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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0078100 |
Transcript ID | LotjaGi2g1v0078100.5 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G41750.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7JKN6|G7JKN6_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi2g1v0078100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:20941842..20950184) extracted from Lotus japonicus Gifu genome v1.2.
ATCAACAATTTATTTTCCTTGCATATCAAAACTAGCAAGAGGAGAAAATTCAGGCTGAACCTCAAGTACACATGGGTTTG AAAAAAAACAGGGCATACCCACCCTCCTTCTCATACAGCCGCTAGAAGCCTAGAACCAGCCCTCCCCTACTCAACTACCC GTCAATACTCCAACTAAGAGGAAGAAGAAAACTGACAGCAATTCCCTGCACTTCATAAACGTGATTCACAGGCTCTCTAA GCATATCCTTCAACAGAAGAAGACTATAACAGAAGAAGATGACCACGCCAGAAAAACGGTGCGGCAACGGTTGGAGGAAC GTGACGGCGTCGACGGCGGAGGTGGAAGACTAGGGTTTGATGCTGCTGAGAGGTGGAAACCGTGTTTCTATTTCTGAGGT GGATGGAAACCGTGTTTCTTTTTTTTTTTTTTTTCAAAAAACCGTGTTTCTAATTTTGTTTTTTGCAACCTCTCATTTGG CATGGGCTGAGCCCATTTTGACAAAAAAAGAGAAAAAAACCTTAAACCGGCAGAAACTGAGAACCGGCCGGTTTTCACCG GTTCCCGTTCCGGCGGTCGAACCGGCCGGTCCGGTCCGGTTTTTATAACCATGCTGCTAATGTCAAGTGGTTAATGCTAA AAATTCCTGGGATGGATAAAGTGTGTGGATGTTGAGAGGCATTGAGAAAATCAATATTCATAGTGATAGTGGGGTCAGTA GTTAGCCGCCTCGGTCAAGTCAAATGAGACTGCTTCTTTTTCTTCTTCAGATCAAGCTAGAGCATAGAGAATCAAAAATA ATATAGCAAGTTTTGAATCAGATTTCTAGCACCCAGATCAGGTAAAATTACTTTCAATTTCAGTAATTTCTTGTATGAAA TATCCTCCTCCTCCTCTTTAATTCCACTCATTTTCATTTTTTATATGTTTTATTTATACTGATTTATCTTGTGTTTCCCT TATTGAGATTCAGACAGATTGTAGAGACAAAGAAAGAGCAGCACTTGTTTCAATTCAATGACATCTTCTTCTGGAGCTTC TCAAATAATATGTGCTGTACTGGTTGCATGTATTACTGGTTGCATACTGATGTACTTTAGAGTTAAGAAGAAAGAAATCA TCAAGACAGAAATTGTCACAAAGGTGATTGTTGTTTCTCACTTTCTCTTATACAATTTCACTCTCATTTATTGTTGTGAT GTTTTCTTATCATGATGGTTTTACGGATTATATCTGCTATTAATATGCATTGCAATTCACGGAGGAATTTCTAATTTTTA TTTTATTTTTCTAATTCGATTTGTATTTGTTATATCTCTGGCAATTTGTTAAGTTATTTACTTTTTAAAATCTTGATTTG GATTGATCTTTCCCACAAGCTCTTTGGCAGGATCAAGCGCAAGTTTGCGCATTAGTACGTATCACTTAAGAAAAAATATA AAACAATTAATTTGCTTCTCAAACACTACATGCTGTATTTATGTCTTTACTTATAATTTAGTAAACGTTTTTCAATTGTT GATGTATTTCATTTATGTTATAATATGAAGAATATAATACTTTTATTTTGACAAACTTAAGGATGAAGTGTCAAAGTCAA GGTCAAACAACATTCCTCCAATAAAGTATGATTTATTTGTAAGCTTTCATGGAAAGGACATTCGTGACACTTTTCTTAGT CATTTGATTGAAGCTTTTGCTCGAAGAAAAATAAACGCCTTCGTAGATGATAAACTTGAGACGGGAGAAGATATATGGCT ATCACTTGTTGAAGCAATTAAAGGATCGTCCATTTCATTGATCATATTCTCCGAAAATTATGCCTTTTCACATTGGTGTT TGGAAGAACTCGTGAAAATACTTGAGTGCAAAGAGAAATATGGACGGATTGTTGTTCCTATTTTCTATAATGTAGAACCT TCGAATGTAAGACATCAAAGGGGGAGTTATGAAAATGCATTTACTGAACTTGAAAAGAGGTATGATTTTCCAAGGGTGCA AATCTGGAGACAAGCATTGACCTCATTAGCTAATTTATCAGGAATCACTTCATTAAAATATCGGTAAGTTTTCTCCGCAT AAAATATTTTCCAGCAATTTACTCTTCATATGTGCATATTATCATAAGCTTGTCTCTTTCATAACAAAAACTTGACTAAC CGGTGGTTGGTTCAAGTGGAACATTTTTTTATTTTCCCTTAAGCAAGGTCTTGAGTTTGAGTTTTGTATATGAAAAACAT CACTGATATTTTATAGTGCACAAAAATGTGCTCTGTCAAATAAAAAAAGCTTTATATTTATTTTCTACGTTTTAATTTAA TGTACGCTTTTGCTTCATGTATTAGTTATTGCTGCAACTCATTCATTCAAACTACGAGTAGATCAGGCTAGCCATGTTTT GTTGGTTTATTGAATTTAGTGGTTAAATCAGGTCCAAGAAAAACAGTAACCACATTCAACATAAGCCTTCTAATTGTTAT AGTTGTTGACCTTCTTAAAATTATGACATGAATATGGCTGTTTTCCCTAAAAAAATTGGTTGTTTAATGTGGGAAGATAC TATCTTCCATGGTAGCATGAGGTTTTCAGGTTAGCTACGTCACATTTGTAAACCATTGATCACTATGGGGAACGGGAAAC CCAAGAAAAGGAACATTCTATTGTTTTTGAACTCCTATATACAAACTTACAACCGAGAGTTATTTATAGTAATCCCATTA TATTTACTACATTTTCTCTCTTTTTGTTGTTTAGGAATGATGCTGATTTGCTTGAAGAAATCATCAATCGTGTGTTGATG AGTATGCCTAAGTATCCGGTTAACAGAAAAAGACTTATTGGAATGGAAAAACCAATTGCAGATTTGGAATCATTGCTATG GAAGGAGTCAACAAAGGCACACATCATCGGAATTTGGGGTATGGGCGGTATTGGCAAGACAACTATTGTAGAAGAGATAT TTGGCAAAAAATGTTTCGAGTATGGAGGATCTTGTTTTCTGTCAAAGGTAAAAGATAAACTACAAAAAGAAGGAATACAA TCTTTGAAAGAAAAACTCTTTTCAAAACTATTAGCAGAAGATGTGAAAATTTACACCCCAAATTTATTGCCCAGTGATAT TGAAAAAAGGATTGGTCGGATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATACAGATCAGGTAGAAAATATATTTG GAACGGTTGATTGGCTTCACTCAGGTAGTAGAATAATAATAACAACTAGAGATAAGCAAGTACTTATTTCTAACAAAGTC GATGACATATACCAAATTGGGGAATTGAGTTATAGTGAAGCACTTGAACTTTTCAATTTGAGTGCATTTAACCAAATTCA TCTTGAACAAGAGTATGATGATCTATCACAAAGGGTGGTCAATTATGCCAAAGGAATTCCATTGGTTCTTAAAGTTTTGG GTCGTCTTCTTTGTGAAAAGGGCAAGGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAAGATATCAATTGAAAAAGTT CATGAAGCAATGAGAGTAAGCTATGATGATCTTGATCGCAGAGAGAAAAATATTCTTTTAGATATTGCGTGCTTCTTCAA CGATTCGAACATGACCATGAGCTCATTAATAAGTTTATTGAAATATCATGAAAATGATAATTCGGTTGCTGTTGGTTTAG AAAGGCTTAAAGATAGAGCTCTAGTGACTATTTCTAAGGATAATTTTGTGTCCATGCATGAAATTATACAAGAAATGGGT CGGGAGATTGTTCGACAAGAATCTGAGGACCCTGGACTACGCAGTCGACTATGGGATTCCGACGACATTCGTGATGTCTT GAAAAATAACAAGGTAAGAGTCCAAATTTAGTAACATTTGTCTTTTTTATGAGAATTGTTGTTTTTAATGGTGTTTAAAT TTTATTCTATTTTCATGGCAGGGGACTGAGGCTATTAGAAGCATAATTATGTACAATTCATCAATTCAGAATTTGAAGTT AAGCCGTTACGTATTTGCTAAGATGAGCAAACTACAATTTTTGAAAATTCAAGGGGGAGGTCGTGCAAAGCGGTTGGATC TTTTTCTTCCAAGGTTTAAAGCTTGGCCACCTAATCTAAAATATTTGTTCTGGTTCGATTGCCCTCTAGGATCATTACCA ACGTGTTTTTCTGCTGAAAGTCTTGTTAGATTGGAGTTGCGAAGAGGCCGTATGCAAAGAATTTGGCACGGAGTAATGGT AATTATGTGACACTTTTCTATTTATATTTTGGATCATACAAGGAATGTTTTCAGAATATAAGACTTTGACTCTGGGTTTA GATATGTGAATGAAAGAATATTGCTCTGCATGCGGTGTAGAAGTTTTGGTTTTTCTTGAATTTTTTGATTGATTTGTTCT TTAGATGATATTATGGAATTGGAATCTATTTATGCTTTGTTTGATAGGTGTTATTAAATGCTGCCGTTTGTTCTAGGTGT TATAATTTTTTTACAAGGTCTCCAATGTAATGAATATTGTTTAAGATGTACGTACTTTGCATAATCTTACTTGCAAGGTT CTTTCTAAACATATGCTTATCTTTGATTTCTTCATTTTGTTTCAGAATTTGGTTAATTTAAAGAAAGTCTCCCTCGCTGA ATTCTCTTTCCTTGAGGAGCTGCCGGACTTTTCAAAGGCCCTAAATCTTGAGTATCTACATGTTGTGGATTGTGTGAAAT TGAAGAGTGTCCATCCATCTATTTACTCTCTTAACAAGCTTCAGAATTTCATACTAAAAGGGTGTGTGTCCCTTGCAGAA TTTACAAGTGACACCCGTTTAAGCTCCTTATGGCTTCTTGACCTTACAAGTTGTACGGGTCTAAGGAAGTTGTCAGTGTC ATTAGAGAATATAACAGACCTACATTTGAGGAGAATTCCTTCCAATGTGTTTCCTTCATCGTTTGTATGTCAAAGCAAGC TAGAACTACTCGATTTAAGAGAAACTCAATATGAGAGCTTACCTTCAAGCATCAAAAATCTTACCAGATTGCAAGAACTT TACATAAGTGATTGTGCTTTACTTCAGTCAATACCGGTGCTTCCCCCGTCCATTCAAATTCTTATTGCTAGAGGGTGCAG ATCTCTAAAGACAGTATTCTTCCCTTTAACGGCTGCCGAACAATTCAAGGAAAACAGGCAAAAGGTTTCATTCCGGAATT GCATGAACTTGGATGGACGTTCACTCAGGGATATTGAGTTGAATGCACAAATAAACTTGATGAAACTTACATATCTACAT TCATCCACACTAGAACATAAAGATGAGTCTCCCTTTCAAGCATGGTACGAGTATCCAGGGTGGAGCGGTGTTCCAAAGTG GTTGCAGTTCAAGACAAGAAATGATGAAATGATTATTGATCTATCTCCTGCTCGACTATCCCCTTTGTTGGGTTTCATTT TTTGCTTCATCCTCGTTGCAAAGGACTCATCAGAATATAGTGGGCCAATTAAGTTTGAAATCACGATAATTAATGGTGAG GGTAAAAAGGGCTATGTGATGGATTCAGATATTGCAACTGGTAATCAGTGTTTGATATACGACAAAAAATGTTCCCAATA CTTAACTGGCGCAGCAAAAAATCAGACAAGGTTTAAAATCAAGGTTGCAACACATGCAGTAAAATCCAAAATGGCTCCAA TGAAGAACTTGAAGTTAATAGAGTTTGGAGTCAGCCCTGTAAGCACCATGATTTATCAAAGGTTAACATTCAAGTCGTCA ACTTTAGTTCTTATAATTACACTTCTGATATAGAGATTTGTAAGTTCTAAATTTCAGCATACTCAAAAGGCTATTACGAG TCACGTTTGGGAGGGCCTTGATTGGGTTTTTCACTTTATCCGCATCTTTTTAATATTCAAGATGCAAATTTTTGAATGAA ATTCAAATCCAAATATGATTCAGTTCTCTTATCGTTGTTCTTCTTCTTAGGTTTGTGGAGTCTTTGGGGTTAGCGGAAAA CGAGTTGCATTGAAGGCAAATTGCAAGGGATGGCGATGTTATCTCTGTGAGATGTTATCAGGAGTTCTTAATTTTCTCTT GAAGTCCTCTGTTCAGGTTGCTAAGTTGTTGGCGTGGGAAGCGTCTGTTGTCGGAAGCTAGGTAACCCTGGTGGCATAGA TGCTTAGGAGGGATCACACTTAGAACTCTGTGGATTACTTACTTTTGATGTAGAAAGCAAAGCAATATGATTCTTTCTTC TATAAGCAGTCAGAAAAGCTTATGACGAAAAATATGATGGTAGATAAGCACTAAATATGTGATGTAATTCTACATATTTA ACTTTCTGCACTAGTGGTCTATTGTTTTGTTTTTTAGCATTTATCCCTATATCATTTTCCACACATACTCACACTAATGA TGCAACATTCACTAGTCTGATTTTACATGATGTTGCTGTCAATATTTTGTTCTACTCTTTGTGTTTCTTCTCTCTTGCTG GCAGAGGAGAACATGGACTGTTTCAAACAATTTTTATTAATAGAAGTGAAGTTCTTGTCAAAATTTTTATGGAGTTGTTA ATCTTACTATTTTTTGCTTTTAAGGTTGGCAGTGAAAATGGGCCATGGTATAAAGTTGGAGCAGGTACCGGTTTGATGAA TTCAAAGTTTAAACTCCGGGTGAAAATTATTATTTTCATGGCGATCAAAGGACAATTGCATACAACTCTAACAATTGGAG GCTGTTAAAACCCTCTTCTGGTTGTTGAATTCTCTCTGGTACAAGTGCAGAGATGGAAATTGGGCAACAAAAGAACAAGG ATGGGGAAATAATTTATATTTCTATTTGATGTCCTGCTTGCCGCCACATAAAGCCAAGTTGGTATCTTTTGAAAATGTGA CTTTGTATATTGTATTAGAAATAGCTGCTGACTGACTTAATTAGGTCCTTTGCCTCATCTCTCACAGATTGTGTTAAATG GGTAGTATGTACTTTCCTCCTTTGAGATGAGTCTTGGGTTGACAGGAGGTTTGTGTTATTGTGATGAAAATGTGAAATTC ATGGACGACTTTGAAATGTTAATTCTGTATTAACTAGAGTGGAAGAAACAGAAAAGTCTGTTGCGGTTTCACTTGGCATG GTTTACATTCATTGGTTCTACTTAAGACTTGGTATAATGGTATGTTTGACAAAATTTAGTTGTAAGACTATATGTTAGCT AAAAGCCGTTAGCTGATTCAAGTAAAAAGTGTTTCATAGCTGATTCAAGTAAAAGTGGTTGGAGTACAAGACAACAAAGG ATGACATGATTGTTGATTCCTTTGTACAGTTGAAGATGAAAAATTTGATTTAGACAAAAATGTTTATATTTCGGTGTAAG TAGAATTGTTAAGTTTTCATAATTACGCCTTAAAACACAGGCTTGTTAAGTATTTTGAATATTGAGTCACACATTATCTC TTATTATTATTGTGTTTCTTTATGTCATGAATTCCTTAAAGTTGTACAATTGGCCAGGTGAGACAAGTGCTCCCACCTTG GCTTCCCCAGCTCCATCAAACAAAACACAAAAAAAAGGAAATTATCAGATACGATTGAGGAAGGATTTGCTGATTGGATT AAATCATGTTACCTGTCCTACAAACCAGATGAGATGGCGACAATCACACAAGCCTTGCGGGCTATTTGGAAGGCACGAAA TGAGAATCTGTTCAATGGCCAACTCCAGGATCCTGCTGCTGCAATTCAAAAGACTTTGGCAAGTTTGATGGAATGGTTGG AAGCACAAGAGAAGATGCAGCAGAGAAGTGACACTAGCACTAACGTGACCTGGAAACTTCCACCAGAAAACTCATTAAAG GTGAACATAGATGCAGGGTGGACAGGAACCGAGGCTACAGGGTTTGGATTAGTGGTGCGTGATTATAATGCCAGGATGAT GTTTGCTGCTACCCTTATGGAGCCTTCTCTCTTTGATCCAGCTATGGCAGAGGCGTTAGCATTGAGATGGAACTTGAGCC TTATAGAAGAACTGGGCATGGACGATGTGATAATTGAGACAGATTCAATGATAGTCTACAAAGCTATGAGGGAGGCTCAT TGCAAGCCATACATTGAGCCAATTATTTTAGACTGCAAGTTCCTAGCTTCCATGTCCCCTAAGTTTTCCCTTAACCATGT AAAAAGAAAGGCTAATAATTCTGCCCATTCTTTAGCTGCCTTAGCAAATGATTTCCCCTCTAATGTGTGGTGGGATAATC CTCCTCGCTCAATTGCAGAGGCTATCTTTGTAGATGCATTTTCTTATGATTAATGAAAACTACGTACTGGCTTTAAAAAA AAAATAAAAAATAAAAAAATGTC
CDS sequence (LotjaGi2g1v0078100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATCTTCTTCTGGAGCTTCTCAAATAATATGTGCTGTACTGGTTGCATGTATTACTGGTTGCATACTGATGTACTT TAGAGTTAAGAAGAAAGAAATCATCAAGACAGAAATTGTCACAAAGGATGAAGTGTCAAAGTCAAGGTCAAACAACATTC CTCCAATAAAGTATGATTTATTTGTAAGCTTTCATGGAAAGGACATTCGTGACACTTTTCTTAGTCATTTGATTGAAGCT TTTGCTCGAAGAAAAATAAACGCCTTCGTAGATGATAAACTTGAGACGGGAGAAGATATATGGCTATCACTTGTTGAAGC AATTAAAGGATCGTCCATTTCATTGATCATATTCTCCGAAAATTATGCCTTTTCACATTGGTGTTTGGAAGAACTCGTGA AAATACTTGAGTGCAAAGAGAAATATGGACGGATTGTTGTTCCTATTTTCTATAATGTAGAACCTTCGAATGTAAGACAT CAAAGGGGGAGTTATGAAAATGCATTTACTGAACTTGAAAAGAGGTATGATTTTCCAAGGGTGCAAATCTGGAGACAAGC ATTGACCTCATTAGCTAATTTATCAGGAATCACTTCATTAAAATATCGGAATGATGCTGATTTGCTTGAAGAAATCATCA ATCGTGTGTTGATGAGTATGCCTAAGTATCCGGTTAACAGAAAAAGACTTATTGGAATGGAAAAACCAATTGCAGATTTG GAATCATTGCTATGGAAGGAGTCAACAAAGGCACACATCATCGGAATTTGGGGTATGGGCGGTATTGGCAAGACAACTAT TGTAGAAGAGATATTTGGCAAAAAATGTTTCGAGTATGGAGGATCTTGTTTTCTGTCAAAGGTAAAAGATAAACTACAAA AAGAAGGAATACAATCTTTGAAAGAAAAACTCTTTTCAAAACTATTAGCAGAAGATGTGAAAATTTACACCCCAAATTTA TTGCCCAGTGATATTGAAAAAAGGATTGGTCGGATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATACAGATCAGGT AGAAAATATATTTGGAACGGTTGATTGGCTTCACTCAGGTAGTAGAATAATAATAACAACTAGAGATAAGCAAGTACTTA TTTCTAACAAAGTCGATGACATATACCAAATTGGGGAATTGAGTTATAGTGAAGCACTTGAACTTTTCAATTTGAGTGCA TTTAACCAAATTCATCTTGAACAAGAGTATGATGATCTATCACAAAGGGTGGTCAATTATGCCAAAGGAATTCCATTGGT TCTTAAAGTTTTGGGTCGTCTTCTTTGTGAAAAGGGCAAGGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAAGATAT CAATTGAAAAAGTTCATGAAGCAATGAGAGTAAGCTATGATGATCTTGATCGCAGAGAGAAAAATATTCTTTTAGATATT GCGTGCTTCTTCAACGATTCGAACATGACCATGAGCTCATTAATAAGTTTATTGAAATATCATGAAAATGATAATTCGGT TGCTGTTGGTTTAGAAAGGCTTAAAGATAGAGCTCTAGTGACTATTTCTAAGGATAATTTTGTGTCCATGCATGAAATTA TACAAGAAATGGGTCGGGAGATTGTTCGACAAGAATCTGAGGACCCTGGACTACGCAGTCGACTATGGGATTCCGACGAC ATTCGTGATGTCTTGAAAAATAACAAGGGGACTGAGGCTATTAGAAGCATAATTATGTACAATTCATCAATTCAGAATTT GAAGTTAAGCCGTTACGTATTTGCTAAGATGAGCAAACTACAATTTTTGAAAATTCAAGGGGGAGGTCGTGCAAAGCGGT TGGATCTTTTTCTTCCAAGGTTTAAAGCTTGGCCACCTAATCTAAAATATTTGTTCTGGTTCGATTGCCCTCTAGGATCA TTACCAACGTGTTTTTCTGCTGAAAGTCTTGTTAGATTGGAGTTGCGAAGAGGCCGTATGCAAAGAATTTGGCACGGAGT AATGAATTTGGTTAATTTAAAGAAAGTCTCCCTCGCTGAATTCTCTTTCCTTGAGGAGCTGCCGGACTTTTCAAAGGCCC TAAATCTTGAGTATCTACATGTTGTGGATTGTGTGAAATTGAAGAGTGTCCATCCATCTATTTACTCTCTTAACAAGCTT CAGAATTTCATACTAAAAGGGTGTGTGTCCCTTGCAGAATTTACAAGTGACACCCGTTTAAGCTCCTTATGGCTTCTTGA CCTTACAAGTTGTACGGGTCTAAGGAAGTTGTCAGTGTCATTAGAGAATATAACAGACCTACATTTGAGGAGAATTCCTT CCAATGTGTTTCCTTCATCGTTTGTATGTCAAAGCAAGCTAGAACTACTCGATTTAAGAGAAACTCAATATGAGAGCTTA CCTTCAAGCATCAAAAATCTTACCAGATTGCAAGAACTTTACATAAGTGATTGTGCTTTACTTCAGTCAATACCGGTGCT TCCCCCGTCCATTCAAATTCTTATTGCTAGAGGGTGCAGATCTCTAAAGACAGTATTCTTCCCTTTAACGGCTGCCGAAC AATTCAAGGAAAACAGGCAAAAGGTTTCATTCCGGAATTGCATGAACTTGGATGGACGTTCACTCAGGGATATTGAGTTG AATGCACAAATAAACTTGATGAAACTTACATATCTACATTCATCCACACTAGAACATAAAGATGAGTCTCCCTTTCAAGC ATGGTACGAGTATCCAGGGTGGAGCGGTGTTCCAAAGTGGTTGCAGTTCAAGACAAGAAATGATGAAATGATTATTGATC TATCTCCTGCTCGACTATCCCCTTTGTTGGGTTTCATTTTTTGCTTCATCCTCGTTGCAAAGGACTCATCAGAATATAGT GGGCCAATTAAGTTTGAAATCACGATAATTAATGGTGAGGGTAAAAAGGGCTATGTGATGGATTCAGATATTGCAACTGG TAATCAGTGTTTGATATACGACAAAAAATGTTCCCAATACTTAACTGGCGCAGCAAAAAATCAGACAAGGTTTAAAATCA AGGTTGCAACACATGCAGTAAAATCCAAAATGGCTCCAATGAAGAACTTGAAGTTAATAGAGTTTGGAGTCAGCCCTGTA AGCACCATGATTTATCAAAGGTTTGTGGAGTCTTTGGGGTTAGCGGAAAACGAGTTGCATTGA
Protein sequence (LotjaGi2g1v0078100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSSSGASQIICAVLVACITGCILMYFRVKKKEIIKTEIVTKDEVSKSRSNNIPPIKYDLFVSFHGKDIRDTFLSHLIEA FARRKINAFVDDKLETGEDIWLSLVEAIKGSSISLIIFSENYAFSHWCLEELVKILECKEKYGRIVVPIFYNVEPSNVRH QRGSYENAFTELEKRYDFPRVQIWRQALTSLANLSGITSLKYRNDADLLEEIINRVLMSMPKYPVNRKRLIGMEKPIADL ESLLWKESTKAHIIGIWGMGGIGKTTIVEEIFGKKCFEYGGSCFLSKVKDKLQKEGIQSLKEKLFSKLLAEDVKIYTPNL LPSDIEKRIGRMKVLIVLDDVNDTDQVENIFGTVDWLHSGSRIIITTRDKQVLISNKVDDIYQIGELSYSEALELFNLSA FNQIHLEQEYDDLSQRVVNYAKGIPLVLKVLGRLLCEKGKEVWESQLDKLKKISIEKVHEAMRVSYDDLDRREKNILLDI ACFFNDSNMTMSSLISLLKYHENDNSVAVGLERLKDRALVTISKDNFVSMHEIIQEMGREIVRQESEDPGLRSRLWDSDD IRDVLKNNKGTEAIRSIIMYNSSIQNLKLSRYVFAKMSKLQFLKIQGGGRAKRLDLFLPRFKAWPPNLKYLFWFDCPLGS LPTCFSAESLVRLELRRGRMQRIWHGVMNLVNLKKVSLAEFSFLEELPDFSKALNLEYLHVVDCVKLKSVHPSIYSLNKL QNFILKGCVSLAEFTSDTRLSSLWLLDLTSCTGLRKLSVSLENITDLHLRRIPSNVFPSSFVCQSKLELLDLRETQYESL PSSIKNLTRLQELYISDCALLQSIPVLPPSIQILIARGCRSLKTVFFPLTAAEQFKENRQKVSFRNCMNLDGRSLRDIEL NAQINLMKLTYLHSSTLEHKDESPFQAWYEYPGWSGVPKWLQFKTRNDEMIIDLSPARLSPLLGFIFCFILVAKDSSEYS GPIKFEITIINGEGKKGYVMDSDIATGNQCLIYDKKCSQYLTGAAKNQTRFKIKVATHAVKSKMAPMKNLKLIEFGVSPV STMIYQRFVESLGLAENELH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 5 | 5 | - | – | |
Phobius | 6 | 27 | 22 | - | – | |
TMHMM | 7 | 29 | 23 | - | – | |
Phobius | 28 | 1060 | 1033 | - | – | |
SUPERFAMILY | 50 | 196 | 147 | 6.67E-36 | ||
PANTHER | 52 | 1053 | 1002 | 0.0 | – | |
PANTHER | 52 | 1053 | 1002 | 0.0 | – | |
Gene3D | 56 | 218 | 163 | 5.9E-60 | ||
ProSiteProfiles | 56 | 194 | 139 | 25.952 | ||
Pfam | 57 | 216 | 160 | 1.2E-40 | ||
SMART | 57 | 194 | 138 | 2.3E-41 | ||
Gene3D | 219 | 381 | 163 | 5.3E-27 | – | |
SUPERFAMILY | 221 | 480 | 260 | 1.32E-53 | ||
Pfam | 241 | 467 | 227 | 2.5E-28 | ||
PRINTS | 253 | 268 | 16 | 7.8E-22 | – | |
PRINTS | 328 | 342 | 15 | 7.8E-22 | – | |
Gene3D | 387 | 470 | 84 | 7.5E-8 | – | |
PRINTS | 421 | 435 | 15 | 7.8E-22 | – | |
SUPERFAMILY | 457 | 566 | 110 | 5.17E-11 | ||
Gene3D | 563 | 737 | 175 | 9.7E-19 | ||
SUPERFAMILY | 583 | 893 | 311 | 3.06E-31 | – | |
PRINTS | 738 | 754 | 17 | 7.8E-22 | – | |
Gene3D | 738 | 888 | 151 | 4.5E-15 | ||
Coils | 1052 | 1060 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0078100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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