Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0234900 |
| Transcript ID | LotjaGi2g1v0234900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD40 repeat-like protein; TAIR: AT4G04940.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O14053|UTP21_SCHPO U3 small nucleolar RNA-associated protein 21 homolog; TrEMBL-Plants: tr|A0A0S3TD02|A0A0S3TD02_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0234900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69453759..69463121) extracted from Lotus japonicus Gifu genome v1.2.
GAGAGAGAAAGGAAGAGTAAAACGGTGCGTTTCTAGTTTCATTCTCAGCAGTTTGCAAAACTCAAAACCCTAATGTCTGA GCATAAACCCTGAATCCAGAGAAAAAGTGAAGACAGATAAAGTTTCAGTGGCGAGGGTGCTGGTGTTGTTTTGAGCAATC ACCAACCATGAAAAACCATTCAATAGTAGCAAAGCAAGAACAACCCAATCGAAAGGGAGGTATATTTGAACCTCACAGAG CAATCGGATGCATCACCACCGGCGTCCCCTTCTCCATTCAGAGACTCGGCACCGAAACTTTCGTCACTGTCAGCGTCGGT AAAGCTTTTCAGATTTTCAACTGTGCAAAGCTCACTCTGCTCCTCGCTGGTAACAACATTCTAGGTTTCCCCTTTTTAAT TTTTATTTTAATTTTTGGTCCTATTAAAATGTCCAATTTTCGATTTAGGTCCTTTACTGCCGAAGAAGATTACTGCTCTT GCCTCTTATCGTGATTACACTTTTGCTGCATATGGAACCAACATTGGAGTTTTCAAGCGCGCGCATCAGGTTCGTTCGAT GCTCGATGCAAGCTCGTGGTGTTTTTTTTTGTGATTTTGGGTGCATTTGAGGAAATTTTTAACACTTGTTGAATTTTTCA GGTTGCCACTTGGAGCAGCCATAGCGCCAAGGTTAAATTGCTGCTGGTGTTTGGAGACCATGTTATTAGTGTTGATGCTG ATGGCGACATGTTCATGTGGGCGTTTAAGGGGAATGAAGAGAGCAATGTTGTCCCGTTTAAGCATATTAAGCTAGATGAG AAATTTAGCCCTAGCTGTATAATGCATCCAGATACTTACATTAATAAGGTAAAAACGAAACGGCTAATCGTGTTTTCCTC CGTACATTAGATTCGTTGAATTTGTGTTGTTTAGACATAGGAAGGAATAAGGGTACCCTTTTTGATTGAGAAGCATGTAA GCAGGTTCTTATTGGGAGTGAGCAAGGCCCTATGCAGCTTTGGAACATTAGCACGGAGAAAAAAATATTTGAGTTCAAGG GGTGGAATTCACCTATCACCTGTTGTGTTGCATCCCCTTGTCTCGATGTTGTTGCAGTTGGCTGTGCAGATGGAAGGATT CATGTTCACAATATCAAATATGATGAAGAGTTGTGTACATTTACACATTCTACACGTGGTTCTGTGACTGCTTTATCTTT CAGCACTGGTAAGAGCAGGAAGCTTTCTATTCGTGTCCATTAATGCATGACACTCGCTGCAATACTGTAGAATAACGTCT TTTGACAAGTGTCCTTGTTTTACTTTTCCTTGACATGTGCCTGCTTTAGATGAACAACCCCTTCTAGCTTCTGGAGGTTC TTCTGGTGTTATAAGCATATGGAATCTGGAAAAGAAAAGACTCCATTCAGTTGTGAAAGAGGCGCATGATAGTGTTATCA CATCGCTACATTTTTTTGCTAATGAGCCAGTGCTGATGAGTTCATCAGCAGACAACTCTATTAAAGTAAGATTTTTTTGG TAAACATCATCTGGGGAAAATTTTATTTTCTGAGTGTAATTGTAGATGGTTTTTGATTTACTTTTACAAAATAGGATACA AGAAGTTGTTTGTGTATTTGAGAGGTAACTCTGGTTAGGTTGCCTGCAATATCACACCCATTACTAGCGATGTAACATTA TTTTCCATGTCAATGGCTTCTCCATAAAAGTTTATAAATTTATAGCGACTATAGTCAACTTATGCTGTTAGTAATCTGTT ATTGATACCGTGGTTATTGGCTTCAAGCATAATAAATTTATACTGGAGAATCAAAATATGTCATTTTTTGTGCTTTGCTG GTTGTTTTCACCCTTGAAACTTGTGCTCGTAATTTTTCCATTTAATGGAGTAAAGTGTTGCAATTTAGGTAATCTGCTTA GTGAAGAGGGTTTTACAATTTTCAATTTTGGTGTTCGATTTTAATTGATCTGAGTTTGTCTTTCATGTTCCTTTTTCTTA TCCATTCTTCCTGTAGATGTAAGAATATATATGGCTTTTGTTTTTCCCCAGATGTGGATTTTTGACACAAGTGATGGTGA CCCTCGCCTTTTGCGCTTTCGAAGTGGGCATAGTGCACCTCCCCTTTGCATAAAGTAATAATTGTTTCCAGGTTTAGTTA ATTTAAAAATTGTCATATACTTTCTTGTTTGTATATTGATTTTGATGTAAATATTGATTATTCTGGAAACAGCTTTTTCA ACTCTACCATCTGCTTTTTGCTTTCATTTATCAGTTTTTCCTGGGATGAAATTTCTTTTTGTAGTGTGGTAGAAATTAAT GGTTGGACTTTAATTTTTGAAGGCTCTATTTGTCATTGGCCATGCTCTGGAACAATATTGCTTTCTTGGCCTGTTTATGA TGTTCATCATATTGATTCTTCTGTGGAAGTCATCTTCGTTGATTCGTTGCGGAGATCTAGAGATTTTGTGTTGCTTGTTT TATTTGAGACTATGCATTATGCCTTTTTAGTGGCTTACTTTCTTGTTAGTTTTGTGAAGGAGGTTTCATTATCCTCCCTT CGCTCCTTTTGTAACCATTATTTTTTTCAAATTAAGAGTTCTTCATTTATACATAAAGATTTTAATCACTTGGACTAACT TAAAAAAGTTATAATTTTTTCATAGTTTATCTTTTTTGGGTATTGTCACCTTAATATATAGTGGTTATAAATTTTACCCT TTCAATTTGGCATGTTTCATCTCTTAAGTCACCTGAAAAATTTGTATGGCAGGTTTTATGCCAATGGAAGACATATTCTT TCTGCTGGTCAGGATCGTGCTTTTCGCCTTTTTTCTGTAGTTCAGGTTGGTTATAATTCATTTATAGAGTATTTGTTTCT CTCGTCTGAAAACAATATCCATTTATTTCAATAAAATTATCTCTTATTTGTTTGGCTTAATTGCATTTTTGGTCCCCTTA GTTTAGAGTTTAGACTAAGTGTGCTTTTGGTCCTGGTTTTTTTCAAGCTAATCAAGTCCCTCTATTTTTAAAATGAAGAA AATTTGGTCCATCTCTGAAGTTTCATATGCATCAAATAAAAAGTCTTCATTTTCTTTTCAAGTATGTTAGCGTTTATGCT GAATTGGATATATGATACAATTTTGAAAGTTAAATAATAAGGAATTTAGTGAAAATTTGTTAAAATTTCAAATTTGAAGG ATGTGAGATTAGGGTTTAATAGGTGGAAAATTGGCAGTTTTTTTTTTTTGATTGAAATTTAATATTTTGATTGTGGGTTT TGACTTTTGACAAGAATAACGTCTACACTCTACGAATAGGGATGCAACAAAAGCTAGTCCTTTACTAATGCCTATTTAAA TAATAGTCTTCGTTATGCAGAATAAATTATCATTATTTGTATTATTTTCAATCTAAGGTTTCATGTTAGTTATGATAGTT TGGATATGATATCTTTCCTTATTTTAAGAATTTCATCTTTGATAAAGCATATAGGTTGGAAAATTTTAAGATTTATTAAG ATTGTGAATCTAATGAGGATTATCTATCATTTCAGTTTATTTAGGTCTTCTATTATGTGTGGATTATAAATATCCTTTTA GTGCCTTGTGTATTTTTAGCTTTTTCTGATTAATTGGCATTCAGTTTTCTATTAAGAAAGTATACGAGTTAGAGGAACAA ACTGTATCTAAAGGAGTACATTACGTTTTGGCTTAAATGCACTTTTGGACCCTCATGTTTTAACTTTTTGCGATTGTCAA CCCTCATTTTTTTTTTTACGAATGAGAACCCTATTCTTTCAAAACGCTGCACCGTTTACCCTTCCGTCCAAATCCGTCAA AAACTTGACGGAACACGCTGATATGGCCTTCCACGTGGATAAAAGGGGGATTTAAAAAAAATGGCTTAAATGCACTTTTG GACCCTCAAGTTTACATTTTTTGCGATTGTTGACCCTGATCTTATTTTTAGTTTGAATGGAGATCATAATCTTTCAAAAC ATTGCACCGTTTACCCTTCCGTCAGAAGGCCAGGTAAGTGGGTTCCGTCAAGTTTTTGACGGATTTGGACGAAAGGGTAA ACGGTGCAACATTTTGAAAGATTAGGGTCTCCACTCGTAGAAAAATAAGATCAGGGTCAACAATCGCAAAAAATATAAAC TTGGGGGTCCAAAAGTGCATTTAAGCCTTACGTTTTTCAAAGGAGTCTTTTGCTAATAGAGCACTCTTTGGTTAACTGTG CTAAATCACTTCTCCATCCTGTATATTTGCTTTGTTCTTTGGATGTAATAAATCAAAGACAATATGGATTCTGATATTAA ATATATAATATTATTTAATTATCCTGCCTTTTTACACTCCATTTCCGTTGGCATATTTTCCCCTTTTATATTGTCTATAC ATCATGTATTAATCTATTGTGCTTGCTTGCTGTGCATAATCATTTACTCTCCATATTTATAATGTTGATGTACTTTTATG TAAATGTTAATAGGATCAACAAAGTAGGGAGCTTTCTCAACGCCATGTTTCTAAACGTGCTAAGATACTGAAAGTGAAGG TATGGCCTGTGCTCTGATTCTGCCTTTGTTGTCTGACAGAGTTTAGCAATGCATTGTCCCTTTAATATTTCCAGTATAAA TTTCAAAGGTTTTGGTTTATGCATATATATGCATGTGTGTACGTGTATACACTACAGGGTGAAGTCTTATTCGCTAAAGG ATAACCTTGTGCCAGATCCTTGTAGACCAAAATTTGGAGTTTAATGTTAATCTGTATCTTTTTTATGATTCCATTTTTTA GCACTTAGTTGTCATGATTCTGTTGGAACTGACAAAATGTTATATATGAGTAATATGGTTCTCTGTGGTTCTGTTTGCTC CTGAGTATTTTTTAAATAAAATTGTTGACAGTATAGGTGCTGTCTAGGGTGGACCTTATGAAGAATATGGTCTACCGTTG GACCATTAGTAAAAGCTGTTGTATAAGTTTCTACTTTAATGAATGGCTCAAATGTATTACTGAATGAATACCTGGAGTTA AAGGAGTTCCAAAAATTGCTATTTGGTCCTTTTATTTTTCCTTCCCCGAAAAACTCTTGACCAAGAGGTTGCTGTCAGTT CAATGGAGAGCCTAAATGTACGCCATGTTCTCATGTTTTTTGCATGTCTGTTTGTACAGGAGGAAGAAATAAAATTGAAG CCTGTGATTGCTTTCGATTGTGGTAAGTTCTTACTTTGACATTTATTCATACAGGTGTAATTTTGTCAAAACCAATCTTA CATGGAACTTAATCTTTATACTAATTGTTTCATTGAATTAATTTATTAAAAGCATGGCTGAGAACTGATTGAGTATAGAG GCTTGAAAAAAATGAGCATTGAGTGATTATATCTGTCTTACCTTTTGGCTAGTTTTATCAAGATTTAGTAATTGGCCATA ATATTTTGGAATTACGGGTGCTGGCTTTCTTTTTTGTTTTAGATAAAACCTTAAATCATTAAGGATGGGCAGGAATTTTT TTCTGAATTTTTGGGAATGGAGATCCTCCATAACAAACAGAAAAAACAACAAAGAAAAAGAGAAAACGTCAATGGAGCTA TGCTCTGCTCAATCTCCGTAAATATCATTTAAGGAAACCCCCCTTGCACCAAATAGAAGCCAATCACTAAATATTGTTCC AAATAAGCTATTGAGTGAAATAAAACTTGTTAGAAACTCGTGATTACGCTAAGGTACATATGTAGGTAATTTAACCATTA TTGCACTTCAAGCATTCTTAATGAAATTATAATATAATTTGTTTCCAGAAGTATCATACTTTCTTTTCTTGTGTAAACTT CAGCTGAAATTAGAGAACGTGATTGGTGCAATGTGGTTACTTGCCATATGGATACTGCCCAAGCATATGTGTGGAGACTT CAAAATTTTGTTCTTGGTGAGCATATATTGAATCCGTGCCCTGAAAATCCAACACCTGTAAAGGTTAGCAATTCCTCTTC ATTGAATATTTTGTTTCCCAACAATGGTTGCTTTCTAAGAAGATATGTAAAATGCTCTGCTTATTTTAGCAACTTACTAG ATTTTGTTGCTTCAAGTTCCTTTGTATAATGAGTTGGTTACGTGGTATAACAATGATACAGAACATGTGGGATTCCTGTC TCAGGTTGTTATTATTTACAGGGATTTTGACAAACTATTAAGAATTCCAACTGACTGCTGCTTTTATATTGTAACAGGCT TGTGCAATCAGTGCTTGTGGCAATTTTGCCATTTTAGGGACAGCAGGTGGTTGGATTGAGAGGTTTAACCTTCAATCTGG ACTTCACAGGGGTGCTTACATTGACAAGTCAGAATCAAGAAGTTGTGCTCATGATGGTGAAGTCGTTGGCGTTGCTTGTG ACTCAACAAACACACGCATGATAAGTGCAGGATATCAAGGAGATATAAAGGTTCATATTTCTTGTTTGACGTTACATTGT AATTCTCGCTTGTTAAAGTTTATAAAAAGCGATCATAACCATTTTAGTTGGCATGTCTACGTGGTACTGGAAATCTTTAT TTATATCTGTTTTATTGCAGGTTTGGGATTTCAAAAAACTTGAGGTTATATCCAGATTGGAGATCGGTTGTTCTGTTATT AAGATTGTTTACCATCGTTACAATGGTAAACTGAGTTTTTATTACTTCCATATCCTCTATCCGTTTGTTTGTCCCTTCCT AATTCCTTATTTTGTTTAAAAATACAATGTATGAAGAGAGGAGAAGAAATTCCTGCTGTATAATTCACATTCTTGTGTCA TGAAATGATTGAAGAGTTTTAATGTTTTTTTAGGTCTCCTGGCTACAGTAGCAAATGATCTTACAATCAGATTGTTTGAC GTCGTGGCTTGCCGACTTGTTCGTAATTTTGGAGGTCACACAGACCGTATAACAGACTTGTGTTTCAGTGAGGATGGAAA GTGGCTTCTCTCATCTAGTATGGATGGAAGTCTTAGAATTTGGGATGTGATGTTAGCAAGACAGATAGGTTTGATAGAAG TCGATGTGCCTATCACAGCATTATCTCTGTCCCCAAACATGGATGTTTTAGCAACTACCCATGTTGATAAAAATGGGGTA TACCTGTGGTGAGTTTCCAAATTTATTTCTTGTTTCATGGAACACAATTTTGCAAAAATTATTTTCTATTTTCCAATTTT TTGTTGCATCTGATATATATATATATATATATATATATATATATTCTTTTATGGTCTTTGGTGTGTAAATAAAATCTTTT TCTAGAATAAAGTCACTGGAGTATAACATTTTCCTTTAGGCAACTTTCTCCATATAAAACGTTTTCATTATCATGTCTGG TTTTGTTGAGTTTCTGTAAGACACGTGGGAAAACAGTTAACTTTGTAACTTGAATGACATTGAATGGAACGATATTTTTA TTTGTTGCAAGATTAAGTAGAACATATTAGTATTATACCATTTTTAATTGAGAAATATTATCAGGGTAAACCGGCAAATG TATTCTGGTACTTCAAATGTTGATTCGTATGCAAGTGGAAAAGAGGTCGTGAGCGTCAAGTTGCCATCTATATCTTCCAC AGAACGTTCTCAAGTTGAGCATTCTAATGAACTGGAGAATACCTCTCAACCTGAAGATGTTCAGGGTTTCCCAGCACAAT ATAAGCAAATACCTGATTTAGTTACACTTTCATTGCTGCCAAAGAGCCAGTGGCAAAGTTTGATCAATTTGGACATAATA AAGGTCTTCACTTCAGCAGAATTCTGTCTCTTGTTATGAACTTCCATACCAATTTAATTTCCTTCACTTTCATTTCTCTT TCTTCTTATGCTTGTAAATGACATCTAGTTTGTTCTGCTTGTCGAATTACAAATTCTAAATTCCAGGTTCGCAATAAACC AATTGAGCCTCCAAAAAAACCTGAAAAGGCTCCATTCTTCTTGCCTTCAGTTCCATCCCTCTCTGGGGAAATACTTTTTG AGCCTGGTAAGTTATCAGAAAAGGAGGATGGAACAGGTGGTGAAAAACCAATGAGCAGGACAAGATTAGAAGCGACACCG TCCCGTTTTCTGTATCTTCTTCAAACCTCAAAAGAGACAGACAGTTGTAAGAATCCAACTGTTTTATTTTTATTTGCTTA TTGTATTGGTTGCAGTCTATTAGAATTTATACATTCTCTGAAAGCTTATATTGCAAACATCTCTTAACATTCGACATTAC GTATTGCAGATGGAGCATTCACTGATTATATCAAAGGGTTATCGCCATCGGCCCTGGATATGGAACTTCGAATGCTTCAG GTCATTGATGACGATGATCAGCAAGAAGCTGAGAATAGACCTGAATTTGTATCAATTGAACAGCTTCTGGATTATTTTAT TTATGAGCTCTCCTGCAGAAATAATTTTGAGTTTATTCAAGCTGTTATCAGGCTATTTTTGAAGGTTTGGAACATCTCTT GTTCTTGGCCAGTTCAACTGTTATACTTTATAGAGTATAAATGGACGTGTTTTTTTCCCCCTAGCTGTATGCTTACAATG TTTCTTCATCTTGCCAGATACATGGTGAGACAATACGGAAACAGCCACACTTACAAGAAAAGGCAAGGAAGCTTCTAGAT GTTCAGCGCATGGTATGGGAGAGGGTAGATAAATTGTTCCAAAGTACAAGGTGTTGGGTTGCGTTTCTTAGCAAGACCCA AATTTAGGTGTTGCGAGCCCTTGACTTGCGAAATGTCAACCCTTTGTGATATAGCCTAGCAAAAGATGAAAACAGAACCT TGAGAAAGATTAAGTATTTGTTCTTGACTCCAGTTCCTCAGATTGATGATAGAGAAATTAGAGCAGCAAGTTGGTGGATG AGATTTCCTATTATCATTAATTTTTGTGGGTGTTCATATCGAGAATTTCATGTAACAGGATTAGAATAAGTTTGTTATAC AATCTTCATACGAGGGCAAATTTTGCAACAGGCAAATTGCTATATACATTTTTTATTCAATGAAAATTTCCAGATTTTGT GCTCATATTTCTTCCTTAACTGACAGTTGTGCTGTAAGGTAAAAAAGGACGGATGGTTAAATGTAAGAGTCATGCAAAAT TGCAGATCTACTACAATTTGCAATACTGAATATTTTGGTTTCCTTTGGAAGTCCTATGCAATATAGATGGCTATGTTATG TTATGCTTACTCCCTTTAATATTGGACCACTTGGTATCATTTTTATTACCACCAATTATCCACTGAGTTGGTTTTCATAC TTCTTTTTTTGGTTGGGGAAATCTCAGACTTTCCTGAAGCTTAGTAAGGGAGTCCTAAGTAAAATAACTTTGCTTATTTA AAT
CDS sequence (LotjaGi2g1v0234900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAACCATTCAATAGTAGCAAAGCAAGAACAACCCAATCGAAAGGGAGGTATATTTGAACCTCACAGAGCAATCGG ATGCATCACCACCGGCGTCCCCTTCTCCATTCAGAGACTCGGCACCGAAACTTTCGTCACTGTCAGCGTCGGTAAAGCTT TTCAGATTTTCAACTGTGCAAAGCTCACTCTGCTCCTCGCTGGTCCTTTACTGCCGAAGAAGATTACTGCTCTTGCCTCT TATCGTGATTACACTTTTGCTGCATATGGAACCAACATTGGAGTTTTCAAGCGCGCGCATCAGGTTGCCACTTGGAGCAG CCATAGCGCCAAGGTTAAATTGCTGCTGGTGTTTGGAGACCATGTTATTAGTGTTGATGCTGATGGCGACATGTTCATGT GGGCGTTTAAGGGGAATGAAGAGAGCAATGTTGTCCCGTTTAAGCATATTAAGCTAGATGAGAAATTTAGCCCTAGCTGT ATAATGCATCCAGATACTTACATTAATAAGGTTCTTATTGGGAGTGAGCAAGGCCCTATGCAGCTTTGGAACATTAGCAC GGAGAAAAAAATATTTGAGTTCAAGGGGTGGAATTCACCTATCACCTGTTGTGTTGCATCCCCTTGTCTCGATGTTGTTG CAGTTGGCTGTGCAGATGGAAGGATTCATGTTCACAATATCAAATATGATGAAGAGTTGTGTACATTTACACATTCTACA CGTGGTTCTGTGACTGCTTTATCTTTCAGCACTGATGAACAACCCCTTCTAGCTTCTGGAGGTTCTTCTGGTGTTATAAG CATATGGAATCTGGAAAAGAAAAGACTCCATTCAGTTGTGAAAGAGGCGCATGATAGTGTTATCACATCGCTACATTTTT TTGCTAATGAGCCAGTGCTGATGAGTTCATCAGCAGACAACTCTATTAAAATGTGGATTTTTGACACAAGTGATGGTGAC CCTCGCCTTTTGCGCTTTCGAAGTGGGCATAGTGCACCTCCCCTTTGCATAAAGTTTTATGCCAATGGAAGACATATTCT TTCTGCTGGTCAGGATCGTGCTTTTCGCCTTTTTTCTGTAGTTCAGGATCAACAAAGTAGGGAGCTTTCTCAACGCCATG TTTCTAAACGTGCTAAGATACTGAAAGTGAAGGAGGAAGAAATAAAATTGAAGCCTGTGATTGCTTTCGATTGTGCTGAA ATTAGAGAACGTGATTGGTGCAATGTGGTTACTTGCCATATGGATACTGCCCAAGCATATGTGTGGAGACTTCAAAATTT TGTTCTTGGTGAGCATATATTGAATCCGTGCCCTGAAAATCCAACACCTGTAAAGGCTTGTGCAATCAGTGCTTGTGGCA ATTTTGCCATTTTAGGGACAGCAGGTGGTTGGATTGAGAGGTTTAACCTTCAATCTGGACTTCACAGGGGTGCTTACATT GACAAGTCAGAATCAAGAAGTTGTGCTCATGATGGTGAAGTCGTTGGCGTTGCTTGTGACTCAACAAACACACGCATGAT AAGTGCAGGATATCAAGGAGATATAAAGGTTTGGGATTTCAAAAAACTTGAGGTTATATCCAGATTGGAGATCGGTTGTT CTGTTATTAAGATTGTTTACCATCGTTACAATGGTCTCCTGGCTACAGTAGCAAATGATCTTACAATCAGATTGTTTGAC GTCGTGGCTTGCCGACTTGTTCGTAATTTTGGAGGTCACACAGACCGTATAACAGACTTGTGTTTCAGTGAGGATGGAAA GTGGCTTCTCTCATCTAGTATGGATGGAAGTCTTAGAATTTGGGATGTGATGTTAGCAAGACAGATAGGTTTGATAGAAG TCGATGTGCCTATCACAGCATTATCTCTGTCCCCAAACATGGATGTTTTAGCAACTACCCATGTTGATAAAAATGGGGTA TACCTGTGGGTAAACCGGCAAATGTATTCTGGTACTTCAAATGTTGATTCGTATGCAAGTGGAAAAGAGGTCGTGAGCGT CAAGTTGCCATCTATATCTTCCACAGAACGTTCTCAAGTTGAGCATTCTAATGAACTGGAGAATACCTCTCAACCTGAAG ATGTTCAGGGTTTCCCAGCACAATATAAGCAAATACCTGATTTAGTTACACTTTCATTGCTGCCAAAGAGCCAGTGGCAA AGTTTGATCAATTTGGACATAATAAAGGTTCGCAATAAACCAATTGAGCCTCCAAAAAAACCTGAAAAGGCTCCATTCTT CTTGCCTTCAGTTCCATCCCTCTCTGGGGAAATACTTTTTGAGCCTGGTAAGTTATCAGAAAAGGAGGATGGAACAGGTG GTGAAAAACCAATGAGCAGGACAAGATTAGAAGCGACACCGTCCCGTTTTCTGTATCTTCTTCAAACCTCAAAAGAGACA GACAGTTATGGAGCATTCACTGATTATATCAAAGGGTTATCGCCATCGGCCCTGGATATGGAACTTCGAATGCTTCAGGT CATTGATGACGATGATCAGCAAGAAGCTGAGAATAGACCTGAATTTGTATCAATTGAACAGCTTCTGGATTATTTTATTT ATGAGCTCTCCTGCAGAAATAATTTTGAGTTTATTCAAGCTGTTATCAGGCTATTTTTGAAGATACATGGTGAGACAATA CGGAAACAGCCACACTTACAAGAAAAGGCAAGGAAGCTTCTAGATGTTCAGCGCATGGTATGGGAGAGGGTAGATAAATT GTTCCAAAGTACAAGGTGTTGGGTTGCGTTTCTTAGCAAGACCCAAATTTAG
Protein sequence (LotjaGi2g1v0234900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNHSIVAKQEQPNRKGGIFEPHRAIGCITTGVPFSIQRLGTETFVTVSVGKAFQIFNCAKLTLLLAGPLLPKKITALAS YRDYTFAAYGTNIGVFKRAHQVATWSSHSAKVKLLLVFGDHVISVDADGDMFMWAFKGNEESNVVPFKHIKLDEKFSPSC IMHPDTYINKVLIGSEQGPMQLWNISTEKKIFEFKGWNSPITCCVASPCLDVVAVGCADGRIHVHNIKYDEELCTFTHST RGSVTALSFSTDEQPLLASGGSSGVISIWNLEKKRLHSVVKEAHDSVITSLHFFANEPVLMSSSADNSIKMWIFDTSDGD PRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKRAKILKVKEEEIKLKPVIAFDCAE IRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILNPCPENPTPVKACAISACGNFAILGTAGGWIERFNLQSGLHRGAYI DKSESRSCAHDGEVVGVACDSTNTRMISAGYQGDIKVWDFKKLEVISRLEIGCSVIKIVYHRYNGLLATVANDLTIRLFD VVACRLVRNFGGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVMLARQIGLIEVDVPITALSLSPNMDVLATTHVDKNGV YLWVNRQMYSGTSNVDSYASGKEVVSVKLPSISSTERSQVEHSNELENTSQPEDVQGFPAQYKQIPDLVTLSLLPKSQWQ SLINLDIIKVRNKPIEPPKKPEKAPFFLPSVPSLSGEILFEPGKLSEKEDGTGGEKPMSRTRLEATPSRFLYLLQTSKET DSYGAFTDYIKGLSPSALDMELRMLQVIDDDDQQEAENRPEFVSIEQLLDYFIYELSCRNNFEFIQAVIRLFLKIHGETI RKQPHLQEKARKLLDVQRMVWERVDKLFQSTRCWVAFLSKTQI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 921 | 904 | 0.0 | – | |
| Gene3D | 19 | 646 | 628 | 3.6E-228 | ||
| Gene3D | 29 | 330 | 302 | 3.6E-228 | ||
| SUPERFAMILY | 32 | 253 | 222 | 3.6E-21 | ||
| SMART | 98 | 135 | 38 | 28.0 | ||
| ProSiteProfiles | 105 | 611 | 507 | 30.453 | ||
| SUPERFAMILY | 183 | 643 | 461 | 3.34E-60 | ||
| SMART | 187 | 226 | 40 | 4.0E-4 | ||
| Pfam | 207 | 294 | 88 | 4.0E-5 | ||
| SMART | 231 | 270 | 40 | 3.3E-4 | ||
| ProSiteProfiles | 237 | 279 | 43 | 9.573 | ||
| SMART | 273 | 313 | 41 | 0.033 | ||
| ProSiteProfiles | 281 | 312 | 32 | 11.578 | ||
| SMART | 320 | 359 | 40 | 0.0099 | ||
| SMART | 481 | 519 | 39 | 0.0041 | ||
| ProSiteProfiles | 487 | 528 | 42 | 9.907 | ||
| SMART | 522 | 560 | 39 | 6.1 | ||
| SMART | 563 | 602 | 40 | 4.1E-11 | ||
| Pfam | 565 | 602 | 38 | 1.4E-10 | ||
| ProSiteProfiles | 570 | 603 | 34 | 15.688 | ||
| ProSitePatterns | 589 | 603 | 15 | - | ||
| SMART | 605 | 644 | 40 | 20.0 | ||
| MobiDBLite | 675 | 695 | 21 | - | – | |
| Pfam | 699 | 918 | 220 | 2.8E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | RRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. | ||
| Cellular component | Small-subunit processome | A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins. |
Expression pattern of LotjaGi2g1v0234900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…