Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0189700 |
| Transcript ID | LotjaGi2g1v0189700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing family protein; TAIR: AT1G12700.1 RNA processing FACTOR; Swiss-Prot: sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial; TrEMBL-Plants: tr|A0A1J7IP46|A0A1J7IP46_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0189700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62000352..62009103) extracted from Lotus japonicus Gifu genome v1.2.
GTCGTTTTTGCTGGTCTCACCATCTCAAATGCTCAACACGCCGTCCCTCCCTACCCTGGTTTGTAAAACGAATGGAGCAT GTTGCCGTCGTTCGGAGCAGCGCGTCACCGAAACATGAACACCATACTCCGCCATAGTCAAACCCGTTGCATCCCCACCT TCCTCACCCTTCTCCTCTATTCCCCTCGTCCAATCTCCACCTCCACCACCACCACCACCCCCGCCGCCGCAGTTTCCTCA TTCCACCGCATGCTCAACTCGCACCCTCCCCCACGCATCCTCGAGTTCAACAAGCTCCTAACCACCCTCGTCAAATCAAA GCATTACCCCACCGCCATCTCACTCTGTTCCAAAATGGAGCTCAGAGGAATCACCCCTTGTGTCATCACCCTCACCATCT TGATCACGTGCTTCTGTCACGTGGGTCGCGTGGCCCTCGCGTTCTCCGTGCTCGGGAAGATTCTCAAACGGGGGTATTAT CCATTTGATGCTGTGACCTTGAACGCGCTCATCAAAGGGATTTGTGTGAGTTGTGGGGTTTTGAGAGCGGTGAAGGTTCA TGATGAACTGTTTTCGAAAGGGTTTCGGTTCAATGAGGTTACTTATGGGATTTTGATTGATGGGTTCTGTGAAGCGGGGC GAATAAGGGAAGCTATTGCGGTTCTGAGGGCAATAGAGACATGGGGTAGGGATGATTTAAGGCCTAATGTTGTTATGTAT AGCACCATTATTAATGGTTTGTGTAGAGATGGGTTTGTGAATGCGGCATGGGATTTGTATCGTGAAATGGTTGCGAACAA GGTTTCTCCGAATGGTTTCACTTATGGGTCTTTGATTCATGGGTTGTGTGGTGCGGGGCGGCTGGAAGAAGCTATTGAAT TGCTGGATGAGATGTTGCGGGAGGGCATACGCGTAAGTGTTCATATCGTCACTGTTTTGGTTGATGCATTGTGTAAAAAC GGGAGGGTGCTTGACGCACGGTATCTGTTTGATGAAATGATTCAAAGAGGTTATGAACCTAACATTGTTACTTTCACCGC TTTGATGCGCGGGTATTGTTTAAATAATGACGTGGATGAGGCAAGAAAGCTGTTTGATAAGGCTGTTCGGTGGGGTATTG TGCCTGATGTTCAGATTTTTACCGTCTTGATCGATGGATATTGCAAGGTTGAAAGATTAGGTGATGTGAAGAATCTCTTA TGCGAAATGTACCGCAGGAACTTGGTTCCGAACCTTGTGACTTGGAATTCTCTGATTAATTGCTTTTGCAAATTGGAAGG AGTCTTGAGTGCTCGGGAGGTTCTTAAGGAAATGAATGCTAGAGGTCTGTCCCCTGATATTTTCACTTATACTACCTTAT TAGATGCTTTATGCAAAAGCAAACATCTTGATACGGCGATAACATTATTCAACCAACTGATTAAAAGGGGTTTCTCACCT GATGTTTGGAGTTACACCATCATGATTAATGGATATTGCAAGAGTGAAAGGATAGATGATGCCATGAATCTTTACAAAAA AATGCTTCAAAAACATTTGGTTCCTCATATTGTAACTTACACTTCTCTCATTGATGGCTTGTGCAGATCTGGGGGAATCT CAGCTGCGTGGGAGCTTCTCAATAAGATGCACCATAATGGTCTGCCCCCTGATAATATCACGTACAGTATCTTGTTAGAT GCTTTATGCAAAAGTGAACGTCTTGAACAGGCAATTTCATTGTTTAACCAAATGATCGAAAGGGGTTTGGCACCTGATGT TCGGAGTTATACCATCATGATTCATGGATATTGCAAGAGTGAAAGGATAGATGAAGCCATGAATCTTTTCAACGAAATGC TTCAAAAAAAATTGGTTCCTGATACAGTAACTTACATTTGTCTTGTTGATGGCTTGTGCAAATCTGGGAGAATCCCATAT GCACGGCACCTTGTTAATGTGATGTATAACGATCGTCCACCCCCTGATGTTATCAATCACCTAGACGCACATCACACCAG TCATTACCTTGTTTCAGCGCATTGTTGAGGCTGACAGAGGAACTGCACTTAGCACCAGTCATTATGAGTATAGATAACTG TGCTTGCTGACAGTTTGTATGAAGTTGGAAACTGCATGTGATTTTCCAAACATCTTTTGATTAAAGGATGTTGTCCTGTC CAGAAGTCCAAAAATTTGCCACCATTATCAACGGAGTCTGACAATAGAGATTGTTTTGATCAAGCAGTGGACCGGCTTTA AAAGGTCGGGAATAAAACGGTTGCTTCTGAAAGGGTATAACTTTTGGATAAAGTAAATCTTGCTATTCTGAAAATCAAAA CAAGACTGAAAAGTGGAGAAACTTCTTCATGAAGTTGTTGTCAGAGGTCATGTAAGATGATAAAATGAGGTCAGTTTCTT TAGTTTTCATTTCAATTCTACTTATTTATGTTGGATTTGTTTGAATGTTTCGCAAATGTTTCTTTCCTTGGGTCAGATAA ATTGGACCACAATGGTCTGACTATTATAGATGTGTGCTATTGACTTTTAGACTTTTAGTTGTTGCCAGTGGTTAACTTTG TAAATTTTGACATGACATTGATCTGTCTTCATTTGTTATGTATCACTCTTATACCTATGATTAATGTTTCTGCAATCAGA ATAGAATGTAAATAACCTTTGTGTATCCTATAATTAAGTAATTAACCTATTTAATAATTCAACTAACCAAGTGGAGTTTA TTTTGCTTTTTTGTCTATTTTTTTCCAGCATATTTAATTTTTTCTTTACGTACTAGTTACTACCACTAAACTGGTTAAAA CAGATGATTTTTATTGCAGTGGGCTGAACCTCATTAACCTGGACATTTACCACCCGGCCGGATTCCACTCTTCAGTGCTG ACTGGCTATGGAGCCTAAGACTCTCTTACGGTGCTAGAAGCTGAAAAACACAGTTAGATGAGGTGAAAAATCTGTTATTT TAGCTTTTAAACCCAATTCTTGTTTAATGTTTATGAAAAGAATAGGGGTCCATTTTGCAGGCACTCACCATGAAGCCATT GAATAACTCATCAAAGCAGCTCATGTTGACAAGGGCTACCTAGTCTTTCCCTACCACCCCAATTCCAAATTTCTTGCAAA ATCACAAGCTATTAATTATGCTCTATTCTACTCAAGTCCACAGGTAACGTTAAGTTAGCATTGGACTCCAACCTTAATAG GTTCTTTTATCTGTTTAGTTTCCTTTTGTGATTTATCTCTGAAGATATTTATTCTCACTTTTACTGAAAGTGGCTAACAC TATATACTAGTCAGTTGGTGTAGATTAAAGCAGTGACGGATCCAAAAAATTAAAGTTGTATGAATGCATCCGTCACAATA TGAATGCATCCGCCCCTGGATTCAAGGGTGAAATTTTTTGTTAAATAATAGTTATGGGAAACAGGCATCAATTTTTTTTT CTAAAATTCCATGTTGGCAAGAATAGAGTGTCATTACTATAGCATGTACTTTCTAGTGAAAACTTGACTTTTCTTTCTTT AGCCTCTTCTTAATCTTTTAATATTACCTCCATTTCATATTAATTGTAGAAGAAATAAAAAACTGTTTATATATATGTCC ACTTAGAATTTCAAGAGAGCATTAATTGATGTTTTTCCAAATAATGCCCTTATGAGAAGAATAAATGAGAAGAGATAAAA CACATTTGAAACGGTAAAATAGGAAAACAAATAATATTTTCTGAAAGTTAACAAAATTAGTTGCATTTCTTAATATGTGT GGTATTTTTCTTTCTCTTAATATGAAACAAAGGTAAATAGTATGTTTGAATTTGTACATCGCTGCTTTATTTTGGAAAAA GAGCTTACAGTGCTTTATGTGTATTAATTACAGCTTGAGCCTCATGTTCAGGAGAAAGGACTGGGAAAGTTTCTAATGCG ACTTTATTAAGCTTACGTCTCAAAAGGTGCTACATTGTTTTTCTCATCTTCCTCTCTGTCATTGATGAAAATAGAGAATT GGTGCAAAAGGGCACAGCTTGTAATCAGGGAAAAGACTCTGTACTGTTGAACGTTACAATCTTTTAAGTTTATAAATGAT TAGTTTATAGTCTTCTTTTTTGAAAATTATTATTCTTGACAAGCATATGAATTTTTTGTGCATCGAGTACGGTTTCTGAT CTAATTTTTGTTTGTTTTAATATCTGTTGTAGAAGAGCTGCATTGGTGCTTGCTATCATGCTAGCTGTTCAAAAGGAAAA CTTACCAGATATGAATTTCAACATTAGTAAGCTGAGGTAATATTTTCAATCATGTATGTCATCATTGAAATATTATCCAT TTATCCTATATAAAGACTACATATCAAGTTTGATAAGAATGAAATAGAATTTTTTTTTCCTATGACCCCTTGCTCCTGTT AGCCTTATTAATTGTGTTTCAACCTCAAGGCATTGCGTAAATATATTTCTGTCTGCTTTTGGGCAGGCATACCTGAGGTA AAACAAGACCGATATTTCTACTTCCTAGTCTTATTGCATATTGGCTTTCTGATACAGGTCGTCTGGAGGGAAATTTTTTT TTGTCAATAAATCTTGATGGAATGTGTAACCGAATGCATTAATATATATTAAAAAAGGATTAAACTTAAGTACAGTACTA TAGTTGCTGTTATTACTGTTCTCCAATGAAAAATTGACACATGTTAATTTATTCCTAGTCACTAACTCCGTTGACGTTAA AAGAAATCCTTGTTCCTGTTTGCCCAAAAAAACATCCCCATCATGTTATCGACTCTGATTCTTCTCCCCTCTATCAAATC CCCCACCTGCACCCCTCAATTACTCACGTTCGTCTGCACCCTTTTAACTTCGCTTCATCAATTTTGTGTTTTCTTTTGAG AGAGAAAGAGAGAGAGAGGGAGAGAAGAGGATTAATGGGATGCAAGTGTTCTGCTTGTGCGCCAGGTTCAAGGGTTTCGT GGTGTCTTCTGGTGCGACGGTGGTGGAGGAAACCATAGCCGTCAGCGGTGGCTTTTATTCACCGGGGCGATGGTGGCGGA GGTCGACTTTCTAACGGCATGAGCGACGGTGGTGTGCATCGAAGATTCATGGGCGTGGGCAGAGGAGATGATGATGAAGA CCGAGGGAGAGAATCGATTTGTTTCGCAGGTGCTTCCAACCAGGTCCTTGGTGTTCACGATCTGTATCGGCAATGGAGTA TAAGATTGTTCCAGAACTGATTTTTTTTTTCCTTTGCAGATATGGAGGAAAAACTATGGTGCATTGGAGGAGAGGGAGAC AGAGTGAGCAGTTAACTGAGAGTTAACGGAGGTAGTGAGAGTAAAATAACCCACATGTCATACTCTCATTGGAGAACAGT AGTAACAGCACTTATAGTACTGTACTCAAGTTTTACCCATTAAAAAAACTGAAAAAAACGAGCCGAAAGCCAGAACTTGA TATATTTTTTCAAGGAGAGGGTCAGTCACTCATTCTAAGTTTTAAGATCTACATACATATAGTAGACTGCTATATAAGGG TATGTTTTCTCATGTAATGACATGCTTATTTGCGCAAATCCTGGACTTATCAATCACTTATATGATTTTAATTTCTAAAT ATATAGTGATAATCTTTGTTAGCTTGTTTGCTATCATGATTAAACATTTTTTTTTTGAAATGGCTTTCATGATTAAACAT AAAGTAGGAACAATGTGGTCATTACAGTGCTTCCTATATCTATTAGTAAAAAGTTAAGGATATTTGCAGGTCATGCCACT GTTTTGAAGAGTGGTTATATAGGTAAGAGTTTATCCCTGTCCTAGCTATAGAACCAATGCAGTTAGAGTTAGCTCAAGGT CTGTTAGAGCCAGTTAGTTAGTTGGGCGGGTAACTGTCTCCTATGTGCAATCCTATGTGGTGGATGCGATTAGAGATAAC TCAAGTCTGTTAGAGTCAGTTAGTTACTTGGGCGGGTAACCGTCTCCTATGTGCAATCCTACGCGGTGGTTAAATTGAAA TGCTAGTGTGAGAAAGCCTTTACAAACAAGTAGCTAGTAGCTACAATGAACTCCTATATCAGGATCAATTTTATTTATGA TATTAAACACAGGGATATTGAATAAATGCAGAATTACTTGTAATGTCTTTGCTTTTGAATCACCAATGAGGGGGTATGCT TCCTCCCAAAAAAAACAACGAGCATATCTTTGTTTGGCTTCCCTATTCGTTCTCTCGTAAAAAGTAAAGGAGAAATACTA ATGCTGATCCAGATTGTCAAACTAATCACGTTCACGGAATTCTGCTACCATATGCTTGCCTAAAACCTCGTTTGAAAATA GCACCACGGGAACTCAAATCTCTTGGATGAAATGCCTCTTGTAACATTTTGAATCATCTACAATTTGCTGCTACCTTGAT GTCAGCTTTGAACATTGCTCGTACAGGTCTATGATCCGAAAGCTTTGACTCACTCCTGCAGTATTGTGTTTGCTTCATTC CCTTTCCAAACCATATTATTCGATCACACCTGCAGTACCTTCTTGTGGTTAGAGTATCCCCTACTTGCTAATGGCTCATA TGTAAACATTTGAAGTTGGATTTTTTATCATCTGTTTTCCTTAAAGATAATAACATTTCTAGTAGAGTATCCCCTACTTG CACAAGTAATGATTTTTCCATGTCTCCTTACCATGCAGGGGCACGTCTCTTTTTGCTCATGTGTTGCTGGTCACAACCTA TGTAATCTTTAGAGTTCGGGTGGTACTTGTATGTAGGTGGAAACTCTATCGCTCCTTCATGCCAACCTCGGAATACATGG CCTTCCGTGAGCTCCTTCTTTAGCTATATATAATTTGCAAAGTATTATACCTTGAACTCCGAAAAATATGGTAACTAACT AATTAAACCAAAACTATTGCAATGCAAACCTGGTCTTGTTTCAACAAGGTTTCCCACTCTCTTCTCTTGATCAATGACTG TGTTTCAGAGTCTGGCATATAGATCCTGTAGTTCAAGTCGCCTAGCCAGACAACTCGGCTGCATGTGACAGATACCCATT TCAGATGGAGTTCTATTGTATGTATTCAACTTGTGTAGTGTTTTATATAGTCGTAGTTTCCAATTATGCACAATTGAATA CACTTACTCATGGTCAATAATTTTTCGAGGCATGTCATGCAGAGTATCAGTAGAGAATCTTGTCCGCGACAAAATATCAG TTGCGTTAACGTTTCTCTGTCTTCGGTCTTCTTCTTTACCACCAGAAGCTAGATGACTGCATATAAAGCAGAAGCTTGTT TCATGCAAGCAAAATCTAATTGATATTGAACCCTGTATTTTAAAGATAAACAGAATGTTTAAAAATTCATTTACAATTTC AAAACTATCTGAATTCGCCGTTTAAAAAATAAACTGAAAATATGCGTTTGCACTTCTCTATAATGTGTGAAAACTTACCT TGTTTCCCAAACAACCCATGATTCCACAGCCAACAGATGAGACACTCAAGTGTCGGATAGATTGTAAGAGGTAAGACTGA ACCCAAATGGTAATGAACACTCCCACCATTTGCTTGCTTCTGATGCACTGGAAATCTTGTTCATGCTCACCCTCTGCACA AATTTGTTTCTGCAGAGGGTATATCTTATGAGGTTCTGCTATTTTATCTTCTTCAACTCCCTTTATTGGTCTTCTATTGT TAAGGGCTGCCCCAATAAGAGAATTCCATTTCCTAGAATTTCTTCTGTTTCGGGGACATAGTATATTTGCTGCATTTAGA GGTACAATTTCTTGGAACCTGATATAACACAGATGTTTATGACATCAGATACTGGTCAATGAATGAAGTGAGATGGATCC AATAATTTAGAGTATATTAACATGTTTAGATCAACCATTTTCTCATAATCAATTATGGAAGCTACTCCCACAAACTTCTT CACATAATTGATTCTAGCTTCAGAAACAATTGTGGAAGAGTCTCAAACATGCACTTGAAAGTTGATTCTCACGTGTAATC CAAGTAATAGGAGAGTATTACCCTAGAACATAAATGTCTGCACAATTATTTCCTGCATCAAGCCAGTCTTCCATGTCCAA ATTATTGGGTGGTTCAATGCCTCCAATATTCCAGGAACCAACAAATATCCTTGTGCAGAATAACATCCAAATCAGAGTTG CTTTTGAGATATAAGACAAAGCCAGAACAGATCAAAGTGATATAGAACAATTGTTTAAGAATGTCCACTGTTAGGGCTCC CTTACCTTTTGGTTTGATGATAGAAGCATCTTCTTGCGTTTGCATATGCTTGATTCATACTAGAAGTTTCCTGCTTGGCA TCTGATGAATTCTGGTTTCCCTCTTTGAAGTTACCAATGCTTAACATCTTTCTTAGGATCTTGCTTTCGTTCAGCTTGAA GCTCTGCATGATCTTTAGACAAAATATATAGTCATCAAGCATATAGAAAAAAAACACTTGAAATTAGAAAGACAGTGGAA GGGATACCCTACTTCTTGCACTCTTGGTCGCCAATGGTTTTCTTTACAGTGTAGAAGTGGCATGCCAAAGCTGAGAAAAG CTAGAAAAGAAAGGAACTCCGCATCAAGAGAATGGGTTAAGGGGGGAGGGGAAGGGGATTTATAAGCAGGCAGCTAGTTG AGTGCCATGATTGAGTTGATTAATAATTGGTTAAGGACAAGTAGCCATCAAGGGGACAACAGAAGAAACCTGGAATCTCA TGTGAATGTTTTGCCTCAACTTGATTGCATAT
CDS sequence (LotjaGi2g1v0189700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCCGTCGTTCGGAGCAGCGCGTCACCGAAACATGAACACCATACTCCGCCATAGTCAAACCCGTTGCATCCCCAC CTTCCTCACCCTTCTCCTCTATTCCCCTCGTCCAATCTCCACCTCCACCACCACCACCACCCCCGCCGCCGCAGTTTCCT CATTCCACCGCATGCTCAACTCGCACCCTCCCCCACGCATCCTCGAGTTCAACAAGCTCCTAACCACCCTCGTCAAATCA AAGCATTACCCCACCGCCATCTCACTCTGTTCCAAAATGGAGCTCAGAGGAATCACCCCTTGTGTCATCACCCTCACCAT CTTGATCACGTGCTTCTGTCACGTGGGTCGCGTGGCCCTCGCGTTCTCCGTGCTCGGGAAGATTCTCAAACGGGGGTATT ATCCATTTGATGCTGTGACCTTGAACGCGCTCATCAAAGGGATTTGTGTGAGTTGTGGGGTTTTGAGAGCGGTGAAGGTT CATGATGAACTGTTTTCGAAAGGGTTTCGGTTCAATGAGGTTACTTATGGGATTTTGATTGATGGGTTCTGTGAAGCGGG GCGAATAAGGGAAGCTATTGCGGTTCTGAGGGCAATAGAGACATGGGGTAGGGATGATTTAAGGCCTAATGTTGTTATGT ATAGCACCATTATTAATGGTTTGTGTAGAGATGGGTTTGTGAATGCGGCATGGGATTTGTATCGTGAAATGGTTGCGAAC AAGGTTTCTCCGAATGGTTTCACTTATGGGTCTTTGATTCATGGGTTGTGTGGTGCGGGGCGGCTGGAAGAAGCTATTGA ATTGCTGGATGAGATGTTGCGGGAGGGCATACGCGTAAGTGTTCATATCGTCACTGTTTTGGTTGATGCATTGTGTAAAA ACGGGAGGGTGCTTGACGCACGGTATCTGTTTGATGAAATGATTCAAAGAGGTTATGAACCTAACATTGTTACTTTCACC GCTTTGATGCGCGGGTATTGTTTAAATAATGACGTGGATGAGGCAAGAAAGCTGTTTGATAAGGCTGTTCGGTGGGGTAT TGTGCCTGATGTTCAGATTTTTACCGTCTTGATCGATGGATATTGCAAGGTTGAAAGATTAGGTGATGTGAAGAATCTCT TATGCGAAATGTACCGCAGGAACTTGGTTCCGAACCTTGTGACTTGGAATTCTCTGATTAATTGCTTTTGCAAATTGGAA GGAGTCTTGAGTGCTCGGGAGGTTCTTAAGGAAATGAATGCTAGAGGTCTGTCCCCTGATATTTTCACTTATACTACCTT ATTAGATGCTTTATGCAAAAGCAAACATCTTGATACGGCGATAACATTATTCAACCAACTGATTAAAAGGGGTTTCTCAC CTGATGTTTGGAGTTACACCATCATGATTAATGGATATTGCAAGAGTGAAAGGATAGATGATGCCATGAATCTTTACAAA AAAATGCTTCAAAAACATTTGGTTCCTCATATTGTAACTTACACTTCTCTCATTGATGGCTTGTGCAGATCTGGGGGAAT CTCAGCTGCGTGGGAGCTTCTCAATAAGATGCACCATAATGGTCTGCCCCCTGATAATATCACGTACAGTATCTTGTTAG ATGCTTTATGCAAAAGTGAACGTCTTGAACAGGCAATTTCATTGTTTAACCAAATGATCGAAAGGGGTTTGGCACCTGAT GTTCGGAGTTATACCATCATGATTCATGGATATTGCAAGAGTGAAAGGATAGATGAAGCCATGAATCTTTTCAACGAAAT GCTTCAAAAAAAATTGGTTCCTGATACAGTAACTTACATTTGTCTTGTTGATGGCTTGTGCAAATCTGGGAGAATCCCAT ATGCACGGCACCTTGTTAATGTGATGTATAACGATCGTCCACCCCCTGATGTTATCAATCACCTAGACGCACATCACACC AGTCATTACCTTGTTTCAGCGCATTGTTGA
Protein sequence (LotjaGi2g1v0189700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPSFGAARHRNMNTILRHSQTRCIPTFLTLLLYSPRPISTSTTTTTPAAAVSSFHRMLNSHPPPRILEFNKLLTTLVKS KHYPTAISLCSKMELRGITPCVITLTILITCFCHVGRVALAFSVLGKILKRGYYPFDAVTLNALIKGICVSCGVLRAVKV HDELFSKGFRFNEVTYGILIDGFCEAGRIREAIAVLRAIETWGRDDLRPNVVMYSTIINGLCRDGFVNAAWDLYREMVAN KVSPNGFTYGSLIHGLCGAGRLEEAIELLDEMLREGIRVSVHIVTVLVDALCKNGRVLDARYLFDEMIQRGYEPNIVTFT ALMRGYCLNNDVDEARKLFDKAVRWGIVPDVQIFTVLIDGYCKVERLGDVKNLLCEMYRRNLVPNLVTWNSLINCFCKLE GVLSAREVLKEMNARGLSPDIFTYTTLLDALCKSKHLDTAITLFNQLIKRGFSPDVWSYTIMINGYCKSERIDDAMNLYK KMLQKHLVPHIVTYTSLIDGLCRSGGISAAWELLNKMHHNGLPPDNITYSILLDALCKSERLEQAISLFNQMIERGLAPD VRSYTIMIHGYCKSERIDEAMNLFNEMLQKKLVPDTVTYICLVDGLCKSGRIPYARHLVNVMYNDRPPPDVINHLDAHHT SHYLVSAHC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 24 | 33 | 10 | - | – | |
| Phobius | 34 | 51 | 18 | - | – | |
| Gene3D | 39 | 153 | 115 | 7.2E-18 | ||
| PANTHER | 51 | 278 | 228 | 5.2E-170 | – | |
| PANTHER | 51 | 278 | 228 | 5.2E-170 | – | |
| Phobius | 52 | 649 | 598 | - | – | |
| ProSiteProfiles | 66 | 100 | 35 | 7.739 | ||
| Pfam | 89 | 147 | 59 | 0.0042 | ||
| ProSiteProfiles | 101 | 135 | 35 | 9.208 | ||
| TIGRFAM | 103 | 135 | 33 | 2.0E-4 | ||
| ProSiteProfiles | 137 | 171 | 35 | 8.364 | ||
| Gene3D | 154 | 295 | 142 | 2.6E-37 | ||
| Pfam | 167 | 197 | 31 | 2.6E-9 | ||
| ProSiteProfiles | 172 | 206 | 35 | 10.041 | ||
| TIGRFAM | 174 | 199 | 26 | 4.5E-5 | ||
| Pfam | 209 | 257 | 49 | 2.0E-17 | ||
| ProSiteProfiles | 210 | 244 | 35 | 12.299 | ||
| SUPERFAMILY | 211 | 498 | 288 | 1.48E-7 | ||
| TIGRFAM | 212 | 245 | 34 | 1.4E-9 | ||
| PANTHER | 227 | 482 | 256 | 5.2E-170 | – | |
| PANTHER | 227 | 482 | 256 | 5.2E-170 | – | |
| ProSiteProfiles | 245 | 279 | 35 | 13.252 | ||
| TIGRFAM | 247 | 280 | 34 | 1.6E-9 | ||
| Pfam | 279 | 307 | 29 | 4.7E-6 | ||
| ProSiteProfiles | 280 | 314 | 35 | 11.685 | ||
| TIGRFAM | 285 | 316 | 32 | 4.8E-9 | ||
| Gene3D | 296 | 413 | 118 | 2.3E-35 | ||
| Pfam | 314 | 363 | 50 | 2.2E-14 | ||
| ProSiteProfiles | 315 | 349 | 35 | 12.54 | ||
| TIGRFAM | 317 | 351 | 35 | 2.4E-9 | ||
| ProSiteProfiles | 350 | 384 | 35 | 10.578 | ||
| TIGRFAM | 353 | 385 | 33 | 6.0E-6 | ||
| Pfam | 384 | 433 | 50 | 2.1E-16 | ||
| ProSiteProfiles | 385 | 419 | 35 | 12.036 | ||
| TIGRFAM | 387 | 421 | 35 | 1.3E-6 | ||
| Gene3D | 414 | 484 | 71 | 5.4E-23 | ||
| ProSiteProfiles | 420 | 454 | 35 | 12.814 | ||
| TIGRFAM | 422 | 456 | 35 | 1.6E-9 | ||
| PANTHER | 436 | 632 | 197 | 5.2E-170 | – | |
| PANTHER | 436 | 632 | 197 | 5.2E-170 | – | |
| Pfam | 450 | 482 | 33 | 1.7E-11 | ||
| ProSiteProfiles | 455 | 489 | 35 | 13.121 | ||
| TIGRFAM | 458 | 489 | 32 | 1.4E-8 | ||
| Gene3D | 485 | 551 | 67 | 7.2E-22 | ||
| Pfam | 489 | 538 | 50 | 2.0E-18 | ||
| ProSiteProfiles | 490 | 524 | 35 | 12.408 | ||
| TIGRFAM | 492 | 525 | 34 | 2.8E-8 | ||
| ProSiteProfiles | 525 | 559 | 35 | 13.493 | ||
| TIGRFAM | 527 | 561 | 35 | 3.7E-10 | ||
| Gene3D | 552 | 625 | 74 | 5.0E-23 | ||
| Pfam | 559 | 608 | 50 | 1.7E-17 | ||
| ProSiteProfiles | 560 | 594 | 35 | 13.822 | ||
| TIGRFAM | 563 | 596 | 34 | 5.6E-11 | ||
| ProSiteProfiles | 595 | 629 | 35 | 9.679 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0189700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…