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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0118300 |
| Transcript ID | LotjaGi2g1v0118300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7LWN7|K7LWN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0118300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43384411..43389234) extracted from Lotus japonicus Gifu genome v1.2.
GCCATGACCACAGAAATGGATTGCCATCTACGCACCTATGGTTGACCTGTGACCAGAAGCTGAGCTTGCGGCTACTGTGA GCGGCGAATGATAGTGCGATTGCTGCCTACAACGCCTATGGGTGGTTCGCGGTGAACTCCGGTAGCAGAGAGAGTGAGAT TCGAGACGTGATTCCGCCATGGAGCACCCGCTGCGGCGAACTTCCGGCAGGTCTGACGGTGACCTGATACACCCTTGCAG CGGTGGCGGATCAGAGAGGTGAAGACACCTCTCGTTGTTCTCTTGTTGTTTCCGAGTTTGAAGTTCTTGTATCATGGCAA AGCAAGCAGCACCATCCTTGTCTTCCAACTTCAAATTTCAATGGACTTACGATGTCTTCCTCAGTTTTAGAGGTGAAGAC ACCAGGTTAAATTTCACAAGTCATCTCTACCATTCTCTGCGTCGAAAGGGAATTCACACTTTCTATGATGAAGATGGGCT TAAAAGAGGGGAGGAAATTACACCAGCTCTTCTCAACGCCATTCAAGAGTCTAGAATTGCAATCATTGTTTTCTCCAAGA ATTATGCATCATCAACATTTTGTTTGGATGAACTTGTCAAGATTCTTGAGTCGTTGAATGTACACAGTCGATTGGTATGG CCAATTTTTTATGATGTCGATCCATCAGAAGTTCGGCATCAAACGGGGGTTTATGCAGAAGCCATGGTGAAACATGAGGA AAGGTTTCAGGATGACAGGGAAAAGGTACAAAAATGGAGGAAGGCTTTATGTCAAGCAGCTAATCTATCAGGCTGGCATT TCCAACTTGGGTGGGTATCCTAAACTTTGATTTTCTTTTTCTTTTTGCCTAAAGGTTTTAGTATTAATAATAAATAAAAA TATGAGATGAATGAAATTATCTAATTGAGACATTAATTTCTTTATGATTAACTTTGATTGAACTGAAACAATGTGATTTC CATATTTTTTTTATGATTGGCAGTTCTGAACCAGAATATATGTTTATTTACAATATTGTTGAAGAGGTCTCAAAAAAGAT CAATCGCACTCCTTTACATGTTGTTGATAACCCTGTTGGGCTAGACTCTGCTGTGCTAGAAGTGAGATCCCTCCTCGGAG ATGGATCTGAAGTGGTCATGGTAGGCATTTATGGATTTGGTGGAATAGGTAAAACCACAATTGCTCGTGCTGTGTATAAC TTGATTGCTGATCAATTTGAAGGTTCATGTTTTCTTGCTGATATCAGAGAATCGACAATTAGTAAGCATGGTCTTGTACA ACTCCAAGAAATGTTACTTTCTGAAATACTTGGGGAGAAAGATATCAAAGTGGGAAATGTCAATCAAGGAATTCCAATAA TAAAAAGGAGGCTTCAACAAATGAAGGTTCTTTTGGTTCTAGACGATGTTGACAAATTGGCACAGTTAAAATCACTTGCG GGAGGGTATGATTGGTTTGGCTTTGGTAGCAAGATCATTATCACAACAAGAGACAAACAGTTGCTAGCTGCTCATGGGGT AGTAAAATTGCTTGATGTTAAACCCTTATGTGATGAAATAGCTCTTGAATTGTTTAGCTGGCATGCCTTTAAAAGTAACA AAGTTGATACAAGTTGTTTGGGTATTTCTAGCCGTGCAGTTTCTTATGCATGTGGTCTTCCGTTGGCTTTGGAAGTCATA GGTTCTTACTTATTTGGGAAAAGTTTAGATGAGTGTAAGTCCGCGTTAGATAAATATGAAAGAATTCCTCATAAAGAGAT CCATGAAATTCTTAAGGTAAGCTATGATGGATTGGGAGAAGATGAGAAGGGAATTTTCCTTGACATTGCTTGTTTCTTCA ATAAATATGAAATTGACTATGTCAAACAAGTGCTCCAGGCTCGTGGATTTCATGTAGAAGATGGTATTAGAGTGTTGACA GATAGATCTCTTATTAAGATTGATGCTATTGGTGTTTTGAGAATGCATGACTTAGTTCAAGACATGGGCAGAGAAATTGT TAGGCAAGAATCAACAAACAAGCCTGGAAGACGTAGTAGATTATGGTTAGATAAGGATATCATTCATGTTTTGGAAGACA ATATGGTACGTAAGAAATTATAACCATCTCTACATGGTATTTCTTCATGTTTCATTCCTTTATGTATCATTTTTTCATGA ATATGTGCTAAATTTTGGGATTCTTAATCCTCCTTTCTCAGCTTCTTGTTTGAAAAATTATTAGTAGAAAATGTAGGATT TTGGATGAGTTAATTTTTCAAATATGTAGACGACACTGCTAACATGTACATTTTGTGTTTAAATTCTACTTTTGGCCTTG GAAGGGAACTGACAAAGTCGAATTCATAAAGTTTGATATGCACAACAACAATGAAGTGGAGTGGGGTGGAAATGCCTTCG AGAAGATGAAAAGCCTGAGAGTTCTAATTATGGAAAATGCAGCATCTTGTACAGGCCCCAAAGATCTACCAAATAGTTTG AGGGTGCTAGATTGGAGATATTATCCATCACCATCTTTACCATCTGATTTCAATCCTAAACAACTTGTGATACTCAATAT GTCTAAAAGTTGTCTTAAATTGTTCCAACCCCCCAAGGCATGTAGCAGTTTCGCAGTTTTTCATTTCAATATGAATTTAG ACCTAAGAGTTGATGATATCTTAAATCAATTTCTTTTATTTTGCAGATGTTGGAATCCTTGTCTTCAATAAATTTTGATG GTTGCGAGTTCTTAACTGAACTACCGAACCTAAGTGCAGCACCATTCCTGATGAATCTGTCCCTTGATAACTGCACAAGT TTAGTTACAATTCATGAATCTGTTGGGTTTCTTGAGAATCTCCGCTCTTTGAGCGCTAAAGGATGCACCCAGCTAAAAAT TCTTGTTCCCTGCATCAAGTTGACATCTCTTGAAATTCTGGATCTCGAGGGGTGCTCACGTCTCAAGAGATTCCCAGAAG TATTAGAAAAGATGGAGAAAATAATAGAAATTAATTTAGACGCCACTGCCATAGGAAAATTGCCATTTTCCATTGGAAAT CTTGTTGGGCTTGAACGATTATCCCTCAAGGGATGCAGAGGCCTTAATCAGCTACCGGGTAGTATCTATATATTGCCAAA AGTTGAAGTGTTAATGGGTAATGGGCATGGAGGATTTTGTGTTTTTATAGGGCATGGAGAGAAAGAAAAGATGAGCTCAG AAGTATCTTCAGATGTCATGGTTGTTTATCATGAAGCTGAAGCCAGATATGTCCTTGATGTGTATTATCCGCACATGAGC CCTGATAATGTGATTCAAGTATGCAGTCCTGATCCCCAAGTGTATCATGAGTTTAACTTGTTGTTCACTAAGCTTGCATA TCACAGGGACTTGAACTCTAGATGCAAGAAAACATCAACATGTTTCTCATTCCGAAAGAAATTCCCCAAGATAGCTCTGT GTTGTCATGTAGTTCCCCATGTGAAAAGTCTCGTGCTTTTGGAATTCATGTTCAGTGTACTTGTCAATGGCAGGAAACAA TTTGACTCTGCATGCACCTATGTAACTAATGGTCTATGGTGGCAAACATTTTGGTGTGATTTAAAATGCGAAGTTGAGGG GGCATTTTCAGAGAATAAATGGAATCATGTTGAGATTTTATGTGAGGCGAAATACCCCAGACCAAGTTCTGAATTGGCAA TGGCCACAGAAACTTGGGTTGGAACTGGACTTTCATTAAGCTGGACCCTTGTTGGTATCTACAAGGAAGGAAACAACAAG GAAGATATTAAATTTGAAAATGGTGTGTCGCAGTTTCCATCTGCCATTAGAAAACCAGTGTATCCACTTCTACCTTCCTG CTTCTACTCATCACCACCACTGTATCCTCCTTTACCTTGCTGCTTCTATTACACTGTTGTGCAGAATGAAGTAACAGATA AATAGGGTCTGCAAACTATTATAGTTTATTTAACCATTTTATTGTAATAACAATGAGTATCATTGTAAAATATTTGCTGA ATTACAAGGGGGTAACTTTTTGTTGCCTTCTTAAAATATTTGTTGTGAAATTTTTATGTATGTCAGCCAAGGAAGCAAAT TCATTCTTACATTATCAAAATAGGTTTCGATAAGGAAGTAGCCATATGCAACTCTTTGCTAACCAGGTGCACAAAGTTCT CAAATCTAAATGGTGCATTCAGTGTTCTCATATCTGGGTGTTCTCAGTGCATGAAGCCACATTGGATTTGGTGGAGGAAG GCTGGAACTTTTATAATATATTCCATGGAAGAGGAACTAGGGATTCCACTAACAAGAGAGAGCACTTCTCTTGCATGGCT GATTTGCTTGCTCTTGTTGGATGCTTGTATGAAGCAGAGGCTTTTATTAAGAACACAGGATTTGACCTTGAAAACTCTAT TTTCTTCTTGTAAAACATCCGGTTGGTCTTGATTATCTGCGGTACCCTTTTCGTTACAGTTATGCTCTCTTAATTCCGTC TGATACATTGTTGCGTATGATGTGGCAACATATTGCACAATCCAAATTAGAAAACTTAATGGGATCAGAGCGGTTCTCCA TGATTCATGAAATTCATATTAAAGGCAATCCAACATAATGGGAAGAAGAGGATAACCTTGTACAGGGATTTCGAATACAG GCATTGGAGCATGTATCTCATGTGACATTGTGTTTGATAGACTACCAAATTATGGTTGAGCAGTTTATAGTACAGTTAAA GTTACCTTCAATATGTATCTGACAAATTGTCTAGAACACAAGGTGGGAAAAAATTATATTGGTTATGAACTCCAAATATT TGGATCCAGCTCTGTGGGTTAGAG
CDS sequence (LotjaGi2g1v0118300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAGCAAGCAGCACCATCCTTGTCTTCCAACTTCAAATTTCAATGGACTTACGATGTCTTCCTCAGTTTTAGAGG TGAAGACACCAGGTTAAATTTCACAAGTCATCTCTACCATTCTCTGCGTCGAAAGGGAATTCACACTTTCTATGATGAAG ATGGGCTTAAAAGAGGGGAGGAAATTACACCAGCTCTTCTCAACGCCATTCAAGAGTCTAGAATTGCAATCATTGTTTTC TCCAAGAATTATGCATCATCAACATTTTGTTTGGATGAACTTGTCAAGATTCTTGAGTCGTTGAATGTACACAGTCGATT GGTATGGCCAATTTTTTATGATGTCGATCCATCAGAAGTTCGGCATCAAACGGGGGTTTATGCAGAAGCCATGGTGAAAC ATGAGGAAAGGTTTCAGGATGACAGGGAAAAGGTACAAAAATGGAGGAAGGCTTTATGTCAAGCAGCTAATCTATCAGGC TGGCATTTCCAACTTGGTTCTGAACCAGAATATATGTTTATTTACAATATTGTTGAAGAGGTCTCAAAAAAGATCAATCG CACTCCTTTACATGTTGTTGATAACCCTGTTGGGCTAGACTCTGCTGTGCTAGAAGTGAGATCCCTCCTCGGAGATGGAT CTGAAGTGGTCATGGTAGGCATTTATGGATTTGGTGGAATAGGTAAAACCACAATTGCTCGTGCTGTGTATAACTTGATT GCTGATCAATTTGAAGGTTCATGTTTTCTTGCTGATATCAGAGAATCGACAATTAGTAAGCATGGTCTTGTACAACTCCA AGAAATGTTACTTTCTGAAATACTTGGGGAGAAAGATATCAAAGTGGGAAATGTCAATCAAGGAATTCCAATAATAAAAA GGAGGCTTCAACAAATGAAGGTTCTTTTGGTTCTAGACGATGTTGACAAATTGGCACAGTTAAAATCACTTGCGGGAGGG TATGATTGGTTTGGCTTTGGTAGCAAGATCATTATCACAACAAGAGACAAACAGTTGCTAGCTGCTCATGGGGTAGTAAA ATTGCTTGATGTTAAACCCTTATGTGATGAAATAGCTCTTGAATTGTTTAGCTGGCATGCCTTTAAAAGTAACAAAGTTG ATACAAGTTGTTTGGGTATTTCTAGCCGTGCAGTTTCTTATGCATGTGGTCTTCCGTTGGCTTTGGAAGTCATAGGTTCT TACTTATTTGGGAAAAGTTTAGATGAGTGTAAGTCCGCGTTAGATAAATATGAAAGAATTCCTCATAAAGAGATCCATGA AATTCTTAAGGTAAGCTATGATGGATTGGGAGAAGATGAGAAGGGAATTTTCCTTGACATTGCTTGTTTCTTCAATAAAT ATGAAATTGACTATGTCAAACAAGTGCTCCAGGCTCGTGGATTTCATGTAGAAGATGGTATTAGAGTGTTGACAGATAGA TCTCTTATTAAGATTGATGCTATTGGTGTTTTGAGAATGCATGACTTAGTTCAAGACATGGGCAGAGAAATTGTTAGGCA AGAATCAACAAACAAGCCTGGAAGACGTAGTAGATTATGGTTAGATAAGGATATCATTCATGTTTTGGAAGACAATATGG GAACTGACAAAGTCGAATTCATAAAGTTTGATATGCACAACAACAATGAAGTGGAGTGGGGTGGAAATGCCTTCGAGAAG ATGAAAAGCCTGAGAGTTCTAATTATGGAAAATGCAGCATCTTGTACAGGCCCCAAAGATCTACCAAATAGTTTGAGGGT GCTAGATTGGAGATATTATCCATCACCATCTTTACCATCTGATTTCAATCCTAAACAACTTGTGATACTCAATATGTCTA AAAGTTGTCTTAAATTGTTCCAACCCCCCAAGATGTTGGAATCCTTGTCTTCAATAAATTTTGATGGTTGCGAGTTCTTA ACTGAACTACCGAACCTAAGTGCAGCACCATTCCTGATGAATCTGTCCCTTGATAACTGCACAAGTTTAGTTACAATTCA TGAATCTGTTGGGTTTCTTGAGAATCTCCGCTCTTTGAGCGCTAAAGGATGCACCCAGCTAAAAATTCTTGTTCCCTGCA TCAAGTTGACATCTCTTGAAATTCTGGATCTCGAGGGGTGCTCACGTCTCAAGAGATTCCCAGAAGTATTAGAAAAGATG GAGAAAATAATAGAAATTAATTTAGACGCCACTGCCATAGGAAAATTGCCATTTTCCATTGGAAATCTTGTTGGGCTTGA ACGATTATCCCTCAAGGGATGCAGAGGCCTTAATCAGCTACCGGGTAGTATCTATATATTGCCAAAAGTTGAAGTGTTAA TGGGTAATGGGCATGGAGGATTTTGTGTTTTTATAGGGCATGGAGAGAAAGAAAAGATGAGCTCAGAAGTATCTTCAGAT GTCATGGTTGTTTATCATGAAGCTGAAGCCAGATATGTCCTTGATGTGTATTATCCGCACATGAGCCCTGATAATGTGAT TCAAGTATGCAGTCCTGATCCCCAAGTGTATCATGAGTTTAACTTGTTGTTCACTAAGCTTGCATATCACAGGGACTTGA ACTCTAGATGCAAGAAAACATCAACATGTTTCTCATTCCGAAAGAAATTCCCCAAGATAGCTCTGTGTTGTCATGTAGTT CCCCATGTGAAAAGTCTCGTGCTTTTGGAATTCATGTTCAGTGTACTTGTCAATGGCAGGAAACAATTTGACTCTGCATG CACCTATGTAACTAATGGTCTATGGTGGCAAACATTTTGGTGTGATTTAAAATGCGAAGTTGAGGGGGCATTTTCAGAGA ATAAATGGAATCATGTTGAGATTTTATGTGAGGCGAAATACCCCAGACCAAGTTCTGAATTGGCAATGGCCACAGAAACT TGGGTTGGAACTGGACTTTCATTAAGCTGGACCCTTGTTGGTATCTACAAGGAAGGAAACAACAAGGAAGATATTAAATT TGAAAATGGTGTGTCGCAGTTTCCATCTGCCATTAGAAAACCAGTGTATCCACTTCTACCTTCCTGCTTCTACTCATCAC CACCACTGTATCCTCCTTTACCTTGCTGCTTCTATTACACTGTTGTGCAGAATGAAGTAACAGATAAATAG
Protein sequence (LotjaGi2g1v0118300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKQAAPSLSSNFKFQWTYDVFLSFRGEDTRLNFTSHLYHSLRRKGIHTFYDEDGLKRGEEITPALLNAIQESRIAIIVF SKNYASSTFCLDELVKILESLNVHSRLVWPIFYDVDPSEVRHQTGVYAEAMVKHEERFQDDREKVQKWRKALCQAANLSG WHFQLGSEPEYMFIYNIVEEVSKKINRTPLHVVDNPVGLDSAVLEVRSLLGDGSEVVMVGIYGFGGIGKTTIARAVYNLI ADQFEGSCFLADIRESTISKHGLVQLQEMLLSEILGEKDIKVGNVNQGIPIIKRRLQQMKVLLVLDDVDKLAQLKSLAGG YDWFGFGSKIIITTRDKQLLAAHGVVKLLDVKPLCDEIALELFSWHAFKSNKVDTSCLGISSRAVSYACGLPLALEVIGS YLFGKSLDECKSALDKYERIPHKEIHEILKVSYDGLGEDEKGIFLDIACFFNKYEIDYVKQVLQARGFHVEDGIRVLTDR SLIKIDAIGVLRMHDLVQDMGREIVRQESTNKPGRRSRLWLDKDIIHVLEDNMGTDKVEFIKFDMHNNNEVEWGGNAFEK MKSLRVLIMENAASCTGPKDLPNSLRVLDWRYYPSPSLPSDFNPKQLVILNMSKSCLKLFQPPKMLESLSSINFDGCEFL TELPNLSAAPFLMNLSLDNCTSLVTIHESVGFLENLRSLSAKGCTQLKILVPCIKLTSLEILDLEGCSRLKRFPEVLEKM EKIIEINLDATAIGKLPFSIGNLVGLERLSLKGCRGLNQLPGSIYILPKVEVLMGNGHGGFCVFIGHGEKEKMSSEVSSD VMVVYHEAEARYVLDVYYPHMSPDNVIQVCSPDPQVYHEFNLLFTKLAYHRDLNSRCKKTSTCFSFRKKFPKIALCCHVV PHVKSLVLLEFMFSVLVNGRKQFDSACTYVTNGLWWQTFWCDLKCEVEGAFSENKWNHVEILCEAKYPRPSSELAMATET WVGTGLSLSWTLVGIYKEGNNKEDIKFENGVSQFPSAIRKPVYPLLPSCFYSSPPLYPPLPCCFYYTVVQNEVTDK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 10 | 161 | 152 | 5.89E-43 | ||
| PANTHER | 13 | 770 | 758 | 4.0E-277 | – | |
| PANTHER | 13 | 770 | 758 | 4.0E-277 | – | |
| Gene3D | 14 | 188 | 175 | 2.8E-70 | ||
| ProSiteProfiles | 17 | 158 | 142 | 29.754 | ||
| SMART | 18 | 158 | 141 | 6.4E-47 | ||
| Pfam | 19 | 188 | 170 | 1.6E-43 | ||
| SUPERFAMILY | 184 | 447 | 264 | 6.4E-59 | ||
| Gene3D | 189 | 348 | 160 | 2.1E-29 | – | |
| Pfam | 209 | 425 | 217 | 4.6E-22 | ||
| PRINTS | 218 | 233 | 16 | 3.7E-24 | – | |
| PRINTS | 295 | 309 | 15 | 3.7E-24 | – | |
| PRINTS | 388 | 402 | 15 | 3.7E-24 | – | |
| SUPERFAMILY | 423 | 530 | 108 | 5.17E-20 | ||
| Gene3D | 540 | 692 | 153 | 6.0E-17 | ||
| SUPERFAMILY | 541 | 774 | 234 | 2.72E-31 | – | |
| Gene3D | 693 | 778 | 86 | 2.6E-13 | ||
| PRINTS | 694 | 710 | 17 | 3.7E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0118300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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