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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0272000 |
| Transcript ID | LotjaGi2g1v0272000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|A0A072U675|A0A072U675_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi2g1v0272000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74288855..74292592) extracted from Lotus japonicus Gifu genome v1.2.
ACTAGCCACTTAATACTAATGATGACTGCACAAAAAAAACATATAAAGCGAGTAAAAGAGGGACCAAAGTCATTAAGCAC CCAAATTCTGAAATTTGACAATGAGCAGTAGAAACGAGTTGGCATTATTCACGTGTTTGTTTGGTGAGTGGTTTAGCTTC TTCTAATTGTTGTTTGTCTATAAAACTAGATTCACTTCAATTTGAAATTACATCAGAAAATATTCTCCAAGGGAGTTGAG TGGACAACCATCTCATCATGTTTGGGTGCAAGTTCATTCTATTCTGTATGGTGTCCATTCTATGCATCTCTTTCTTTGTT GAAAGTTCTGATACCAAGAAGTGCATGGAGACAGAGAGGCAAGCTCTTCTCAGGTTAAAAGGTGGTTTCTCTAAGGGAAG GGAAGTTCTTTCCTCATGGATAGGTGAAGATTTCTGCAAGTGGGAAGGAATTTCATGTGACAATTTAACTTGTCATGTAA CCGGTTTGGCTATTGAAGGTAAATTGCAAGGTAAGTTAGATTCTTCAATATGTGAACTCCAACATCTAACTTCCTTAGAT CTCAGTCATAATTACTTAGCAGGAAAGATCCCAAAGTGCATTGGCTCACTTGGTCAGTTGATAGAGTTACAACTTGAAGG TAACCAATTTGTTGGTGGCATTCCTCCCTCTTTAGGGAACCTTACCAATTTGCAAACTCTCAAACTTCAGGGAAATTATT ATTTGGTTGCAAATGATCTTGAGTGGGTTTCTCACCTTCCTAATTTGAGATACCTTGATCTGTCAAATGTGAATCTTAGT CAAGCTGTTGGTTGGCTATCATCAATAAGCAAAACTCCTTCTCTGTCACAACTTCGTTTAATTGACTGCAACCTCCCTCA AGTCAATATTGAACCCACACTCCATCTGAATTCTTCCACTTCTCTCAAGGAGCTATATCTTCCAGATAATAACTTAACCT CTTTGACTGTGTCAGCGGTGGTGCTTAATGTTGGCAAATTCCTCACAGTTCTTTATCTCACATCTAATAAACTTGAGGGT AGCTTACCAGAATCCTTTCAGACTTTGTGTCAACTTAAAAAGTTACACCTGAGTTCCAACAAATTGTCTGGCAAACTCAG TGACAGCATGCAACAATTACGTTGTTCACAAAATAATATAGAGCTTTTAGATCTCAGCAATAACCCATTTAGTAGTGGGC CACTCCCTAATTTTTCAGGTTATTCATCAATTTCGGTATTGTTACTTCAGAATACCAATATTGTTGGGTCATTATCTCTG GTTACTAAACTTTGGTCGTTATCAGCATTGGATCTCTCAGGGAATCAGTTGAACGGATCACTTCCACATGGTATTGGCCA ACTCTCTGGTCTTAATTATTTGATTCTCTATTCAAATAAGTTGAGTGGTGTCATCAATGAAACACATCTATCAAGTATGT CTGGATTGAGAGAACTAGTGGTGCATCAAAATTCACTTTCATTTAATTTCAGCTTAAATTGGGTTCCACCATTCCAACTA GATGTATTCTATGCATCATCTTGTATTTTGGGTCCTAAGTTTCCAACATGGCTCAAACATCAAAGTGAACTTGTATACCT AGACATCTCTAATACTAGTATTTCAGATTCAATTCCTGATTGGTTTTGGGACCTGTTTTATAGCGGAGACTCTGTGAATG TTTCGCATAACCAACTTAGTGGACTTTTACCGCGAAGTTTGACAAGAACAAAGGTATGGCAGACACTTGATTTTAGTTTC AACAACTTATCTGGTCCACTACCTCCTTTTCCAAGATTACAAGGTCTATTTCTCTCAAATAATAGGTTTTCTGGGTCTTT ATCTTCTTTCTGTGCATCCCCACCACAAGAGTTAAGTTATCTGGATCTATCTAGTAACTTACTAGCAGGCCCATTTTTGG ATTGTTTGGGGAATTTCACAAATTTAGTATTTCTAAATTTGGCAAAAAATAAATTAACAGGGAGGATACCCGAGTCACTT GGCACTCTGCAACATATAGTGTCAATACATTTAAATAACAACAACTTCTCAGGTGAAATTCCATCTTTGGCCCTTTGTAC TAGCCTGACTGTCTTGGATTTAGGGAATAACAATCTCCAAGGAAGATTACTAACATGGGTAGGCCATCACCTGCCTCGGT TGATTGTTTTGAGTCTACGGAAAAATAAGTTCCATGGAAAAATACCTGAAACTTTGTGTAATCTATCATTTCTTCAAGTT TTAGATCTTTCTTTGAACAATATTACAGGAGAAATACCGCAGTGCCTCAATCACATGATTTCTTTGTCAAATATTCAATT TCAAAGAATTCCCATTTCATATGGACCATATGCTATTTCCAGTGGTTTTATTGAAATTGGCTCATTTGATGAGAAAGCAA TATTGTCATGGAAAGGACAAAATTGGGAATATGGAAAAAATCTTGGACTCATGACTATCATTGATCTTTCTTGCAACCAC TTGACTGGTGAAATACCACAAAGTATAACAAAACTTGTGGCATTAGCTGGATTAAATCTTTCAAGGAATGATCTCAGGGG ATTCATTCCAAACAGTATTGGTCAAATGGAAAGGTTAGAATCACTTGACTTGTCAGGAAACCATCTTTACGGTAGAATGC CTGCAAGCTTTTCAAATTTGAGTTTTCTGAGCTACATGAACTTGTCATTCAATAAATTATCAGGGGAAATTCCAATAGGC ACTCAACTGCAATCTTTTAATGCCTCTTCATATATTGGAAACGATGGACTTTGTGGTCCACCACTCTCAATCCGTTGCTA TGGGGATGTGATGTCACCAACTGGAAGCTCTGACGAAGATAAACTCATAACCTTTGGGTTTTACATCACCCTGGTGCTTG GGTTTTTTGTTGGATTTTGGGGAGTTTGTGGAACTTTAGTCATAAAAGCTTCTTGGAGACATGCCTATTTCCAATTCTTC AATGACATGAATGACTGGATGTACGTGACAATAATGGTTTTTGCTAGAAGAATGAAAAGGAGATTTCGAGTCCAAGCCTA ACAGGTAAATAAAGTTTTAATGCCTCCTAATTATTTTATAATATGGGAATGATTCATTGCTTATTATGCACAAAAGAGTA TTATTATTGCATGTATTTGAATCCAGTTGAGATGATGTCTTTTATTTCCAATACTTTGCAGGTCACGCTTTTATGTCTTC ATTAATATGACGGAGTCATGGTTCTTTTGTGGGTGGTTTTCTGCTATATGTTGTTTTCTCTAGAGCATTATCTTAAACTT TCCATTACCTCTTCTTGTACTCCCTTTCCCATCACCTCAAAGCTGAGTGTGCAAATCTGATTCCAGGATGATGTGTTGCT GTTGAGGATCTTGTGGTAGCCAGGAAATGGTTCGAGTACTATGAGGAGGTTTCATGGTTTTGGGTGGCTACTGTCTGTGG TATTTGTTGGGTATTAAGGTTCATGCCCTCCAAGAGTTGGCTTTGTGTAGTTCAATAATTTGTTGTCTTTCTCTTGTTAG CTTGTTGTTTTTTGCAGTTATCAGTGATATCTCTGTTCTGATAAATGATTATCACCTTATCTTGTATTTGGGTTCTAGCA CCTCTTCACTAGTATTGAATGCATTTTGGATTTTCTTATGTTGTATGTTCACTTTGTTGTAAGAATAATAATACTCACTG AATTCCAGTTCCCATCATAGATTGACAGAATAAAATGAGTAGAACATTCTGACTAAAA
CDS sequence (LotjaGi2g1v0272000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGGTGCAAGTTCATTCTATTCTGTATGGTGTCCATTCTATGCATCTCTTTCTTTGTTGAAAGTTCTGATACCAA GAAGTGCATGGAGACAGAGAGGCAAGCTCTTCTCAGGTTAAAAGGTGGTTTCTCTAAGGGAAGGGAAGTTCTTTCCTCAT GGATAGGTGAAGATTTCTGCAAGTGGGAAGGAATTTCATGTGACAATTTAACTTGTCATGTAACCGGTTTGGCTATTGAA GGTAAATTGCAAGGTAAGTTAGATTCTTCAATATGTGAACTCCAACATCTAACTTCCTTAGATCTCAGTCATAATTACTT AGCAGGAAAGATCCCAAAGTGCATTGGCTCACTTGGTCAGTTGATAGAGTTACAACTTGAAGGTAACCAATTTGTTGGTG GCATTCCTCCCTCTTTAGGGAACCTTACCAATTTGCAAACTCTCAAACTTCAGGGAAATTATTATTTGGTTGCAAATGAT CTTGAGTGGGTTTCTCACCTTCCTAATTTGAGATACCTTGATCTGTCAAATGTGAATCTTAGTCAAGCTGTTGGTTGGCT ATCATCAATAAGCAAAACTCCTTCTCTGTCACAACTTCGTTTAATTGACTGCAACCTCCCTCAAGTCAATATTGAACCCA CACTCCATCTGAATTCTTCCACTTCTCTCAAGGAGCTATATCTTCCAGATAATAACTTAACCTCTTTGACTGTGTCAGCG GTGGTGCTTAATGTTGGCAAATTCCTCACAGTTCTTTATCTCACATCTAATAAACTTGAGGGTAGCTTACCAGAATCCTT TCAGACTTTGTGTCAACTTAAAAAGTTACACCTGAGTTCCAACAAATTGTCTGGCAAACTCAGTGACAGCATGCAACAAT TACGTTGTTCACAAAATAATATAGAGCTTTTAGATCTCAGCAATAACCCATTTAGTAGTGGGCCACTCCCTAATTTTTCA GGTTATTCATCAATTTCGGTATTGTTACTTCAGAATACCAATATTGTTGGGTCATTATCTCTGGTTACTAAACTTTGGTC GTTATCAGCATTGGATCTCTCAGGGAATCAGTTGAACGGATCACTTCCACATGGTATTGGCCAACTCTCTGGTCTTAATT ATTTGATTCTCTATTCAAATAAGTTGAGTGGTGTCATCAATGAAACACATCTATCAAGTATGTCTGGATTGAGAGAACTA GTGGTGCATCAAAATTCACTTTCATTTAATTTCAGCTTAAATTGGGTTCCACCATTCCAACTAGATGTATTCTATGCATC ATCTTGTATTTTGGGTCCTAAGTTTCCAACATGGCTCAAACATCAAAGTGAACTTGTATACCTAGACATCTCTAATACTA GTATTTCAGATTCAATTCCTGATTGGTTTTGGGACCTGTTTTATAGCGGAGACTCTGTGAATGTTTCGCATAACCAACTT AGTGGACTTTTACCGCGAAGTTTGACAAGAACAAAGGTATGGCAGACACTTGATTTTAGTTTCAACAACTTATCTGGTCC ACTACCTCCTTTTCCAAGATTACAAGGTCTATTTCTCTCAAATAATAGGTTTTCTGGGTCTTTATCTTCTTTCTGTGCAT CCCCACCACAAGAGTTAAGTTATCTGGATCTATCTAGTAACTTACTAGCAGGCCCATTTTTGGATTGTTTGGGGAATTTC ACAAATTTAGTATTTCTAAATTTGGCAAAAAATAAATTAACAGGGAGGATACCCGAGTCACTTGGCACTCTGCAACATAT AGTGTCAATACATTTAAATAACAACAACTTCTCAGGTGAAATTCCATCTTTGGCCCTTTGTACTAGCCTGACTGTCTTGG ATTTAGGGAATAACAATCTCCAAGGAAGATTACTAACATGGGTAGGCCATCACCTGCCTCGGTTGATTGTTTTGAGTCTA CGGAAAAATAAGTTCCATGGAAAAATACCTGAAACTTTGTGTAATCTATCATTTCTTCAAGTTTTAGATCTTTCTTTGAA CAATATTACAGGAGAAATACCGCAGTGCCTCAATCACATGATTTCTTTGTCAAATATTCAATTTCAAAGAATTCCCATTT CATATGGACCATATGCTATTTCCAGTGGTTTTATTGAAATTGGCTCATTTGATGAGAAAGCAATATTGTCATGGAAAGGA CAAAATTGGGAATATGGAAAAAATCTTGGACTCATGACTATCATTGATCTTTCTTGCAACCACTTGACTGGTGAAATACC ACAAAGTATAACAAAACTTGTGGCATTAGCTGGATTAAATCTTTCAAGGAATGATCTCAGGGGATTCATTCCAAACAGTA TTGGTCAAATGGAAAGGTTAGAATCACTTGACTTGTCAGGAAACCATCTTTACGGTAGAATGCCTGCAAGCTTTTCAAAT TTGAGTTTTCTGAGCTACATGAACTTGTCATTCAATAAATTATCAGGGGAAATTCCAATAGGCACTCAACTGCAATCTTT TAATGCCTCTTCATATATTGGAAACGATGGACTTTGTGGTCCACCACTCTCAATCCGTTGCTATGGGGATGTGATGTCAC CAACTGGAAGCTCTGACGAAGATAAACTCATAACCTTTGGGTTTTACATCACCCTGGTGCTTGGGTTTTTTGTTGGATTT TGGGGAGTTTGTGGAACTTTAGTCATAAAAGCTTCTTGGAGACATGCCTATTTCCAATTCTTCAATGACATGAATGACTG GATGTACGTGACAATAATGGTTTTTGCTAGAAGAATGAAAAGGAGATTTCGAGTCCAAGCCTAA
Protein sequence (LotjaGi2g1v0272000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGCKFILFCMVSILCISFFVESSDTKKCMETERQALLRLKGGFSKGREVLSSWIGEDFCKWEGISCDNLTCHVTGLAIE GKLQGKLDSSICELQHLTSLDLSHNYLAGKIPKCIGSLGQLIELQLEGNQFVGGIPPSLGNLTNLQTLKLQGNYYLVAND LEWVSHLPNLRYLDLSNVNLSQAVGWLSSISKTPSLSQLRLIDCNLPQVNIEPTLHLNSSTSLKELYLPDNNLTSLTVSA VVLNVGKFLTVLYLTSNKLEGSLPESFQTLCQLKKLHLSSNKLSGKLSDSMQQLRCSQNNIELLDLSNNPFSSGPLPNFS GYSSISVLLLQNTNIVGSLSLVTKLWSLSALDLSGNQLNGSLPHGIGQLSGLNYLILYSNKLSGVINETHLSSMSGLREL VVHQNSLSFNFSLNWVPPFQLDVFYASSCILGPKFPTWLKHQSELVYLDISNTSISDSIPDWFWDLFYSGDSVNVSHNQL SGLLPRSLTRTKVWQTLDFSFNNLSGPLPPFPRLQGLFLSNNRFSGSLSSFCASPPQELSYLDLSSNLLAGPFLDCLGNF TNLVFLNLAKNKLTGRIPESLGTLQHIVSIHLNNNNFSGEIPSLALCTSLTVLDLGNNNLQGRLLTWVGHHLPRLIVLSL RKNKFHGKIPETLCNLSFLQVLDLSLNNITGEIPQCLNHMISLSNIQFQRIPISYGPYAISSGFIEIGSFDEKAILSWKG QNWEYGKNLGLMTIIDLSCNHLTGEIPQSITKLVALAGLNLSRNDLRGFIPNSIGQMERLESLDLSGNHLYGRMPASFSN LSFLSYMNLSFNKLSGEIPIGTQLQSFNASSYIGNDGLCGPPLSIRCYGDVMSPTGSSDEDKLITFGFYITLVLGFFVGF WGVCGTLVIKASWRHAYFQFFNDMNDWMYVTIMVFARRMKRRFRVQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| PANTHER | 6 | 234 | 229 | 2.0E-157 | – | |
| PANTHER | 6 | 234 | 229 | 2.0E-157 | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 23 | 6 | - | – | |
| Gene3D | 24 | 185 | 162 | 1.5E-43 | ||
| Phobius | 24 | 865 | 842 | - | – | |
| Pfam | 31 | 68 | 38 | 1.2E-8 | ||
| SUPERFAMILY | 58 | 417 | 360 | 5.78E-49 | – | |
| SMART | 94 | 118 | 25 | 21.0 | ||
| Pfam | 96 | 118 | 23 | 0.16 | ||
| SMART | 167 | 189 | 23 | 260.0 | ||
| Gene3D | 186 | 299 | 114 | 5.7E-12 | ||
| SMART | 221 | 243 | 23 | 320.0 | ||
| Pfam | 222 | 283 | 62 | 8.2E-7 | ||
| SMART | 270 | 293 | 24 | 140.0 | ||
| Gene3D | 300 | 469 | 170 | 1.9E-28 | ||
| SMART | 345 | 369 | 25 | 26.0 | ||
| PRINTS | 348 | 361 | 14 | 4.4E-5 | – | |
| PANTHER | 434 | 900 | 467 | 2.0E-157 | – | |
| PANTHER | 434 | 900 | 467 | 2.0E-157 | – | |
| Gene3D | 470 | 849 | 380 | 9.8E-107 | ||
| SUPERFAMILY | 497 | 844 | 348 | 2.21E-56 | – | |
| SMART | 511 | 534 | 24 | 270.0 | ||
| SMART | 560 | 584 | 25 | 150.0 | ||
| SMART | 656 | 680 | 25 | 72.0 | ||
| Pfam | 657 | 672 | 16 | 0.44 | ||
| Pfam | 733 | 790 | 58 | 3.1E-10 | ||
| SMART | 753 | 776 | 24 | 270.0 | ||
| PRINTS | 777 | 790 | 14 | 4.4E-5 | – | |
| SMART | 777 | 800 | 24 | 17.0 | ||
| Phobius | 866 | 889 | 24 | - | – | |
| TMHMM | 867 | 889 | 23 | - | – | |
| Phobius | 890 | 927 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0272000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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