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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0324000 |
| Transcript ID | LotjaGi2g1v0324000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|F4IB81|LYK3_ARATH LysM domain receptor-like kinase 3; TrEMBL-Plants: tr|D3KU53|D3KU53_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi2g1v0324000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79907977..79913419) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTGTCATTGTTATAGCCGTCTGAGATCCCACAAAAGATACCCTGCCCTTACAGACAAGTATAAGAGGCACAAAAAA AACTTTATTCTAATCATCATCATTCATGGACTCATCGTAATATGTAAATTCGGAACCTATAAGAAAAAGGATCCAGGTAA TTAATATCAATTAATCTTGGTGAGTTAGGATGTTCCTGTTTCTTGAAAGCAGCTACAAACAACTAAATGATGTTAAGAGA AGCTACATCATGGTTTTGAAACTTCCTCATTGCATTGAAGAAAATGTTTTATGATTTCACAACTATGGCTTCTCTAACTC ATCCTCTATGTGTTCTCCTTACTCTAATGGCTGCAGCTTCATTTGCAAGTGTGTTTTCCCTTGAAGTTTCATCCAAAACA ACTTACATGGAACCTTTTAACTGCTCTACAAAGATCAGAACATGCAATTCCTTGCTCTACCACATAAGCATCGGTCTCAA GGTCGAAGAAATAGCCCGCTTTTACTCGGTTAATCTCTCCCGAATCAAGCCAATAACTCGCGGTACCAAGCAAGATTACC TTGTCTCAGTGCCTTGTACTTGCAGAAACACCAATGGCCTTAATGGATATTTCTATCATACATCCTACAAGGTTAAGGTT AATGACAGTTTTGTGGATATTCAGAACCTGTTCTATAGTGGACAAGCTTGGCCTGTGAATGAAGATTTGGTGGTTCCAAA TGAGACTATGACAATACATATTCCTTGTGGGTGTTCAGAAAGTGGCTCTCAAATTGTCGTCACATACACAGTTCAAAGGA ATGATACACCATTATCAATTGCTCTTTTGCTAAATGCTACGGTTGAAGGCATGGTGAGTGTGAACTCAGTTATGGCTCCG AATCCCACATTCATAGATGTTGGTTGGGTGTTATATGTTCCCAAGGAGTTGAATCCAATTTCCCATGGAAAAGGTGAGTT CTATTTCTTAACCTGTCCCCAGATTTGAATATGCATGGCATTCACATATTTACAATGTTTTGGAGTACATGTTCCTTTCC CACATTCAGAAGCAAAATCATGTTAATTAAGTGAGACTATTTTTTTTTTTTTACTTATGCCTTGGACATGCCTCATATCG CGTTTGGTTCTGCGATAGAAAGCCCTAGAATTACTTATTGGAAGAAGGCACAAATTGTATCTTATGGAGTTACCGTGCTT TGAATTATGTGACACAACCAATGAACACACTGTCAGAGTGTGTGCCGCCACGGAAGCAAACAAGCACTTGTTTAGTGAAC TGCATGATGATCCAAATTCATATACTTACAACTGCATTGAGTTCGCATTGATTTCAGCATGTTTTGGACTGAGCCAATTG CATTGTTATGGTGCATGTTTGGATACACGGTAAACGAGAATTGATTATGGGAGAAGCTAGTCATAGTTGCTTTTGTGGTA GCGGAATTGATTTTGAAAGATCTGAATGTGAATTAAAACATGCACATAATTCGATTTGAAAGCTGATTCCTATAGTAGAA CTTTTATCTTTAGGTAACAACCTCAGCTGTTGTTAGGAAGATTTTATAAAATTACAAGGGGTTATCTTTGATTGATCAAT ACTTCTATTTTGATGCTACCATCTGCCCAAAACCTGCATCACAATTATGGCCAAATATAGATGACTAGTCATTCAATCAT CTAATTTCAACATCATCAGATAAATGTTTCTCATGCATCAATCATCGAAATTGGTAACCTTTCACCAATTGCTGTTCAGT GTTCATAGACCAGGTGAAGTTTAAAGTTTAGATAGTTTCATTTTTGCTAGCAGGCACTCTTAATTTATCATGCTTTGTTT TGTTGTTGTTTGCAGAAAATAAACACAAGCTGGAGAAAATTATTGGCATCTTAGCGGGTGTGATATTACTTTCAATTATT ACCTTGATCATTCTTATCGTCAGGAGAAATAGATCCTATGAAACCTGCAAAGATGATCCACGCGCTATCTCAAAAAGATC AATCGGCAAAAGAACTAGTTCCTTAATGAACCGCGACTTTCACAAAGAATACATGGAAGGTAACAAAAGTAATATTTGAA AAATACTAAAATTTCAGCATTAGGTTAATAGCTCTACATGCAAGGAAACTGAGAGGAAGATTGCTGCTTATTCATGGAAA ATATTGATGCAGATGCGACATCATTTGACTCAGAAAGACCAGTAATTTATACTCTTGAGGAGATTGAACAAGCTACTAAT GACTTCGATGAAACTCGAAGGATTGGAGTCGGTGGATATGGAACAGTGTATTTTGGAGTGTTAGGGGAGAAGGTATGGAT TATGGAAATCCCACCTACATTCTTTAATGGTCCTCCCCATGCTAGCATTTCTTTTTCATGCTGCAACAAAGCATTGAAGA ATAATAGCTATTTTGATTTTCAGGAGGTTGCTATAAAGAAGATGAAATCTAACAAATCCAAAGAATTCTATGCAGAACTC AAGGCCTTGTGTAAGATCCATCACATTAACATTGTAAGTGACATCTCTGATGAAGTTATTTTGGACAGAGGCTTGATCAT CTCATTTTGTTTGATTATATTATAGATGTAATCACTGTTTCAGGTGGAGTTATTAGGATATGCCAGCGGAGATGACCACC TTTACTTGGTGTATGAGTATGTGCCCAATGGATCTCTCAGTGAACATCTTCATGATCCCTTACTGAAAGGTAAATTGGCT CTAAGATCTATTTGCCTGCAAAATGCAAACCTTCTGGCTTTTAGAAATGTTCTAAAATGCCATAAAGGCTACAAGACCAG ACCTCCAAACAAAGCATATCATAGATGATAGTTTTTATGGTAATTGCAGCCTCATATATTGATTTTTTAACTCATGAAAG AATGAAAAATAGATTATTTTCTGAAACACTAGGAAGCATGTTATATAGAATTGACATCAATTGTTGTTTATACTTAATAA GACCATTGAACGAAAGTTCGATTCAACATGCCACTAATGTCGTTGTACTACATTTCTGTAAGTAAAAGAAAAAGGCTTAA TTGCAACTTTGGTCCCTGACGTTTACCAATTCCACGATTTTAGTCCCCCACCTATTTTAATTACACAGATGGTCCCTGAC TTTGCTGGCAGTCTGCAACGTTGGTCCTACCGTTTGTTTGTTAATGGAGGAGGTTTACGTGGATGGTCACTTAGCTGATG TGGAAGTTGAATTAGAGAGAGAAAGAGACCAGCAACTGATTCAGCCTTCTTCCTCGCCTCTAGGGACTCGTTCGTTCTTT ATCTCTTCCTTTTCGCTAAATCTCAAGCTTCGAAACATCTTCCTCACGGTGCTCTGTTTTTTAAGGAGGAAGAGGGTAGA AGATGACCGTTGCAGGTCTCACGTGCAACTCACGTGTTTCCCTCTCTCTTCAGTCCTTCTTTCTCTCTCCAATTGGACAT CCACGTAAGCCTCCTCCGTTAACAAATAAACGGCAGGACCAACATTGCAGACGGGCAGCAAAGTCAGGGACCATCCGTGT AATTAAATTAGGCGGGGGACTAAAATTGTGGAATTGGTAAACGTCAGGGACCAAAGTTGCAATTAAGCCAAAGAAAAAAA ACTAACATTTCTCTCATGTTTATGTCAAGAAATCTAAATTGTGGTACTGGAACAGGTCACCAGCCTCTTTCTTGGTGTGC TAGGATTCAAATTGCACTGGATTCAGCAAAAGGTATTGAATACATACATGATTACACAAAAGCACAGTATGTGCACCGCG ATATAAAGACTAGTAATATTCTTCTTGATGAGAAGCTCAGAGCAAAGGTATTTTTCCTTGATTTCTTAGTCTGTCCTGAT TTTTTTTAGTTTTATGAACTAGTTATCATTATACATATCTAAGGCATGCTAACCTGCAAGAAACAACTATGTAAGTCAGT TGCCTACTTGCCTAATGATAACAAGAAAAGATGGTCTTAAAACATTATACTAGTAAAATCAAGTTAATACACTTGCTGGA CATGAATTTATTTGATTTATTAGTAAAATCAAGTTAAGCAAGTAATGTTGAATCGAGGTCTTTCTACTTCTTTTCATACC AAAGCATTTGATTTCATATGTAGGTAGCAGATTTTGGGCTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATA GCAACAAGGCTTGTTGGAACACCAGGCTATCTTCCACCAGAGTAGGTTTCATCCTTTTCAATTATAACTAGATCTTGGTG CATTCAACAGAAACAAATTTCCTCACTGCCATTAATCTTCTTAAACTCAAGCAAAATAAATTACTTCACAGTTAATATTG CTTCTGATATCATTACTTTTTTTCCCTTTTAGATCTCTAAAGGAGCTTCAAGTGACAGTAAAAACTGATGTATTTGCATT TGGGGTGGTTATGTTAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACAACCAAGAAGCCAACAATATGAGATCAC TTGTTGCAGTTGTAAGTTAACTCTTGTTTGAGAGAAAAGAAAATATAGATGGGGCTTGAAAGTATTATATAAGACATCCA AAAAGTCATTCACCAAAAGTGAAGTTTACTTTTATTCACATAGATCTAACTCTGCAGTTTACTCAATACTCTTACACATC TTTTGTAATTAAAGGAAAGAAATCTGATCTTTCTTTTCATCTCATTCAGGTTAACCAAATATTTCAAGAAGATAACCCTG AGACTGCTTTAGAAGTTACCGTGGATGGGAATCTACAACGTAGCTATCCTATGGAAGATGTCTACAATGTAAGATTCAAT CTACATCTTCTATTTTGCCGATAATGTTGGTTTTCTAATTATATATCTATGTGCCAATGTATGCTTCATTTTGATATGAA TACTGCAGATGGCAGAACTATCACACTGGTGCTTGCGCGAAAATCCGGTGGACAGGCCTGAAATGAGTGAGATCGTTGTG AAATTGTCAAAGATTATAATGTCCTCGATAGAGTGGGAAGCATCACTTGGCGGAGACAGCCAAGTCTTCAGCGGGGTATT TGATGGAAGATGAATGAAGACTACTCTTTACTAATTAAGAATTGTCTATTAAGAGCCTTCTCTTGCTGCCTTAATATCTT AATCTTTTGTATTTAATCCAATCCTTGTTCAAAACTGCTGCCACTTGAGTTCATAACAAGTTATTAGGAGTACATATAAT GATTGATAGACAATTATATATAGGATGAGATCGGGTTAATGAGTTGTTATTGTAACAAAAAATTGTCAATGCTAACTACA TTTTGTTGAAAAAATTGAAATGTATAACTAGTTATGTGAGGAGACAAATTAACAGTTTTATCTCTAGCTTAACTATGGCA TATACAAAGCTACTAGGTGGTAAGATACACAAAGATGATTAAGTGTTGAAACCAGTTATATATATCTGATAGACTTGGTT GCT
CDS sequence (LotjaGi2g1v0324000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTATGATTTCACAACTATGGCTTCTCTAACTCATCCTCTATGTGTTCTCCTTACTCTAATGGCTGCAGCTTCATT TGCAAGTGTGTTTTCCCTTGAAGTTTCATCCAAAACAACTTACATGGAACCTTTTAACTGCTCTACAAAGATCAGAACAT GCAATTCCTTGCTCTACCACATAAGCATCGGTCTCAAGGTCGAAGAAATAGCCCGCTTTTACTCGGTTAATCTCTCCCGA ATCAAGCCAATAACTCGCGGTACCAAGCAAGATTACCTTGTCTCAGTGCCTTGTACTTGCAGAAACACCAATGGCCTTAA TGGATATTTCTATCATACATCCTACAAGGTTAAGGTTAATGACAGTTTTGTGGATATTCAGAACCTGTTCTATAGTGGAC AAGCTTGGCCTGTGAATGAAGATTTGGTGGTTCCAAATGAGACTATGACAATACATATTCCTTGTGGGTGTTCAGAAAGT GGCTCTCAAATTGTCGTCACATACACAGTTCAAAGGAATGATACACCATTATCAATTGCTCTTTTGCTAAATGCTACGGT TGAAGGCATGGTGAGTGTGAACTCAGTTATGGCTCCGAATCCCACATTCATAGATGTTGGTTGGGTGTTATATGTTCCCA AGGAGTTGAATCCAATTTCCCATGGAAAAGAAAATAAACACAAGCTGGAGAAAATTATTGGCATCTTAGCGGGTGTGATA TTACTTTCAATTATTACCTTGATCATTCTTATCGTCAGGAGAAATAGATCCTATGAAACCTGCAAAGATGATCCACGCGC TATCTCAAAAAGATCAATCGGCAAAAGAACTAGTTCCTTAATGAACCGCGACTTTCACAAAGAATACATGGAAGATGCGA CATCATTTGACTCAGAAAGACCAGTAATTTATACTCTTGAGGAGATTGAACAAGCTACTAATGACTTCGATGAAACTCGA AGGATTGGAGTCGGTGGATATGGAACAGTGTATTTTGGAGTGTTAGGGGAGAAGGAGGTTGCTATAAAGAAGATGAAATC TAACAAATCCAAAGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATCCATCACATTAACATTGTGGAGTTATTAGGAT ATGCCAGCGGAGATGACCACCTTTACTTGGTGTATGAGTATGTGCCCAATGGATCTCTCAGTGAACATCTTCATGATCCC TTACTGAAAGGTCACCAGCCTCTTTCTTGGTGTGCTAGGATTCAAATTGCACTGGATTCAGCAAAAGGTATTGAATACAT ACATGATTACACAAAAGCACAGTATGTGCACCGCGATATAAAGACTAGTAATATTCTTCTTGATGAGAAGCTCAGAGCAA AGGTAGCAGATTTTGGGCTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACA CCAGGCTATCTTCCACCAGAATCTCTAAAGGAGCTTCAAGTGACAGTAAAAACTGATGTATTTGCATTTGGGGTGGTTAT GTTAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACAACCAAGAAGCCAACAATATGAGATCACTTGTTGCAGTTG TTAACCAAATATTTCAAGAAGATAACCCTGAGACTGCTTTAGAAGTTACCGTGGATGGGAATCTACAACGTAGCTATCCT ATGGAAGATGTCTACAATATGGCAGAACTATCACACTGGTGCTTGCGCGAAAATCCGGTGGACAGGCCTGAAATGAGTGA GATCGTTGTGAAATTGTCAAAGATTATAATGTCCTCGATAGAGTGGGAAGCATCACTTGGCGGAGACAGCCAAGTCTTCA GCGGGGTATTTGATGGAAGATGA
Protein sequence (LotjaGi2g1v0324000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFYDFTTMASLTHPLCVLLTLMAAASFASVFSLEVSSKTTYMEPFNCSTKIRTCNSLLYHISIGLKVEEIARFYSVNLSR IKPITRGTKQDYLVSVPCTCRNTNGLNGYFYHTSYKVKVNDSFVDIQNLFYSGQAWPVNEDLVVPNETMTIHIPCGCSES GSQIVVTYTVQRNDTPLSIALLLNATVEGMVSVNSVMAPNPTFIDVGWVLYVPKELNPISHGKENKHKLEKIIGILAGVI LLSIITLIILIVRRNRSYETCKDDPRAISKRSIGKRTSSLMNRDFHKEYMEDATSFDSERPVIYTLEEIEQATNDFDETR RIGVGGYGTVYFGVLGEKEVAIKKMKSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDP LLKGHQPLSWCARIQIALDSAKGIEYIHDYTKAQYVHRDIKTSNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGT PGYLPPESLKELQVTVKTDVFAFGVVMLELITGKRALFRDNQEANNMRSLVAVVNQIFQEDNPETALEVTVDGNLQRSYP MEDVYNMAELSHWCLRENPVDRPEMSEIVVKLSKIIMSSIEWEASLGGDSQVFSGVFDGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 15 | 27 | 13 | - | – | |
| PANTHER | 16 | 620 | 605 | 1.8E-292 | – | |
| PANTHER | 16 | 620 | 605 | 1.8E-292 | – | |
| Phobius | 28 | 32 | 5 | - | – | |
| Phobius | 33 | 231 | 199 | - | – | |
| Gene3D | 160 | 225 | 66 | 2.0E-8 | ||
| SUPERFAMILY | 166 | 213 | 48 | 1.83E-6 | – | |
| ProSiteProfiles | 166 | 212 | 47 | 8.572 | ||
| Phobius | 232 | 252 | 21 | - | – | |
| TMHMM | 233 | 252 | 20 | - | – | |
| Phobius | 253 | 620 | 368 | - | – | |
| Gene3D | 275 | 387 | 113 | 4.6E-25 | – | |
| SUPERFAMILY | 300 | 592 | 293 | 1.75E-76 | ||
| ProSiteProfiles | 316 | 596 | 281 | 40.117 | ||
| SMART | 316 | 596 | 281 | 1.2E-43 | ||
| Pfam | 317 | 589 | 273 | 1.4E-50 | ||
| ProSitePatterns | 322 | 344 | 23 | - | ||
| Gene3D | 388 | 605 | 218 | 9.9E-57 | – | |
| ProSitePatterns | 435 | 447 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0324000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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