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LotjaGi1g1v0794600.5

Overview

Field Value
Gene ID LotjaGi1g1v0794600
Transcript ID LotjaGi1g1v0794600.5
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Bifunctional fucokinase/fucose pyrophosphorylase; TAIR: AT1G01220.1 L-fucokinase/GDP-L-fucose pyrophosphorylase; Swiss-Prot: sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase; TrEMBL-Plants: tr|G7L443|G7L443_MEDTR L-fucokinase/GDP-L-fucose pyrophosphorylase; Found in the gene: LotjaGi1g1v0794600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136570389..136576151) extracted from Lotus japonicus Gifu genome v1.2.

ATAAAAAGAAAAAGTACAACAACTATAACATCGAATGTTGAGGAGGTTTCGTGGTGTAGTTGGTTATCACGTCAGTCTAA CACACTGAAGGTCTCCGGTTCGAACCCGGGCGAAGCCATTTTGTTTTGTTGTTTTCCTCTCTTTTTACAAAACATGTTTT GTTTTACAGTTGCGGTAGTTATTTTGTGTCGGTAGTAGGAATAATAATTTGATTCCTCTTCTTCTCTTTTCCTCACTCTC ACTCTCACTCGAAGAAGAAAGAGATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGG TACCATCTCAGGTTATCTGTCCGTCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGA TCAAGCTCACCTCTACACCTGGCAGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCG TCCCCGACCCTCTTGGTTGCCGCATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGCCCTCGCTCTCCATTACCAC ACCACCACCCAGGTACCCTTCATTTCCTATTTCTCAGATTTCAACTAACTCAAAAAGGAATTTCAAATCTATAATCATTT ATCACTGTTTTTTACTTACAGGTGTCAACTACCAATGGCACTGATGATTCTCTTCTTCTCCCAATGGCTACCTTGCTGGC CAATAAGCATATACTATTGCTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTC TTCCTCTTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATACTTGCCATTGCTTCT TGTGCAAGACAAGCTTTTGGGGATCAAGGTTGTTTTCTTCATATATGCATTCATTCAAGTTAAATTTTATTGTTTGTTCT AGCCCTTTTCCCTGTCCTTTGTATATGACAGAACATAACTTCAAGTGTTTTAAATATCAAATTTTCAAACTTGTCCTGTA TTTTATCCCCTTTCCATATGTTAGGGAATTCTGTATATGGATATATATTCATTATTCAATATGGCATTAGTGATAAAAAT TTAATTTAACCAAACACTTAACAACATTATCATTGTTCTTTCTCAATGGGATTTATTTGCTGTCTTTTTCTCTGGGGTTA CCTGCTGCTGATGTTTGCATAAAAATTCATTCAATCCTCTCACAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCA TGTTTTGACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTC AAACCATGGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCC AGAAACCTACTTTAGAAGAGCTAGTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATA GCAGTTAGAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAG CAAAAAGGAGGTACACTACATTGTTTGGTTTTTATGGGTGGAAAAGAAACGAAATGAAAGTATTAAATAATTAAATTCGT TGTTATGCTTTTGTATATAGGGAATGAGAACAAATTGCTAAAACCAAGTTTATTTGATTGAAGTCAAGATTGTCATTTAA TATATAAAATAGATATATATTTTGATATTCTATGCAGGACTTAAAATATGGTGCAGCAGCTTCCATCCAAATCTGTCCAC TTATAGACAAAATGGACTTTTTTTGGGGGAGGGGTGTTTCATTTCATCACTTTATAAAGTAACATACGGAGAAAGATAGG TTGCTTTACGGTCATTGCACACAATTCCATTCAACCATACAAATCATGAATTTTATATGTTATGAGTGCCATGCCAGTAA TATCTTTGACGAGCTTACTTTGAGTGCTCTTATAAGCCATGTTTAGTAAAACATCTTTGTAAAATACACAAATGAACTGA TATCATGAGACCTCTATTCATCGTTTTAAGTAACAACTAATGGTAACATTGCCTCAGTTAGGTCCTACTGCAGCTACTTT GGTTGACCTTGCATGTAATAAAAGATCACTTTTCTGATTTAAGGAAACTTTATATATTTTGGTGTGTGCCCATGCTGATA TTTTTGTTATCCCACTTTTCCTTCTTTCTAACTTGATTACTATTCATGTTGTTAAGTTTTCTTCAATTTGAGTGTAAATT TCAATTAACAAAAGAATTTTTGTTATATAAATACCTACAAAGTCTGCCCATGTAAATAGCTACCAAAGCACGAAATGCTC TTGTTTGTTTGAAGAACAATGAAAGTATTTTATCTAAGAATAAATGCTTTGTGCTGTGCAGATGAGTTTATATGAAGATC TGGTTGCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAATAAATTGGGA AAGCATAAGATGTTCAGCTACTGTGCCTGTATGTCAAGCTCAATTGCAATCTTCTCTCTGTATCTGCAATTCTGCACAGT CCTCTATCTATCTGTACAAACATTGATTCTCTCATATATTATGCCATTGCAGATGATTTGTTGTTCTTGCATTTTGGGAC CTCAAGTGAAGTACTAGATCACCTCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAGCTA CCACTGCATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATTCT CTCATATATGATTCGTCTATTTCTGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGA TGACTATATATGCACTGAAGATTCAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAA GTAGTGAGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGG AAACCCTGGAAGAAAGTTTTGAATGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTG TTTATGGAATTCAAGAATCTTCCCCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTA AACATAAAAGTGAATACTTTTCTTTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTC TCCACAATGTGCATAGGTTCACGTAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGGAAT GCTGGGGCGCAATTTGTCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCC TAGCTATGTGTCCAAAAGTTCAGGAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTT CTTCGAGCTTGCAATGACGAAGCGACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTC AGCAGTAAGATATGGCTTTAAAGGTACATGCTTTAATCATGGTCATGCCCCAAGATGCCATCTTCATGAAAAAACAAATT GCAAACAGTTCAGTGCTGCTGGCATTTTTTTTTAAGGTGTGGTGGTGACTATTGAAAGAATTAACTTTAAGGTTGAGCGA TTGAAAACCAAAGTTTTCTGTGAAGATAAATTATTGAGATATTATAGCATCTCTATGTGATTGATGGTGGGTAGTATTAG TTTCTCATAGTATTATCTCTCTATAATCAACTCTCAAAATACAGACTTAGAAAAAGAGTTATCTATGATTAACGATTAAC GCCATTTAGAATTCATTTGACCTCAAGAGTAGTTACAACTAGCTATCTAAGTGTTTTGTTTTTAAATCTTACATATCACA TTCTCCATTCCTATATTTGAAGGAATGGACAATTGCTTCTAAATATTCATGTAAAAAATTAGAGAACTGATTTTCTTATA GCTGAATTCGTTCTCTTTCTGTAGAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACCGT CATGATGGGCGCACTCGTCAACCTCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGG TTGGAGTGATACCCCTCCATGGAGCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTC CAATTGGCACCATCATAGAGACGGCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAA GATTATAAATCTATATGTACACCATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGCAT TATTCATGATAACATCCTTGCAGATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTA CTTCTAGTATTTTAGCTGCAGCTGTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTGCG AGACTTGTTTTGGTGTTAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGAT TAAATGTACTTCAAGCTTTCCTGGAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTG AATTGCAGCAACGGCTTCTTGTGGTATTTACCGGTCAAGTAAGTATTTGTTTGTTCATATGAAAATGCATTTTGCGTTCC TCCATGCACCACCAATTATTGCCTAAAAGCTTGTAGTGTACGCTTTGGATCAACATTATTTTTCCTCATAATCAATTTTA CACCGCCACGCACCAAAGTTTCTCCTCATAATTGAATTTGGCTTTAGAATCAACTGTAGAAATATTTCCAAATATGCACA AGGACAGGAATTAAAGCTCCTGGGGAAAAGCTTCAATATTGGACAAATCGCAAATTAGCAATAGTTTCCAGATTAAAATT TCAGGAGATATGTTGTTCACGTTTTGTTTTGAATTTTTGTTTCTTTTTTAACATATATAATTACACATCTTATTTAATGT TGTCATTTTGAAGCTAGTGCGGCCATTCACTAAATTCAACATCCTATATTACTAACTTTGATTTTGGATTTACATGGAAA TGTTTTGCAGGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGGATAATCTTTTGGTAT CAAGTATCAAGCGCCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGATGAATTTGGGGAG ATAATGTTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACAGGCTATTTTCTTT TGCTAGTCCCTACTGCTGTGGTTACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTACTTGCCAGAGACAAAC AGCGAGCCAAGGAACTCAGACAGAGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGATTGGCATATATCTCTA TAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0794600.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGACCATGACTGGTGATGTTCTTCCATGTTTTGACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCAT CACCGTTCCGATCACCCTTGATGTTGCTTCAAACCATGGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTT ATGCAGTCAGTTTAGTAGATAATCTCCTCCAGAAACCTACTTTAGAAGAGCTAGTTGAAAATAAGGCTGTTCTAGCTGAT GGTAGAACACTTCTTGATACCGGAATAATAGCAGTTAGAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTG TCAGCCAATGATTTCAGAGCTCCTAGAAAGCAAAAAGGAGATGAGTTTATATGAAGATCTGGTTGCTGCCTGGGTACCTG CAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAATAAATTGGGAAAGCATAAGATGTTCAGCTAC TGTGCCTATGATTTGTTGTTCTTGCATTTTGGGACCTCAAGTGAAGTACTAGATCACCTCAGTGGCGCGGGTTCAGAATT GGTTGGTAGAAGACACATGTGTTCTATTCCAGCTACCACTGCATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTG AAATTGCACCTGGTGTCTCAATTGGGGAAGATTCTCTCATATATGATTCGTCTATTTCTGCTGGAATACATATTGGCTCC CTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGATGACTATATATGCACTGAAGATTCAATCAAGTTTATGCTTCCAGA TCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAAGTAGTGAGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCA AAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGGAAACCCTGGAAGAAAGTTTTGAATGACTTGGGCATTCAAGAAAGT GACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTGTTTATGGAATTCAAGAATCTTCCCCATACTTCCTTATGCTCAAAT GCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTAAACATAAAAGTGAATACTTTTCTTTGTGGATATCTGCCCCGCGCA TCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACAATGTGCATAGGTTCACGTAATCATCAAGCTGATCTCGCA GCAGGAATTGCAAAAGCATGCATTAGGTATGGAATGCTGGGGCGCAATTTGTCTCAACTATGTGAAGAAATTCTTCAAAA GGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCCTAGCTATGTGTCCAAAAGTTCAGGAGGAAAACTCTAATATACTTC CCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTTCTTCGAGCTTGCAATGACGAAGCGACAGCATGCGAGTTGGAGCAC AAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGTAAGATATGGCTTTAAAGAACATTTATCAGAGTCTCCTGG TAGCCTCTCATGTCAGGAGTACCAAAGTAACCGTCATGATGGGCGCACTCGTCAACCTCTCCATCCTAAAAGAGTAAAAG TAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTGGAGTGATACCCCTCCATGGAGCATTGAACGTGCTGGGTGTGTT CTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAATTGGCACCATCATAGAGACGGCTGAAACAACAGGAGTATTAAT TACTGATGACACAGACAACCATTTATACATTGAAGATTATAAATCTATATGTACACCATTCAATGGCGATGATCTATTTC GGCTTGTCAAATCCGCATTACTTGTGACTGGCATTATTCATGATAACATCCTTGCAGATATGGGCATGCACATTAAGACA TGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTACTTCTAGTATTTTAGCTGCAGCTGTGGTGAAAGGGCTTCTTCAGAT AATTGATGGAGATGACAGCACTGAGAATGTTGCGAGACTTGTTTTGGTGTTAGAACAACTCATGGGGACAGGAGGTGGCT GGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAAATGTACTTCAAGCTTTCCTGGAATTCCATTGCGGCTTCAAGTG GTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTGAATTGCAGCAACGGCTTCTTGTGGTATTTACCGGTCAAGTTCGGCT TGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGGATAATCTTTTGGTATCAAGTATCAAGCGCCTTG TTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGATGAATTTGGGGAGATAATGTTGGAAGCTTGG AGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACAGGCTATTTTCTTTTGCTAGTCCCTACTGCTG TGGTTACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTACTTGCCAGAGACAAACAGCGAGCCAAGGAACTCA GACAGAGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGATTGGCATATATCTCTATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0794600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLTMTGDVLPCFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETERSTKSYAVSLVDNLLQKPTLEELVENKAVLAD GRTLLDTGIIAVRGKAWLELVTLACSCQPMISELLESKKEMSLYEDLVAAWVPAKHEWLRKRPLGEELVNKLGKHKMFSY CAYDLLFLHFGTSSEVLDHLSGAGSELVGRRHMCSIPATTASDITASAIILSSEIAPGVSIGEDSLIYDSSISAGIHIGS LCIVVGVNISLDDYICTEDSIKFMLPDRHCLWEVPLVGSSERVLVYSGLHDNPKSSLSKDGTFCGKPWKKVLNDLGIQES DLWGSSGTHEKCLWNSRIFPILPYAQMLKVAMWLVGLAKHKSEYFSLWISAPRISLEELHRSIDFSTMCIGSRNHQADLA AGIAKACIRYGMLGRNLSQLCEEILQKEGSGVEICKDFLAMCPKVQEENSNILPESRAYQVQVDLLRACNDEATACELEH KVWAAVADETASAVRYGFKEHLSESPGSLSCQEYQSNRHDGRTRQPLHPKRVKVELPVRVDFVGGWSDTPPWSIERAGCV LNMAISLEGSLPIGTIIETAETTGVLITDDTDNHLYIEDYKSICTPFNGDDLFRLVKSALLVTGIIHDNILADMGMHIKT WANVPRGSGLGTSSILAAAVVKGLLQIIDGDDSTENVARLVLVLEQLMGTGGGWQDQIGGLYPGIKCTSSFPGIPLRLQV VPLLASPELISELQQRLLVVFTGQVRLAKKVLQKVVTRYIRRDNLLVSSIKRLVELAKIGREALMNCEIDEFGEIMLEAW RLHQELDPFCSNESVDRLFSFASPYCCGYKLVGAGGGGFALLLARDKQRAKELRQRLQDEKHLEVKIYDWHISL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF07959
1 342 342 2.7E-94
IPR012887
PANTHER
PTHR32463
2 873 872 2.6E-292 –
MobiDBLite
mobidb-lite
503 525 23 - –
SUPERFAMILY
SSF54211
530 713 184 3.34E-22
IPR020568
Gene3D
G3DSA:3.30.230.120
531 872 342 2.1E-90 –
Pfam
PF00288
637 699 63 8.9E-9
IPR006204
PRINTS
PR00959
642 664 23 2.1E-8 –
SUPERFAMILY
SSF55060
732 860 129 1.85E-22
IPR036554
Pfam
PF08544
784 859 76 6.8E-8
IPR013750
PRINTS
PR00959
828 845 18 2.1E-8 –
Coils
Coil
840 863 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0794600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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