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LotjaGi2g1v0135200.1

Overview

Field Value
Gene ID LotjaGi2g1v0135200
Transcript ID LotjaGi2g1v0135200.1
Lotus japonicus genome version Gifu v1.2
Description Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|K7MHV7|K7MHV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0135200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:49390095..49394382) extracted from Lotus japonicus Gifu genome v1.2.

TGGGGAGTTACATTCTCAAAGTTTTACTTGCAATGATTGTGTTGTTTTTGCATACTGAAGTATCTGTTGTTGGGTTCGAC CGGCCAACAAAGAATAAGAGCTCATATGTGAAGTGCCATGAGAGTGAGAAAATATCACTCCTCAACTTCAAACATGGTCT CCTGGATTACTTTGGCATGCTGCCTACGTGGAGTGATGATGAAGATAACAGAGATTGTTGCCTGTGGAGAGGAATTACAT GCAACAATGAAACTGGTCATGTTTTGAAGCTTGATCTTCATGCTGATTGGGATTCACAATATTTGTCAACAAGTAAAATC AATATCACTTCATTGATTGAGTTGCGAAATTTGGAATATTTGGATCTCAGTTATAATGATTTCAGTGGTAGTCCAGTTCC AAAAAACATTGGATTGTTCGCCAACTTAAGAGGTCTCAATTTGTCAACTTGTGATTTTGATGGGAGGATTCCTTCTGAAA TGGGAAATCTCTCAAAGCTGGAGTATCTTGATTTAAGTAAAAATGGTGATATTGATGGGGAAATTCCTTACCAACTTGGA AATCTCTCACAGCTCAAATCTCTTAATCTGGCCGCAACTTCACTTTCTAGAGTGATCCCTTTTCATATTGGGAATCTTCC CATGTTGAATACTCTCAAGCTTGAGGGAAGTTTTGATGATGAATCAGCAGAGTGGCTATCTTCTCTCTTTTATTTAGAAA ATCTTGACCTGAAATCATTTTCTAATCTTGGCTCCTCCAGTCACATGTTGCAAAAAATGAGTAAGCTGATTCCAAATTTA AGAGAGTTGAGGCTAGTTGGTTTTGGTCTTCTAGATAATGGCATTCCATCTTTGTTTCATTCTAATGCCAACTTTTCCAC TTCTCTTACCATTCTTGATCTCTCTCAGAATATGCTGACATCATCAACTCTTCAATTCTTGTCAAACTATAGCCTTAATC TTCAGGAGCTTTATGTTTCTCACAATAATATTGTTATTGCATCCCCTCTCTACTCTCCACACTTTCCTTCTCTTGTTAAG CTCGATCTCTCCTATAATAATCTAAGCTCATCAATATTTGAAGGTATTTTCAACTTCAGCTCAAAACTGCAAGAACTTGA TCTAGGAAATTGCTATCTCATGGATAGAAGTTTTCATCTGTCCACTGCTTCCTTTGTGAGCTCTTCATCTTCTCTGGCCA TCCTTGATCTATCCTCCAACCTCTTGAAATCTTCTATATTTCATTGGCTTTTTAACTTCACCACCAATGTACGTAGCCTC AACCTTGATGGTAACTTGATAGAAGGTCCGATTCCAGATGAATTTGGGAAAGTATTGAACTCTCTTGAAATTCTTGTTCT CAGTAATAACAAAGTGCAAGGGCAGATTCCAATTTCCTTTGGGAATATATGTACACTCCAAGAATTACACCTTGGCCATA ACAACTTCAGTGGTGAAATTTCAAACTTCATTCAAAACTCTACTTTGTGCAACAGACATAAATTTCATAGTTTCTCATCT TTAAGGATATTGGACCTTTCCAATAACAAGTTCACGGGTGAAATCCCTGAAAGCATTGGATTGTTGTATGAGTTGGAGTC TCTGCACCTGGAGCAGAATCACATCAAGGGCAATATCATGGAATCACATTTCAATAATTTGTTCAAGTTGGTAAAATTGG ACTTAACAGACAACCCATTGTCTCTGAAGTTTGATGCTAGTTGGGTTCCACCTTTTCAATTATTAAAATTAGGATTAGCA TCTTGTAAGCTGGGTCCTAATTTCCCAAGTTGGCTCCAGAATCAAGGTCACTTATGGTTTCTTGACATTTCTAATGCTGG GATTAATGATTCTGTACCAGATTGGTTTTGGAGCAAATTGCAATCAATAAATCAGATGAACATGTCTCACAATGGTCTCA AAGGTACAATTCCGAACTTACCATTCAAGCTTGTCAATGATGATGATGTTGCTAATTATGATGATGTGTTTTTAGTTTTG AATTCAAACAAGTTTGAAGGTAGAATTCCTGCTTTTTTGTGGCAAGTATTTACACTGGATCTCTCCAACAATAAGATTTC AGATTTGAATACATTCTTGTGTGGGAAAAGTGCAAATACAAATATGAGAACTTTAGATTTGTCAAATAATCAAATAGCGG GACAAATGCCTGATTGTTGGGAACATCTGAACTCATTAGAATTTCTTGATTTAAGTGATAATCAATTGTCAGGGAAGATT CCAAAGTCCATGGGCACCCTTGCTAATTTGAAAGCTTTGGTTTTACGAAATAACAGTTTAAGTGGAGAACTCCCATCCAC TTTGAGGAACTGCACCAATTTGGTTATGCTAGATGTGGGTGAAAATTTGTTGTCTGGTCCAATACCCAAATGGATTGGAG AAAGTCTACCACAATTGAAAATCTTGAGTCTGCGAGTAAATAACTTCTTTGGAAGTTTTCCTTCATATCTTTGTTATTTG AGACAGATTCATCTCTTGGACCTATCAAGGAACAACTTATCCAAATGCATTCCATCATGTCTGCAGAATTTTACTGCAAT GGTTGAAAAGAGTACGATCTCAAGTGAAATTGCAAGGGGAAGAAAAATGTCATCTGACTTGTTTTATTTGGATACTTACA ACTCCAACGTGTTATTGATGTGGAAAAGAGCAGAGTTGGTGTTTTGGGATCCAGATTTTCTAAGAAGCATTGATCTCTCA AGCAACAATTTCACAGGTGAAATACCAAAAGAGGTTGAATATTTGGTTGGATTAGTTTCTTTGAATTTATCAAGAAACAA CCTGAGTGGAGAAATCCTTTTTGAGATTGGAAATTTAACATCTCTTGATTTTCTTGACTTGTCAAGAAATCGTTTACATG GCAAAATTCCTTCATCTCTTTCTCAAATCGATCGTCTAGCAATATTAGACCTGTCACACAACTCCCTCTCAGGAAGAATC CCTTCTGGAAGACAGTTGCAGACCTTTGATGCCTCAGCTTTTGAAGGAAATCTTGATCTTTGTGGAGAACCACTTAACAA AACTTGTCCAAGTGATGAGACCAAAGTAAATCCTCAAGGACTAGCAGATGATGATGGTGATAATTCAGTTTTCTATGAAG CATTGTACATGAGCTTGGGCATAGGATTCTTCACAGGATTTTGGGGCTTGATTGGGCCAATACTCATATGGAGACCTTGG AGAATTTCTTACCTGAGGCTCTTGAACAGATTGATAGACTATGTATATGTCATGGTTGCAGTGAAGGTGGCAAAGTGGCA CAGGTGGCTAAAAGGATAGCAGGTATGCTATTTTACGAACTTCTTTAATTTGCTCCACGTTCATAGTGCTTTTTCATCTG TCCCAGTTAACATGTTTAATTAATTTGGAGAACTTCTTTAAGGATAGCAGGTATGCTATTTCTCGAAATATTATTTTCTG TTTATGAAGAAATTACAGTTAACATGTTTAATTAATTTGGAGAAGTTTTGTTCTCATATGACTTCTCCAAAATGTGCTTG CATTAGTATACATACTTCTATGTACTCCAATAGTTAGATTCATGTCAATTTGTTTATCACAGAATTCTTGCCCCTATATA CACTAATTTGTTAGATACTCCTGATTTTTTTCGACTGTATAGTTTCAACTCCTTATGACTCTCTCTCACACGTACACACA CACTGCAACTATTGGCTTTTGTCAATTTCTCAACCATGTTAAGTCACTTAAGCTTAATTAGAGTGTATCTTCTTTTTTCC TTGGTTCATCTTCTTTTTTCTTTGTCTAATGTTTAGACCTGTTAAAATGTGCTTGCACTTGTATCTTTTCCGTACTCCAA TGGGTAGCTACATGTCAATTTGTTTATCAGTACTGAAGTTTTTTTTTCCTGCATCACGTGTCAGTATTCTGAATTGTACC ATGAAATTTGCAGTTTTGTTTTTCTTTTGCAGATTATTAGCTACACATTTCTGATGTGGGATGAAAGAATAATGGGTTGC TGGAAAGTTTAAGATACTCTTTAGTAGATCACATGTTTGAAATAATGACTTGTAGTGTCACTGTTGCAAGAAACTTATTG GCTTGAATGTCCTTTATTATGTAACATTTGTCATGTATTTTATTTTCTTCTTAAGCTAAGACTATATATCTAAAATGTAA CATTTTAATTCCATCTTGAATAATGTTTCGTGTTAGTTACTTGCTACATGCAGAAAAATTTACCCCAAATTTGCCTGCAA CTGCAAGTATGTTAGCATTCCTTGAGTAATTGCTATTTTCATGTATAT 

CDS sequence (LotjaGi2g1v0135200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTGTGTTGTTTTTGCATACTGAAGTATCTGTTGTTGGGTTCGACCGGCCAACAAAGAATAAGAGCTCATATGTGAA GTGCCATGAGAGTGAGAAAATATCACTCCTCAACTTCAAACATGGTCTCCTGGATTACTTTGGCATGCTGCCTACGTGGA GTGATGATGAAGATAACAGAGATTGTTGCCTGTGGAGAGGAATTACATGCAACAATGAAACTGGTCATGTTTTGAAGCTT GATCTTCATGCTGATTGGGATTCACAATATTTGTCAACAAGTAAAATCAATATCACTTCATTGATTGAGTTGCGAAATTT GGAATATTTGGATCTCAGTTATAATGATTTCAGTGGTAGTCCAGTTCCAAAAAACATTGGATTGTTCGCCAACTTAAGAG GTCTCAATTTGTCAACTTGTGATTTTGATGGGAGGATTCCTTCTGAAATGGGAAATCTCTCAAAGCTGGAGTATCTTGAT TTAAGTAAAAATGGTGATATTGATGGGGAAATTCCTTACCAACTTGGAAATCTCTCACAGCTCAAATCTCTTAATCTGGC CGCAACTTCACTTTCTAGAGTGATCCCTTTTCATATTGGGAATCTTCCCATGTTGAATACTCTCAAGCTTGAGGGAAGTT TTGATGATGAATCAGCAGAGTGGCTATCTTCTCTCTTTTATTTAGAAAATCTTGACCTGAAATCATTTTCTAATCTTGGC TCCTCCAGTCACATGTTGCAAAAAATGAGTAAGCTGATTCCAAATTTAAGAGAGTTGAGGCTAGTTGGTTTTGGTCTTCT AGATAATGGCATTCCATCTTTGTTTCATTCTAATGCCAACTTTTCCACTTCTCTTACCATTCTTGATCTCTCTCAGAATA TGCTGACATCATCAACTCTTCAATTCTTGTCAAACTATAGCCTTAATCTTCAGGAGCTTTATGTTTCTCACAATAATATT GTTATTGCATCCCCTCTCTACTCTCCACACTTTCCTTCTCTTGTTAAGCTCGATCTCTCCTATAATAATCTAAGCTCATC AATATTTGAAGGTATTTTCAACTTCAGCTCAAAACTGCAAGAACTTGATCTAGGAAATTGCTATCTCATGGATAGAAGTT TTCATCTGTCCACTGCTTCCTTTGTGAGCTCTTCATCTTCTCTGGCCATCCTTGATCTATCCTCCAACCTCTTGAAATCT TCTATATTTCATTGGCTTTTTAACTTCACCACCAATGTACGTAGCCTCAACCTTGATGGTAACTTGATAGAAGGTCCGAT TCCAGATGAATTTGGGAAAGTATTGAACTCTCTTGAAATTCTTGTTCTCAGTAATAACAAAGTGCAAGGGCAGATTCCAA TTTCCTTTGGGAATATATGTACACTCCAAGAATTACACCTTGGCCATAACAACTTCAGTGGTGAAATTTCAAACTTCATT CAAAACTCTACTTTGTGCAACAGACATAAATTTCATAGTTTCTCATCTTTAAGGATATTGGACCTTTCCAATAACAAGTT CACGGGTGAAATCCCTGAAAGCATTGGATTGTTGTATGAGTTGGAGTCTCTGCACCTGGAGCAGAATCACATCAAGGGCA ATATCATGGAATCACATTTCAATAATTTGTTCAAGTTGGTAAAATTGGACTTAACAGACAACCCATTGTCTCTGAAGTTT GATGCTAGTTGGGTTCCACCTTTTCAATTATTAAAATTAGGATTAGCATCTTGTAAGCTGGGTCCTAATTTCCCAAGTTG GCTCCAGAATCAAGGTCACTTATGGTTTCTTGACATTTCTAATGCTGGGATTAATGATTCTGTACCAGATTGGTTTTGGA GCAAATTGCAATCAATAAATCAGATGAACATGTCTCACAATGGTCTCAAAGGTACAATTCCGAACTTACCATTCAAGCTT GTCAATGATGATGATGTTGCTAATTATGATGATGTGTTTTTAGTTTTGAATTCAAACAAGTTTGAAGGTAGAATTCCTGC TTTTTTGTGGCAAGTATTTACACTGGATCTCTCCAACAATAAGATTTCAGATTTGAATACATTCTTGTGTGGGAAAAGTG CAAATACAAATATGAGAACTTTAGATTTGTCAAATAATCAAATAGCGGGACAAATGCCTGATTGTTGGGAACATCTGAAC TCATTAGAATTTCTTGATTTAAGTGATAATCAATTGTCAGGGAAGATTCCAAAGTCCATGGGCACCCTTGCTAATTTGAA AGCTTTGGTTTTACGAAATAACAGTTTAAGTGGAGAACTCCCATCCACTTTGAGGAACTGCACCAATTTGGTTATGCTAG ATGTGGGTGAAAATTTGTTGTCTGGTCCAATACCCAAATGGATTGGAGAAAGTCTACCACAATTGAAAATCTTGAGTCTG CGAGTAAATAACTTCTTTGGAAGTTTTCCTTCATATCTTTGTTATTTGAGACAGATTCATCTCTTGGACCTATCAAGGAA CAACTTATCCAAATGCATTCCATCATGTCTGCAGAATTTTACTGCAATGGTTGAAAAGAGTACGATCTCAAGTGAAATTG CAAGGGGAAGAAAAATGTCATCTGACTTGTTTTATTTGGATACTTACAACTCCAACGTGTTATTGATGTGGAAAAGAGCA GAGTTGGTGTTTTGGGATCCAGATTTTCTAAGAAGCATTGATCTCTCAAGCAACAATTTCACAGGTGAAATACCAAAAGA GGTTGAATATTTGGTTGGATTAGTTTCTTTGAATTTATCAAGAAACAACCTGAGTGGAGAAATCCTTTTTGAGATTGGAA ATTTAACATCTCTTGATTTTCTTGACTTGTCAAGAAATCGTTTACATGGCAAAATTCCTTCATCTCTTTCTCAAATCGAT CGTCTAGCAATATTAGACCTGTCACACAACTCCCTCTCAGGAAGAATCCCTTCTGGAAGACAGTTGCAGACCTTTGATGC CTCAGCTTTTGAAGGAAATCTTGATCTTTGTGGAGAACCACTTAACAAAACTTGTCCAAGTGATGAGACCAAAGTAAATC CTCAAGGACTAGCAGATGATGATGGTGATAATTCAGTTTTCTATGAAGCATTGTACATGAGCTTGGGCATAGGATTCTTC ACAGGATTTTGGGGCTTGATTGGGCCAATACTCATATGGAGACCTTGGAGAATTTCTTACCTGAGGCTCTTGAACAGATT GATAGACTATGTATATGTCATGGTTGCAGTGAAGGTGGCAAAGTGGCACAGGTGGCTAAAAGGATAG 

Protein sequence (LotjaGi2g1v0135200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIVLFLHTEVSVVGFDRPTKNKSSYVKCHESEKISLLNFKHGLLDYFGMLPTWSDDEDNRDCCLWRGITCNNETGHVLKL DLHADWDSQYLSTSKINITSLIELRNLEYLDLSYNDFSGSPVPKNIGLFANLRGLNLSTCDFDGRIPSEMGNLSKLEYLD LSKNGDIDGEIPYQLGNLSQLKSLNLAATSLSRVIPFHIGNLPMLNTLKLEGSFDDESAEWLSSLFYLENLDLKSFSNLG SSSHMLQKMSKLIPNLRELRLVGFGLLDNGIPSLFHSNANFSTSLTILDLSQNMLTSSTLQFLSNYSLNLQELYVSHNNI VIASPLYSPHFPSLVKLDLSYNNLSSSIFEGIFNFSSKLQELDLGNCYLMDRSFHLSTASFVSSSSSLAILDLSSNLLKS SIFHWLFNFTTNVRSLNLDGNLIEGPIPDEFGKVLNSLEILVLSNNKVQGQIPISFGNICTLQELHLGHNNFSGEISNFI QNSTLCNRHKFHSFSSLRILDLSNNKFTGEIPESIGLLYELESLHLEQNHIKGNIMESHFNNLFKLVKLDLTDNPLSLKF DASWVPPFQLLKLGLASCKLGPNFPSWLQNQGHLWFLDISNAGINDSVPDWFWSKLQSINQMNMSHNGLKGTIPNLPFKL VNDDDVANYDDVFLVLNSNKFEGRIPAFLWQVFTLDLSNNKISDLNTFLCGKSANTNMRTLDLSNNQIAGQMPDCWEHLN SLEFLDLSDNQLSGKIPKSMGTLANLKALVLRNNSLSGELPSTLRNCTNLVMLDVGENLLSGPIPKWIGESLPQLKILSL RVNNFFGSFPSYLCYLRQIHLLDLSRNNLSKCIPSCLQNFTAMVEKSTISSEIARGRKMSSDLFYLDTYNSNVLLMWKRA ELVFWDPDFLRSIDLSSNNFTGEIPKEVEYLVGLVSLNLSRNNLSGEILFEIGNLTSLDFLDLSRNRLHGKIPSSLSQID RLAILDLSHNSLSGRIPSGRQLQTFDASAFEGNLDLCGEPLNKTCPSDETKVNPQGLADDDGDNSVFYEALYMSLGIGFF TGFWGLIGPILIWRPWRISYLRLLNRLIDYVYVMVAVKVAKWHRWLKG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 1029 1029 -
PANTHER 23 164 142 7.0E-180
Gene3D 23 196 174 6.2E-42
PANTHER 23 164 142 7.0E-180
Pfam 30 71 42 5.2E-7
SUPERFAMILY 60 403 344 7.14E-41
SMART 104 124 21 620.0
SMART 104 131 28 19.0
Pfam 105 119 15 0.93
ProSiteProfiles 106 127 22 5.787
SMART 153 180 28 410.0
ProSiteProfiles 155 174 20 5.325
PANTHER 156 370 215 7.0E-180
PANTHER 156 370 215 7.0E-180
Gene3D 210 373 164 8.0E-17
SMART 282 305 24 160.0
SMART 283 305 23 330.0
ProSiteProfiles 284 304 21 7.227
SMART 307 328 22 210.0
Pfam 309 369 61 1.3E-6
ProSiteProfiles 309 330 22 6.033
SUPERFAMILY 331 635 305 1.33E-42
SMART 331 355 25 23.0
SMART 331 354 24 510.0
ProSiteProfiles 333 356 24 5.871
Gene3D 374 488 115 3.0E-22
PANTHER 386 480 95 7.0E-180
PANTHER 386 480 95 7.0E-180
ProSiteProfiles 387 407 21 5.209
Pfam 412 472 61 1.0E-6
ProSiteProfiles 412 433 22 5.063
SMART 435 458 24 280.0
ProSiteProfiles 437 458 22 5.163
ProSiteProfiles 461 483 23 5.856
Gene3D 489 642 154 1.1E-28
PANTHER 493 557 65 7.0E-180
PANTHER 493 557 65 7.0E-180
SMART 494 518 25 27.0
ProSiteProfiles 496 518 23 7.681
Pfam 496 515 20 0.31
ProSiteProfiles 520 542 23 5.517
ProSiteProfiles 545 565 21 4.878
PANTHER 582 1064 483 7.0E-180
PANTHER 582 1064 483 7.0E-180
ProSiteProfiles 618 640 23 5.04
Gene3D 646 1008 363 5.8E-101
SUPERFAMILY 648 1000 353 2.81E-59
SMART 669 690 22 140.0
SMART 669 687 19 500.0
ProSiteProfiles 671 692 22 6.642
Pfam 674 732 59 1.5E-7
SMART 695 721 27 55.0
SMART 696 718 23 170.0
ProSiteProfiles 697 719 23 5.756
SMART 719 743 25 24.0
ProSiteProfiles 721 743 23 6.796
PRINTS 722 735 14 1.8E-5
ProSiteProfiles 745 768 24 5.332
ProSiteProfiles 794 816 23 4.616
SMART 816 839 24 200.0
ProSiteProfiles 818 839 22 5.04
ProSiteProfiles 889 911 23 5.51
ProSiteProfiles 913 936 24 5.048
SMART 935 958 24 170.0
PRINTS 935 948 14 1.8E-5
SMART 935 959 25 38.0
ProSiteProfiles 937 959 23 6.287
ProSiteProfiles 961 983 23 6.588
Phobius 1030 1053 24 -
TMHMM 1031 1053 23 -
Phobius 1054 1088 35 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0135200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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