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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0131100 |
| Transcript ID | LotjaGi2g1v0131100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IQ97|G7IQ97_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi2g1v0131100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:47547649..47551806) extracted from Lotus japonicus Gifu genome v1.2.
ACCTCTTGCTGTTGACTCAGTTCTCACCATTGACAGACTTTGGAGTTTCTTTGATAACTTGTCGTTCTCTTTGGTTCCTA TCATCATTTTCAAGTTCTTGCATGTACCGCAGTTACTGAAGTTATCATGATGTCTTCCTTCACTTGTGATTGGACTTATG ATGTCTTCCTCAATTTTAGAGGGGAAGATACCCGGAATAACTTCACTGGTAGTCTCTACAACTCTTTGGATCAAAAAGGA ATCCACACCTTCTTGGATGATGAAGAGCTTAGAAAAGGGGAAGAAATCAGGCCAGCTCTTGTCAAAGCCATCATAGAATC TAGGACTGCCATCATGGTGTTCTCTGAAAACTATGCAGAGTCCACATTTTGTTTGGATGAACTTGTCACGATCCTTGAGC ACTTAAAAGCACAAGGTCGATTAGTTTGGCCAATCTTTTATGATGTTGATCCGTCAAAAGTCCGGCATCAGACTGGGAGT TATGCACAAGCTTTGGCAAAACATGAGGAAAGGTTCAAATATGACAAGGGCAAGGTTCAGAAATGGAGGAAGGCTTTATA TGAAGCAGCTAACCTAAGTGGCTGGCACTTCAAACAGGGGTAATTCACATCATCCTTTTATTATATATGTATTATGTCGT TTCATTACCTTTATTTTTATTCTCTGCCTTGTAATTTCCATATCAATATTCAAGGAAAAAGAAATAATACATGAAAAATG AATAAACATGAGAGATGATGAGTTACCATTCAGAAAGCATATAAGCACGAGTTTATGATTGAAGCAAATGAAATAAACAT AACTATAATGCATTACTTTCTCTTAACATCATCTTTAACAATGTGCAGGTCTCAATCTGAATATAAATTTATTATAAGCA TCGTTGATATGGTCTCCAAAAATCTCAATCACAGTCCTTTACATGTTGCTGATAACCCAGTTGGGCTAGAGTCTCCAGTG CTACAAGTGGAATCGCTTCTTCAGCTTGTGTCTTATGAGTGTGACAACATGGTAGGGATTTGTGGGATCGGTGGAATAGG TAAAACCACAATTGCTCGTGCTGTGTATAACAAGATTGCAGATCAATTTGATGGCTTGTGCTTTCTTGCCGATATTAGAG AAAAAGCAATTAATAACCATGGCCTTAAACAACTCCAAGAAACACTACTTTCTGATATTCTTGGAGAAGATGTTAAAATT AGAGACATCAATCATGGAATTCCACTGATAAAAAGGAAGCTCGGAAGAAAGAAGATTCTTTTGATTCTTGATGACGTGGA CAAACTCAAGCAATTAAAGGCAGTTGCTGGGGGATATGATTGGTTTGGCAAAGGCAGCCGAATCATTATTACATCTAGAG ACAAGCATTTGTTAGCTACTCATGGAGTGGCGCAGTTTTATGAGGTTAAAGAGTTAAACCAGAAACAAGCTCTTGAATTG TTCAGCTGGAATGCCTTCAAAAGTAACAAAGTTGATCCTAGTTATGAACATATTTTAGACCGTTTCCTTTCTTATGCCAG GGGCCTTCCTTTGGCTTTGGAAGTATTAGGTTCTAACTTGTATAGTAAAGGAGTTGATGAATGGAATTCTGCATTGGATA AATATAAACAAGTTCCTAATAGAGAGATTCATGAAATGCTGAAAATAAGTTATGATGGTTTGGAGGAAGATGAGAAGAAA GTTTTCCTTGACATTGCTTGTTACTTCAATAAATACAAAATATCATATGTCAAAGAAATTCTACATGTCCGTGGTTTTCA TCCCAATTACAGTATTGGAGTTTTAATTGACAGATCTCTGATGAAGATTGATGAGTTGGGTTGTGTAAGAATGCATGATT TGATTAAGGACATGGGTAGAGAAATTGTTAAACAGGAATCATCTGAGCCTGGCGAACGTAGTAGGTTGTGGTTTGATGAG GACATCATTCATGTTTTGCAAGAAAATACAGTAAGTCTGCAATCATTCAACATGTTTTTTAATTTCTATAATCCATTACT TTCCTATTTAAAATTTCAATGAATAAGTTCAAGTTGACATGATTCTTAGACCTGCTTGTTTATAGCAATATGTTTACACA ATTACTTGGCAGCAAGGCGTATAGTTTGTCAATTTCTTACTTACGCTTCGTGTTTGAAGGGAACCAATAAAATTGAAGTC ATAATTTTGTACTCACACGAAGAGAAAAGAGTGCATTGGAATGGAAAAGCATTCAAGAAGATGAGAAATCTCAGGGTTCT TATTGTTGGAGATGCACACTTTTCTATTGCTCCCAAACATCTTCCCAATAGTTTACGAGTGCTAGACTGGAGTGGATATC CATCACCCTCTTTACCCTTTGATTTTCATCCCAAGGAACTCCTCATTCTCAGTTTGCCAAATAGCTGTCTTATATTGGAC AAACCAATCAAGGCATGTATTTGTTTTTCTTGTTACTTTAATGTGTTTGTTATCCCTTTATTCTTTATATGTTAATATAC CCCAAAGAAATTGTGATACCAATGCCTATGTTATTGTTTTGCAGATGTTTGACTCTCTGAGTTTCATGGATTTTGAAGAA TGTAAATTCTTAAGACAAGTACCAGACCTTTCTGGAGTCCCAAAATTAAGGGCATTGTGCGTTGATAACTGCATAAATTT AATTGAAATCCATGATTCAGTTGGATTTCTTGATCAACTAATTCTGTTGAGTGCTCAAGGGTGCATCCAGCTTCATACTT TTGGACGTGCCATCAGGTTGCCATCTCTTGAGACTCTTGATCTTAGGTGGTGCACATGTCTTCAGAGATTTCCAGAAGTA GAAGGAATTATGGAAAATATTCGAGATGTTTATTTGGACCATACTGCCATACAAGAATTGCCATTTTCAATTCAAAATCT GATTGGGCTTGAACGACTGTACCTGCGCAGTTGTCAAAATCTCAAGCAGCTTCCAAGTATCATTCGATCGTTGCCTAAAC TTGAGGTGATAACTAATCATGGACAAAGAGGGTGGAAATCATTTGAACCCATTAGAGGTCAAGAAGAAGTAAAATCAAAA GTGTTCCCACTTCCCCGTCTATGGCGCGGGAATTACATTACCAATGTGTATTATATATGTGTAAGCAGTGAAAATGTTAT CCAAGGATATTTTGCACAGGTCAAAATTTGTCGGCCTATGGCATTGCCCCAACCACACAGGAGACCATCGGGTTCGTTTT GGTTTCGTAAAAGATTTCCTGCAGTCACTCTAATTTTTGAAGGGAAGCCTGACTTTCTTATGCACATTGAAGGAGCAGTG ATAGATTTCAGGATTTGGGTGTTCCTCTATGGCTTTGACCAGTTTTCTTTTTCATCTACTTGTATAATTCCTGCAGCAAA GGTAACAATCACAGAACCTCTACATCTACTTGTTGATGTGAGGAATCTTCAATACAAATTTGAGCAAGGTGTTCGTGAAA AAGTATTTTCAGAGCATGAATGGTACCATGTTATGCTTTCCCACGAACTAAAATGCCACATGTATGATCATAAGCGTGTA CCTTTAGGCCAAAACACAACCATAACAGTGACCATTCCACTCAAAAGCATTGATCCAGATACCTACACAGATGACATCAT TTTCGGAAATCCAGGTCTTGGAATTGGAGCTAGACCACTTTTGACATGGCCCGATCAGCAAATAGGGGCTGGACCATTTA TTAGTCCAATTTATAATTCAAGTCAAGCTGCGGTAAGTCCCAAGAAAAATTTAGTCAAACCAAAATGGATGCTGAGTTTA GCAGTAGAAACCGGAACTGAGTTTAGCAGTAGCAGTAGAAAAGATGAAGAAATAAATGCATGGGAAAGTGAAGGAGAATG AAGAGGAGAAAGGGAAAGTGTATGGTGTGGAAGTGAGGAAGGAAAGTGAAGGAGAGTGAAGAGGGAGTGAGGGGGTGAGA GTTAAATTGGTTGGGTGGTCAGTGGCGTGTTAAATTTAACACCTTTTTATTTAAGTATTCTTACTGTTTAGTTATTTCCA TCGTTCTTGAATATTCCTTTTATTAAACTGATGCGACTTTCAGGGCTAATTAGTTACTAGATAAATTGTAATGTGTGAAA ATGAAAAGGTACTCAGAAAATTAAGATTTGGTCTTCAATTTCTTTTGACATGACGTTATGATCAGCTTCAACATAGCA
CDS sequence (LotjaGi2g1v0131100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCTTCCTTCACTTGTGATTGGACTTATGATGTCTTCCTCAATTTTAGAGGGGAAGATACCCGGAATAACTTCAC TGGTAGTCTCTACAACTCTTTGGATCAAAAAGGAATCCACACCTTCTTGGATGATGAAGAGCTTAGAAAAGGGGAAGAAA TCAGGCCAGCTCTTGTCAAAGCCATCATAGAATCTAGGACTGCCATCATGGTGTTCTCTGAAAACTATGCAGAGTCCACA TTTTGTTTGGATGAACTTGTCACGATCCTTGAGCACTTAAAAGCACAAGGTCGATTAGTTTGGCCAATCTTTTATGATGT TGATCCGTCAAAAGTCCGGCATCAGACTGGGAGTTATGCACAAGCTTTGGCAAAACATGAGGAAAGGTTCAAATATGACA AGGGCAAGGTTCAGAAATGGAGGAAGGCTTTATATGAAGCAGCTAACCTAAGTGGCTGGCACTTCAAACAGGGGTCTCAA TCTGAATATAAATTTATTATAAGCATCGTTGATATGGTCTCCAAAAATCTCAATCACAGTCCTTTACATGTTGCTGATAA CCCAGTTGGGCTAGAGTCTCCAGTGCTACAAGTGGAATCGCTTCTTCAGCTTGTGTCTTATGAGTGTGACAACATGGTAG GGATTTGTGGGATCGGTGGAATAGGTAAAACCACAATTGCTCGTGCTGTGTATAACAAGATTGCAGATCAATTTGATGGC TTGTGCTTTCTTGCCGATATTAGAGAAAAAGCAATTAATAACCATGGCCTTAAACAACTCCAAGAAACACTACTTTCTGA TATTCTTGGAGAAGATGTTAAAATTAGAGACATCAATCATGGAATTCCACTGATAAAAAGGAAGCTCGGAAGAAAGAAGA TTCTTTTGATTCTTGATGACGTGGACAAACTCAAGCAATTAAAGGCAGTTGCTGGGGGATATGATTGGTTTGGCAAAGGC AGCCGAATCATTATTACATCTAGAGACAAGCATTTGTTAGCTACTCATGGAGTGGCGCAGTTTTATGAGGTTAAAGAGTT AAACCAGAAACAAGCTCTTGAATTGTTCAGCTGGAATGCCTTCAAAAGTAACAAAGTTGATCCTAGTTATGAACATATTT TAGACCGTTTCCTTTCTTATGCCAGGGGCCTTCCTTTGGCTTTGGAAGTATTAGGTTCTAACTTGTATAGTAAAGGAGTT GATGAATGGAATTCTGCATTGGATAAATATAAACAAGTTCCTAATAGAGAGATTCATGAAATGCTGAAAATAAGTTATGA TGGTTTGGAGGAAGATGAGAAGAAAGTTTTCCTTGACATTGCTTGTTACTTCAATAAATACAAAATATCATATGTCAAAG AAATTCTACATGTCCGTGGTTTTCATCCCAATTACAGTATTGGAGTTTTAATTGACAGATCTCTGATGAAGATTGATGAG TTGGGTTGTGTAAGAATGCATGATTTGATTAAGGACATGGGTAGAGAAATTGTTAAACAGGAATCATCTGAGCCTGGCGA ACGTAGTAGGTTGTGGTTTGATGAGGACATCATTCATGTTTTGCAAGAAAATACAGGAACCAATAAAATTGAAGTCATAA TTTTGTACTCACACGAAGAGAAAAGAGTGCATTGGAATGGAAAAGCATTCAAGAAGATGAGAAATCTCAGGGTTCTTATT GTTGGAGATGCACACTTTTCTATTGCTCCCAAACATCTTCCCAATAGTTTACGAGTGCTAGACTGGAGTGGATATCCATC ACCCTCTTTACCCTTTGATTTTCATCCCAAGGAACTCCTCATTCTCAGTTTGCCAAATAGCTGTCTTATATTGGACAAAC CAATCAAGATGTTTGACTCTCTGAGTTTCATGGATTTTGAAGAATGTAAATTCTTAAGACAAGTACCAGACCTTTCTGGA GTCCCAAAATTAAGGGCATTGTGCGTTGATAACTGCATAAATTTAATTGAAATCCATGATTCAGTTGGATTTCTTGATCA ACTAATTCTGTTGAGTGCTCAAGGGTGCATCCAGCTTCATACTTTTGGACGTGCCATCAGGTTGCCATCTCTTGAGACTC TTGATCTTAGGTGGTGCACATGTCTTCAGAGATTTCCAGAAGTAGAAGGAATTATGGAAAATATTCGAGATGTTTATTTG GACCATACTGCCATACAAGAATTGCCATTTTCAATTCAAAATCTGATTGGGCTTGAACGACTGTACCTGCGCAGTTGTCA AAATCTCAAGCAGCTTCCAAGTATCATTCGATCGTTGCCTAAACTTGAGGTGATAACTAATCATGGACAAAGAGGGTGGA AATCATTTGAACCCATTAGAGGTCAAGAAGAAGTAAAATCAAAAGTGTTCCCACTTCCCCGTCTATGGCGCGGGAATTAC ATTACCAATGTGTATTATATATGTGTAAGCAGTGAAAATGTTATCCAAGGATATTTTGCACAGGTCAAAATTTGTCGGCC TATGGCATTGCCCCAACCACACAGGAGACCATCGGGTTCGTTTTGGTTTCGTAAAAGATTTCCTGCAGTCACTCTAATTT TTGAAGGGAAGCCTGACTTTCTTATGCACATTGAAGGAGCAGTGATAGATTTCAGGATTTGGGTGTTCCTCTATGGCTTT GACCAGTTTTCTTTTTCATCTACTTGTATAATTCCTGCAGCAAAGGTAACAATCACAGAACCTCTACATCTACTTGTTGA TGTGAGGAATCTTCAATACAAATTTGAGCAAGGTGTTCGTGAAAAAGTATTTTCAGAGCATGAATGGTACCATGTTATGC TTTCCCACGAACTAAAATGCCACATGTATGATCATAAGCGTGTACCTTTAGGCCAAAACACAACCATAACAGTGACCATT CCACTCAAAAGCATTGATCCAGATACCTACACAGATGACATCATTTTCGGAAATCCAGGTCTTGGAATTGGAGCTAGACC ACTTTTGACATGGCCCGATCAGCAAATAGGGGCTGGACCATTTATTAGTCCAATTTATAATTCAAGTCAAGCTGCGGTAA GTCCCAAGAAAAATTTAGTCAAACCAAAATGGATGCTGAGTTTAGCAGTAGAAACCGGAACTGAGTTTAGCAGTAGCAGT AGAAAAGATGAAGAAATAAATGCATGGGAAAGTGAAGGAGAATGA
Protein sequence (LotjaGi2g1v0131100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSSFTCDWTYDVFLNFRGEDTRNNFTGSLYNSLDQKGIHTFLDDEELRKGEEIRPALVKAIIESRTAIMVFSENYAEST FCLDELVTILEHLKAQGRLVWPIFYDVDPSKVRHQTGSYAQALAKHEERFKYDKGKVQKWRKALYEAANLSGWHFKQGSQ SEYKFIISIVDMVSKNLNHSPLHVADNPVGLESPVLQVESLLQLVSYECDNMVGICGIGGIGKTTIARAVYNKIADQFDG LCFLADIREKAINNHGLKQLQETLLSDILGEDVKIRDINHGIPLIKRKLGRKKILLILDDVDKLKQLKAVAGGYDWFGKG SRIIITSRDKHLLATHGVAQFYEVKELNQKQALELFSWNAFKSNKVDPSYEHILDRFLSYARGLPLALEVLGSNLYSKGV DEWNSALDKYKQVPNREIHEMLKISYDGLEEDEKKVFLDIACYFNKYKISYVKEILHVRGFHPNYSIGVLIDRSLMKIDE LGCVRMHDLIKDMGREIVKQESSEPGERSRLWFDEDIIHVLQENTGTNKIEVIILYSHEEKRVHWNGKAFKKMRNLRVLI VGDAHFSIAPKHLPNSLRVLDWSGYPSPSLPFDFHPKELLILSLPNSCLILDKPIKMFDSLSFMDFEECKFLRQVPDLSG VPKLRALCVDNCINLIEIHDSVGFLDQLILLSAQGCIQLHTFGRAIRLPSLETLDLRWCTCLQRFPEVEGIMENIRDVYL DHTAIQELPFSIQNLIGLERLYLRSCQNLKQLPSIIRSLPKLEVITNHGQRGWKSFEPIRGQEEVKSKVFPLPRLWRGNY ITNVYYICVSSENVIQGYFAQVKICRPMALPQPHRRPSGSFWFRKRFPAVTLIFEGKPDFLMHIEGAVIDFRIWVFLYGF DQFSFSSTCIIPAAKVTITEPLHLLVDVRNLQYKFEQGVREKVFSEHEWYHVMLSHELKCHMYDHKRVPLGQNTTITVTI PLKSIDPDTYTDDIIFGNPGLGIGARPLLTWPDQQIGAGPFISPIYNSSQAAVSPKKNLVKPKWMLSLAVETGTEFSSSS RKDEEINAWESEGE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 3 | 153 | 151 | 1.44E-41 | ||
| Gene3D | 5 | 180 | 176 | 2.6E-67 | ||
| PANTHER | 7 | 761 | 755 | 2.7E-280 | – | |
| PANTHER | 7 | 761 | 755 | 2.7E-280 | – | |
| ProSiteProfiles | 9 | 150 | 142 | 29.12 | ||
| SMART | 10 | 150 | 141 | 1.0E-42 | ||
| Pfam | 11 | 181 | 171 | 1.1E-42 | ||
| SUPERFAMILY | 174 | 440 | 267 | 2.96E-63 | ||
| Gene3D | 181 | 340 | 160 | 6.5E-29 | – | |
| Pfam | 206 | 416 | 211 | 4.6E-27 | ||
| SMART | 209 | 347 | 139 | 0.0069 | ||
| PRINTS | 212 | 227 | 16 | 2.2E-23 | – | |
| PRINTS | 288 | 302 | 15 | 2.2E-23 | – | |
| PRINTS | 381 | 395 | 15 | 2.2E-23 | – | |
| SUPERFAMILY | 417 | 522 | 106 | 1.06E-19 | ||
| SUPERFAMILY | 535 | 770 | 236 | 2.04E-30 | – | |
| Gene3D | 543 | 684 | 142 | 2.6E-13 | ||
| Gene3D | 685 | 774 | 90 | 5.0E-16 | ||
| PRINTS | 686 | 702 | 17 | 2.2E-23 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0131100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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