pfam | 396 | 608 | 213 | 8.2E-40 | ||
| TMHMM | 412 | 434 | 23 | - | – | |
| Phobius | 413 | 434 | 22 | - | – | |
| Phobius | 435 | 448 | 14 | - | – | |
| Phobius | 449 | 472 | 24 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| Phobius | 473 | 483 | 11 | - | – | |
| Phobius | 484 | 503 | 20 | - | – | |
| TMHMM | 497 | 519 | 23 | - | – | |
| Phobius | 504 | 508 | 5 | - | – | |
| Phobius | 509 | 525 | 17 | - | – | |
| Phobius | 526 | 531 | 6 | - | – | |
| Phobius | 532 | 550 | 19 | - | – | |
| TMHMM | 532 | 551 | 20 | - | – | |
| Phobius | 551 | 555 | 5 | - | – | |
| Phobius | 556 | 579 | 24 | - | – | |
| TMHMM | 556 | 578 | 23 | - | – | |
| Phobius | 580 | 585 | 6 | - | – | |
| TMHMM | 585 | 604 | 20 | - | – | |
| Phobius | 586 | 604 | 19 | - | – | |
| Phobius | 605 | 641 | 37 | - | – | |
| Pfam | 613 | 670 | 58 | 4.4E-24 | ||
| Phobius | 642 | 669 | 28 | - | – | |
| TMHMM | 642 | 664 | 23 | - | – | |
| Phobius | 670 | 681 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi1g1v0678700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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