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LotjaGi1g1v0794600.2

Overview

Field Value
Gene ID LotjaGi1g1v0794600
Transcript ID LotjaGi1g1v0794600.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Bifunctional fucokinase/fucose pyrophosphorylase; TAIR: AT1G01220.1 L-fucokinase/GDP-L-fucose pyrophosphorylase; Swiss-Prot: sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase; TrEMBL-Plants: tr|G7L443|G7L443_MEDTR L-fucokinase/GDP-L-fucose pyrophosphorylase; Found in the gene: LotjaGi1g1v0794600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136570389..136575888) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGGTACCATCTCAGGTTATCTGTCCG TCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGATCAAGCTCACCTCTACACCTGGC AGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCGTCCCCGACCCTCTTGGTTGCCGC ATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGCCCTCGCTCTCCATTACCACACCACCACCCAGGTACCCTTCAT TTCCTATTTCTCAGATTTCAACTAACTCAAAAAGGAATTTCAAATCTATAATCATTTATCACTGTTTTTTACTTACAGGT GTCAACTACCAATGGCACTGATGATTCTCTTCTTCTCCCAATGGCTACCTTGCTGGCCAATAAGCATATACTATTGCTCC ATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTCTTCCTCTTCCCTACTTGGCATCA GATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATACTTGCCATTGCTTCTTGTGCAAGACAAGCTTTTGGGGA TCAAGGTTGTTTTCTTCATATATGCATTCATTCAAGTTAAATTTTATTGTTTGTTCTAGCCCTTTTCCCTGTCCTTTGTA TATGACAGAACATAACTTCAAGTGTTTTAAATATCAAATTTTCAAACTTGTCCTGTATTTTATCCCCTTTCCATATGTTA GGGAATTCTGTATATGGATATATATTCATTATTCAATATGGCATTAGTGATAAAAATTTAATTTAACCAAACACTTAACA ACATTATCATTGTTCTTTCTCAATGGGATTTATTTGCTGTCTTTTTCTCTGGGGTTACCTGCTGCTGATGTTTGCATAAA AATTCATTCAATCCTCTCACAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCATGTTTTGACGCCTCTGTGATGAT TCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAAACCATGGAGTTATTGTTGCAG CTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCCAGAAACCTACTTTAGAAGAGCTA GTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGCAGTTAGAGGTAAGGCATGGTT GGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCAAAAAGGAGGTACACTACATTG TTTGGTTTTTATGGGTGGAAAAGAAACGAAATGAAAGTATTAAATAATTAAATTCGTTGTTATGCTTTTGTATATAGGGA ATGAGAACAAATTGCTAAAACCAAGTTTATTTGATTGAAGTCAAGATTGTCATTTAATATATAAAATAGATATATATTTT GATATTCTATGCAGGACTTAAAATATGGTGCAGCAGCTTCCATCCAAATCTGTCCACTTATAGACAAAATGGACTTTTTT TGGGGGAGGGGTGTTTCATTTCATCACTTTATAAAGTAACATACGGAGAAAGATAGGTTGCTTTACGGTCATTGCACACA ATTCCATTCAACCATACAAATCATGAATTTTATATGTTATGAGTGCCATGCCAGTAATATCTTTGACGAGCTTACTTTGA GTGCTCTTATAAGCCATGTTTAGTAAAACATCTTTGTAAAATACACAAATGAACTGATATCATGAGACCTCTATTCATCG TTTTAAGTAACAACTAATGGTAACATTGCCTCAGTTAGGTCCTACTGCAGCTACTTTGGTTGACCTTGCATGTAATAAAA GATCACTTTTCTGATTTAAGGAAACTTTATATATTTTGGTGTGTGCCCATGCTGATATTTTTGTTATCCCACTTTTCCTT CTTTCTAACTTGATTACTATTCATGTTGTTAAGTTTTCTTCAATTTGAGTGTAAATTTCAATTAACAAAAGAATTTTTGT TATATAAATACCTACAAAGTCTGCCCATGTAAATAGCTACCAAAGCACGAAATGCTCTTGTTTGTTTGAAGAACAATGAA AGTATTTTATCTAAGAATAAATGCTTTGTGCTGTGCAGATGAGTTTATATGAAGATCTGGTTGCTGCCTGGGTACCTGCA AAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAATAAATTGGGAAAGCATAAGATGTTCAGCTACTG TGCCTGTATGTCAAGCTCAATTGCAATCTTCTCTCTGTATCTGCAATTCTGCACAGTCCTCTATCTATCTGTACAAACAT TGATTCTCTCATATATTATGCCATTGCAGATGATTTGTTGTTCTTGCATTTTGGGACCTCAAGTGAAGTACTAGATCACC TCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAGCTACCACTGCATCTGACATTACAGCA TCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATTCTCTCATATATGATTCGTCTATTTC TGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGATGACTATATATGCACTGAAGATT CAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAAGTAGTGAGCGAGTTCTTGTATAT TCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGGAAACCCTGGAAGAAAGTTTTGAA TGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTGTTTATGGAATTCAAGAATCTTCC CCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTAAACATAAAAGTGAATACTTTTCT TTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACAATGTGCATAGGTTCACG TAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGGAATGCTGGGGCGCAATTTGTCTCAAC TATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCCTAGCTATGTGTCCAAAAGTTCAG GAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTTCTTCGAGCTTGCAATGACGAAGC GACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGTAAGATATGGCTTTAAAG GTACATGCTTTAATCATGGTCATGCCCCAAGATGCCATCTTCATGAAAAAACAAATTGCAAACAGTTCAGTGCTGCTGGC ATTTTTTTTTAAGGTGTGGTGGTGACTATTGAAAGAATTAACTTTAAGGTTGAGCGATTGAAAACCAAAGTTTTCTGTGA AGATAAATTATTGAGATATTATAGCATCTCTATGTGATTGATGGTGGGTAGTATTAGTTTCTCATAGTATTATCTCTCTA TAATCAACTCTCAAAATACAGACTTAGAAAAAGAGTTATCTATGATTAACGATTAACGCCATTTAGAATTCATTTGACCT CAAGAGTAGTTACAACTAGCTATCTAAGTGTTTTGTTTTTAAATCTTACATATCACATTCTCCATTCCTATATTTGAAGG AATGGACAATTGCTTCTAAATATTCATGTAAAAAATTAGAGAACTGATTTTCTTATAGCTGAATTCGTTCTCTTTCTGTA GAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACCGTCATGATGGGCGCACTCGTCAACC TCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTGGAGTGATACCCCTCCATGGA GCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAATTGGCACCATCATAGAGACG GCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAAGATTATAAATCTATATGTACACC ATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGCATTATTCATGATAACATCCTTGCAG ATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTACTTCTAGTATTTTAGCTGCAGCT GTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTGCGAGACTTGTTTTGGTGTTAGAACA ACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAAATGTACTTCAAGCTTTCCTG GAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTGAATTGCAGCAACGGCTTCTTGTG GTATTTACCGGTCAAGTAAGTATTTGTTTGTTCATATGAAAATGCATTTTGCGTTCCTCCATGCACCACCAATTATTGCC TAAAAGCTTGTAGTGTACGCTTTGGATCAACATTATTTTTCCTCATAATCAATTTTACACCGCCACGCACCAAAGTTTCT CCTCATAATTGAATTTGGCTTTAGAATCAACTGTAGAAATATTTCCAAATATGCACAAGGACAGGAATTAAAGCTCCTGG GGAAAAGCTTCAATATTGGACAAATCGCAAATTAGCAATAGTTTCCAGATTAAAATTTCAGGAGATATGTTGTTCACGTT TTGTTTTGAATTTTTGTTTCTTTTTTAACATATATAATTACACATCTTATTTAATGTTGTCATTTTGAAGCTAGTGCGGC CATTCACTAAATTCAACATCCTATATTACTAACTTTGATTTTGGATTTACATGGAAATGTTTTGCAGGTTCGGCTTGCAA AGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGGATAATCTTTTGGTATCAAGTATCAAGCGCCTTGTTGAG CTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGATGAATTTGGGGAGATAATGTTGGAAGCTTGGAGATT GCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACAGGCTATTTTCTTTTGCTAGTCCCTACTGCTGTGGTT ACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTACTTGCCAGAGACAAACAGCGAGCCAAGGAACTCAGACAG AGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGATTGGCATATATCTCTATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0794600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGGTACCATCTCAGGTTATCTGTCCG TCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGATCAAGCTCACCTCTACACCTGGC AGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCGTCCCCGACCCTCTTGGTTGCCGC ATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGCCCTCGCTCTCCATTACCACACCACCACCCAGACCTTGCTGGC CAATAAGCATATACTATTGCTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTC TTCCTCTTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATACTTGCCATTGCTTCT TGTGCAAGACAAGCTTTTGGGGATCAAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCATGTTTTGACGCCTCTGT GATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAAACCATGGAGTTATTG TTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCCAGAAACCTACTTTAGAA GAGCTAGTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGCAGTTAGAGGTAAGGC ATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCAAAAAGGAGATGAGTT TATATGAAGATCTGGTTGCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTT AATAAATTGGGAAAGCATAAGATGTTCAGCTACTGTGCCTATGATTTGTTGTTCTTGCATTTTGGGACCTCAAGTGAAGT ACTAGATCACCTCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAGCTACCACTGCATCTG ACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATTCTCTCATATATGAT TCGTCTATTTCTGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGATGACTATATATG CACTGAAGATTCAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAAGTAGTGAGCGAG TTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGGAAACCCTGGAAG AAAGTTTTGAATGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTGTTTATGGAATTC AAGAATCTTCCCCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTAAACATAAAAGTG AATACTTTTCTTTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACAATGTGC ATAGGTTCACGTAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGGAATGCTGGGGCGCAA TTTGTCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCCTAGCTATGTGTC CAAAAGTTCAGGAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTTCTTCGAGCTTGC AATGACGAAGCGACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGTAAGATA TGGCTTTAAAGAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACCGTCATGATGGGCGCA CTCGTCAACCTCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTGGAGTGATACC CCTCCATGGAGCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAATTGGCACCAT CATAGAGACGGCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAAGATTATAAATCTA TATGTACACCATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGCATTATTCATGATAAC ATCCTTGCAGATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTACTTCTAGTATTTT AGCTGCAGCTGTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTGCGAGACTTGTTTTGG TGTTAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAAATGTACTTCA AGCTTTCCTGGAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTGAATTGCAGCAACG GCTTCTTGTGGTATTTACCGGTCAAGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGG ATAATCTTTTGGTATCAAGTATCAAGCGCCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATT GATGAATTTGGGGAGATAATGTTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGA CAGGCTATTTTCTTTTGCTAGTCCCTACTGCTGTGGTTACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTAC TTGCCAGAGACAAACAGCGAGCCAAGGAACTCAGACAGAGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGAT TGGCATATATCTCTATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0794600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MERRAKQKEDLTSLLRKSWYHLRLSVRHPSRVPTWDAIVLTAASPDQAHLYTWQLNRAKRLGRIAPSTVTLAVPDPLGCR IGSGAATLNAIHALALHYHTTTQTLLANKHILLLHAGGDSKRVPWANPMGKVFLPLPYLASDEPDGPVPLLFDHILAIAS CARQAFGDQGGMLTMTGDVLPCFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETERSTKSYAVSLVDNLLQKPTLE ELVENKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQPMISELLESKKEMSLYEDLVAAWVPAKHEWLRKRPLGEELV NKLGKHKMFSYCAYDLLFLHFGTSSEVLDHLSGAGSELVGRRHMCSIPATTASDITASAIILSSEIAPGVSIGEDSLIYD SSISAGIHIGSLCIVVGVNISLDDYICTEDSIKFMLPDRHCLWEVPLVGSSERVLVYSGLHDNPKSSLSKDGTFCGKPWK KVLNDLGIQESDLWGSSGTHEKCLWNSRIFPILPYAQMLKVAMWLVGLAKHKSEYFSLWISAPRISLEELHRSIDFSTMC IGSRNHQADLAAGIAKACIRYGMLGRNLSQLCEEILQKEGSGVEICKDFLAMCPKVQEENSNILPESRAYQVQVDLLRAC NDEATACELEHKVWAAVADETASAVRYGFKEHLSESPGSLSCQEYQSNRHDGRTRQPLHPKRVKVELPVRVDFVGGWSDT PPWSIERAGCVLNMAISLEGSLPIGTIIETAETTGVLITDDTDNHLYIEDYKSICTPFNGDDLFRLVKSALLVTGIIHDN ILADMGMHIKTWANVPRGSGLGTSSILAAAVVKGLLQIIDGDDSTENVARLVLVLEQLMGTGGGWQDQIGGLYPGIKCTS SFPGIPLRLQVVPLLASPELISELQQRLLVVFTGQVRLAKKVLQKVVTRYIRRDNLLVSSIKRLVELAKIGREALMNCEI DEFGEIMLEAWRLHQELDPFCSNESVDRLFSFASPYCCGYKLVGAGGGGFALLLARDKQRAKELRQRLQDEKHLEVKIYD WHISL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32463
25 1044 1020 0.0 –
Pfam
PF07959
116 513 398 4.8E-116
IPR012887
MobiDBLite
mobidb-lite
675 696 22 - –
SUPERFAMILY
SSF54211
701 884 184 4.48E-22
IPR020568
Gene3D
G3DSA:3.30.230.120
702 1043 342 3.0E-90 –
Pfam
PF00288
808 870 63 1.1E-8
IPR006204
PRINTS
PR00959
813 835 23 3.0E-8 –
SUPERFAMILY
SSF55060
903 1031 129 2.4E-22
IPR036554
Pfam
PF08544
955 1030 76 8.5E-8
IPR013750
PRINTS
PR00959
999 1016 18 3.0E-8 –
Coils
Coil
1011 1034 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0794600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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