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LotjaGi1g1v0794600.4

Overview

Field Value
Gene ID LotjaGi1g1v0794600
Transcript ID LotjaGi1g1v0794600.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Bifunctional fucokinase/fucose pyrophosphorylase; TAIR: AT1G01220.1 L-fucokinase/GDP-L-fucose pyrophosphorylase; Swiss-Prot: sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase; TrEMBL-Plants: tr|G7L443|G7L443_MEDTR L-fucokinase/GDP-L-fucose pyrophosphorylase; Found in the gene: LotjaGi1g1v0794600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136570389..136575908) extracted from Lotus japonicus Gifu genome v1.2.

CTCACTCGAAGAAGAAAGAGATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGGTAC CATCTCAGGTTATCTGTCCGTCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGATCA AGCTCACCTCTACACCTGGCAGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCGTCC CCGACCCTCTTGGTTGCCGCATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGCCCTCGCTCTCCATTACCACACC ACCACCCAGGTACCCTTCATTTCCTATTTCTCAGATTTCAACTAACTCAAAAAGGAATTTCAAATCTATAATCATTTATC ACTGTTTTTTACTTACAGGTGTCAACTACCAATGGCACTGATGATTCTCTTCTTCTCCCAATGGCTACCTTGCTGGCCAA TAAGCATATACTATTGCTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTCTTC CTCTTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATACTTGCCATTGCTTCTTGT GCAAGACAAGCTTTTGGGGATCAAGGTTGTTTTCTTCATATATGCATTCATTCAAGTTAAATTTTATTGTTTGTTCTAGC CCTTTTCCCTGTCCTTTGTATATGACAGAACATAACTTCAAGTGTTTTAAATATCAAATTTTCAAACTTGTCCTGTATTT TATCCCCTTTCCATATGTTAGGGAATTCTGTATATGGATATATATTCATTATTCAATATGGCATTAGTGATAAAAATTTA ATTTAACCAAACACTTAACAACATTATCATTGTTCTTTCTCAATGGGATTTATTTGCTGTCTTTTTCTCTGGGGTTACCT GCTGCTGATGTTTGCATAAAAATTCATTCAATCCTCTCACAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCATGT TTTGACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAAA CCATGGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCCAGA AACCTACTTTAGAAGAGCTAGTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGCA GTTAGAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCAA AAAGGAGGTACACTACATTGTTTGGTTTTTATGGGTGGAAAAGAAACGAAATGAAAGTATTAAATAATTAAATTCGTTGT TATGCTTTTGTATATAGGGAATGAGAACAAATTGCTAAAACCAAGTTTATTTGATTGAAGTCAAGATTGTCATTTAATAT ATAAAATAGATATATATTTTGATATTCTATGCAGGACTTAAAATATGGTGCAGCAGCTTCCATCCAAATCTGTCCACTTA TAGACAAAATGGACTTTTTTTGGGGGAGGGGTGTTTCATTTCATCACTTTATAAAGTAACATACGGAGAAAGATAGGTTG CTTTACGGTCATTGCACACAATTCCATTCAACCATACAAATCATGAATTTTATATGTTATGAGTGCCATGCCAGTAATAT CTTTGACGAGCTTACTTTGAGTGCTCTTATAAGCCATGTTTAGTAAAACATCTTTGTAAAATACACAAATGAACTGATAT CATGAGACCTCTATTCATCGTTTTAAGTAACAACTAATGGTAACATTGCCTCAGTTAGGTCCTACTGCAGCTACTTTGGT TGACCTTGCATGTAATAAAAGATCACTTTTCTGATTTAAGGAAACTTTATATATTTTGGTGTGTGCCCATGCTGATATTT TTGTTATCCCACTTTTCCTTCTTTCTAACTTGATTACTATTCATGTTGTTAAGTTTTCTTCAATTTGAGTGTAAATTTCA ATTAACAAAAGAATTTTTGTTATATAAATACCTACAAAGTCTGCCCATGTAAATAGCTACCAAAGCACGAAATGCTCTTG TTTGTTTGAAGAACAATGAAAGTATTTTATCTAAGAATAAATGCTTTGTGCTGTGCAGATGAGTTTATATGAAGATCTGG TTGCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAATAAATTGGGAAAG CATAAGATGTTCAGCTACTGTGCCTGTATGTCAAGCTCAATTGCAATCTTCTCTCTGTATCTGCAATTCTGCACAGTCCT CTATCTATCTGTACAAACATTGATTCTCTCATATATTATGCCATTGCAGATGATTTGTTGTTCTTGCATTTTGGGACCTC AAGTGAAGTACTAGATCACCTCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAGCTACCA CTGCATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATTCTCTC ATATATGATTCGTCTATTTCTGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGATGA CTATATATGCACTGAAGATTCAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAAGTA GTGAGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGGAAA CCCTGGAAGAAAGTTTTGAATGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTGTTT ATGGAATTCAAGAATCTTCCCCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTAAAC ATAAAAGTGAATACTTTTCTTTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCC ACAATGTGCATAGGTTCACGTAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGGAATGCT GGGGCGCAATTTGTCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCCTAG CTATGTGTCCAAAAGTTCAGGAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTTCTT CGAGCTTGCAATGACGAAGCGACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGC AGTAAGATATGGCTTTAAAGGTACATGCTTTAATCATGGTCATGCCCCAAGATGCCATCTTCATGAAAAAACAAATTGCA AACAGTTCAGTGCTGCTGGCATTTTTTTTTAAGGTGTGGTGGTGACTATTGAAAGAATTAACTTTAAGGTTGAGCGATTG AAAACCAAAGTTTTCTGTGAAGATAAATTATTGAGATATTATAGCATCTCTATGTGATTGATGGTGGGTAGTATTAGTTT CTCATAGTATTATCTCTCTATAATCAACTCTCAAAATACAGACTTAGAAAAAGAGTTATCTATGATTAACGATTAACGCC ATTTAGAATTCATTTGACCTCAAGAGTAGTTACAACTAGCTATCTAAGTGTTTTGTTTTTAAATCTTACATATCACATTC TCCATTCCTATATTTGAAGGAATGGACAATTGCTTCTAAATATTCATGTAAAAAATTAGAGAACTGATTTTCTTATAGCT GAATTCGTTCTCTTTCTGTAGAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACCGTCAT GATGGGCGCACTCGTCAACCTCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTG GAGTGATACCCCTCCATGGAGCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAA TTGGCACCATCATAGAGACGGCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAAGAT TATAAATCTATATGTACACCATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGCATTAT TCATGATAACATCCTTGCAGATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTACTT CTAGTATTTTAGCTGCAGCTGTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTGCGAGA CTTGTTTTGGTGTTAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAA ATGTACTTCAAGCTTTCCTGGAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTGAAT TGCAGCAACGGCTTCTTGTGGTATTTACCGGTCAAGTAAGTATTTGTTTGTTCATATGAAAATGCATTTTGCGTTCCTCC ATGCACCACCAATTATTGCCTAAAAGCTTGTAGTGTACGCTTTGGATCAACATTATTTTTCCTCATAATCAATTTTACAC CGCCACGCACCAAAGTTTCTCCTCATAATTGAATTTGGCTTTAGAATCAACTGTAGAAATATTTCCAAATATGCACAAGG ACAGGAATTAAAGCTCCTGGGGAAAAGCTTCAATATTGGACAAATCGCAAATTAGCAATAGTTTCCAGATTAAAATTTCA GGAGATATGTTGTTCACGTTTTGTTTTGAATTTTTGTTTCTTTTTTAACATATATAATTACACATCTTATTTAATGTTGT CATTTTGAAGCTAGTGCGGCCATTCACTAAATTCAACATCCTATATTACTAACTTTGATTTTGGATTTACATGGAAATGT TTTGCAGGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGGATAATCTTTTGGTATCAA GTATCAAGCGCCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGATGAATTTGGGGAGATA ATGTTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACAGGCTATTTTCTTTTGC TAGTCCCTACTGCTGTGGTTACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTACTTGCCAGAGACAAACAGC GAGCCAAGGAACTCAGACAGAGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGATTGGCATATATCTCTATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0794600.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGGTACCATCTCAGGTTATCTGTCCG TCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGATCAAGCTCACCTCTACACCTGGC AGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCGTCCCCGACCCTCTTGGTTGCCGC ATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGTGTCAACTACCAATGGCACTGATGATTCTCTTCTTCTCCCAAT GGCTACCTTGCTGGCCAATAAGCATATACTATTGCTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTA TGGGGAAAGTGTTTCTTCCTCTTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATA CTTGCCATTGCTTCTTGTGCAAGACAAGCTTTTGGGGATCAAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCATG TTTTGACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAA ACCATGGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCCAG AAACCTACTTTAGAAGAGCTAGTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGC AGTTAGAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCA AAAAGGAGATGAGTTTATATGAAGATCTGGTTGCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTG GGTGAAGAACTAGTTAATAAATTGGGAAAGCATAAGATGTTCAGCTACTGTGCCTATGATTTGTTGTTCTTGCATTTTGG GACCTCAAGTGAAGTACTAGATCACCTCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAG CTACCACTGCATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGAT TCTCTCATATATGATTCGTCTATTTCTGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCT AGATGACTATATATGCACTGAAGATTCAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTG GAAGTAGTGAGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGT GGGAAACCCTGGAAGAAAGTTTTGAATGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAA GTGTTTATGGAATTCAAGAATCTTCCCCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAG CTAAACATAAAAGTGAATACTTTTCTTTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGAT TTCTCCACAATGTGCATAGGTTCACGTAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGG AATGCTGGGGCGCAATTTGTCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATT TCCTAGCTATGTGTCCAAAAGTTCAGGAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGAT CTTCTTCGAGCTTGCAATGACGAAGCGACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGC TTCAGCAGTAAGATATGGCTTTAAAGAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACC GTCATGATGGGCGCACTCGTCAACCTCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGT GGTTGGAGTGATACCCCTCCATGGAGCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCT TCCAATTGGCACCATCATAGAGACGGCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTG AAGATTATAAATCTATATGTACACCATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGC ATTATTCATGATAACATCCTTGCAGATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGG TACTTCTAGTATTTTAGCTGCAGCTGTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTG CGAGACTTGTTTTGGTGTTAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGG ATTAAATGTACTTCAAGCTTTCCTGGAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTC TGAATTGCAGCAACGGCTTCTTGTGGTATTTACCGGTCAAGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTA GATATATTCGGCGGGATAATCTTTTGGTATCAAGTATCAAGCGCCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTG ATGAACTGTGAGATTGATGAATTTGGGGAGATAATGTTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAG TAATGAGTCTGTTGACAGGCTATTTTCTTTTGCTAGTCCCTACTGCTGTGGTTACAAACTGGTTGGTGCTGGTGGCGGAG GCTTTGCCCTCTTACTTGCCAGAGACAAACAGCGAGCCAAGGAACTCAGACAGAGGCTACAAGATGAGAAACATCTTGAA GTCAAAATCTATGATTGGCATATATCTCTATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0794600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MERRAKQKEDLTSLLRKSWYHLRLSVRHPSRVPTWDAIVLTAASPDQAHLYTWQLNRAKRLGRIAPSTVTLAVPDPLGCR IGSGAATLNAIHVSTTNGTDDSLLLPMATLLANKHILLLHAGGDSKRVPWANPMGKVFLPLPYLASDEPDGPVPLLFDHI LAIASCARQAFGDQGGMLTMTGDVLPCFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETERSTKSYAVSLVDNLLQ KPTLEELVENKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQPMISELLESKKEMSLYEDLVAAWVPAKHEWLRKRPL GEELVNKLGKHKMFSYCAYDLLFLHFGTSSEVLDHLSGAGSELVGRRHMCSIPATTASDITASAIILSSEIAPGVSIGED SLIYDSSISAGIHIGSLCIVVGVNISLDDYICTEDSIKFMLPDRHCLWEVPLVGSSERVLVYSGLHDNPKSSLSKDGTFC GKPWKKVLNDLGIQESDLWGSSGTHEKCLWNSRIFPILPYAQMLKVAMWLVGLAKHKSEYFSLWISAPRISLEELHRSID FSTMCIGSRNHQADLAAGIAKACIRYGMLGRNLSQLCEEILQKEGSGVEICKDFLAMCPKVQEENSNILPESRAYQVQVD LLRACNDEATACELEHKVWAAVADETASAVRYGFKEHLSESPGSLSCQEYQSNRHDGRTRQPLHPKRVKVELPVRVDFVG GWSDTPPWSIERAGCVLNMAISLEGSLPIGTIIETAETTGVLITDDTDNHLYIEDYKSICTPFNGDDLFRLVKSALLVTG IIHDNILADMGMHIKTWANVPRGSGLGTSSILAAAVVKGLLQIIDGDDSTENVARLVLVLEQLMGTGGGWQDQIGGLYPG IKCTSSFPGIPLRLQVVPLLASPELISELQQRLLVVFTGQVRLAKKVLQKVVTRYIRRDNLLVSSIKRLVELAKIGREAL MNCEIDEFGEIMLEAWRLHQELDPFCSNESVDRLFSFASPYCCGYKLVGAGGGGFALLLARDKQRAKELRQRLQDEKHLE VKIYDWHISL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32463
25 1049 1025 0.0 –
Pfam
PF07959
121 518 398 4.8E-116
IPR012887
MobiDBLite
mobidb-lite
680 701 22 - –
SUPERFAMILY
SSF54211
706 889 184 4.48E-22
IPR020568
Gene3D
G3DSA:3.30.230.120
707 1048 342 3.0E-90 –
Pfam
PF00288
813 875 63 1.1E-8
IPR006204
PRINTS
PR00959
818 840 23 3.0E-8 –
SUPERFAMILY
SSF55060
908 1036 129 2.4E-22
IPR036554
Pfam
PF08544
960 1035 76 8.6E-8
IPR013750
PRINTS
PR00959
1004 1021 18 3.0E-8 –
Coils
Coil
1016 1039 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0794600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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