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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0394950 |
| Transcript ID | LotjaGi2g1v0394950.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT3G21630.1 chitin elicitor receptor kinase 1; Swiss-Prot: sp|Q0GXS4|NFP_MEDTR Serine/threonine receptor-like kinase NFP; TrEMBL-Plants: tr|Q70KR1|Q70KR1_LOTJA Nod-factor receptor 5; Found in the gene: LotjaGi2g1v0394950 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89244457..89246244) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGTCTTCTTTCTTACCTCTGGCTCTCTGAGTCTTTTTCTTGCACTCACGTTGCTTTTCACTAACATCGCCGCTCG ATCAGAAAAGATTAGCGGCCCAGACTTTTCATGCCCTGTTGACTCACCTCCTTCTTGTGAAACATATGTGACATACACAG CTCAGTCTCCAAATCTTCTGAGCCTGACAAACATATCTGATATATTTGATATCAGTCCTTTGTCCATTGCAAGAGCCAGT AACATAGATGCAGGGAAGGACAAGCTGGTTCCAGGCCAAGTCTTACTGGTACCTGTAACTTGCGGTTGCGCCGGAAACCA CTCTTCTGCCAATACCTCCTACCAAATCCAGCTAGGTGATAGCTACGACTTTGTTGCAACCACTTTATATGAGAACCTTA CAAATTGGAATATAGTACAAGCTTCAAACCCAGGGGTAAATCCATATTTGTTGCCAGAGCGCGTCAAAGTAGTATTCCCT TTATTCTGCAGGTGCCCTTCAAAGAACCAGTTGAACAAAGGGATTCAGTATCTGATTACTTATGTGTGGAAGCCCAATGA CAATGTTTCCCTTGTGAGTGCCAAGTTTGGTGCATCCCCAGCGGACATATTGACTGAAAACCGCTACGGTCAAGACTTCA CTGCTGCAACCAACCTTCCAATTTTGATCCCAGTGACACAGTTGCCAGAGCTTACTCAACCTTCTTCAAATGGAAGGAAA AGCAGCATTCATCTTCTGGTTATACTTGGTATTACCCTGGGATGCACGTTGCTAACTGCAGTTTTAACCGGGACCCTCGT ATATGTATACTGCCGCAGAAAGAAGGCTCTGAATAGGACTGCTTCATCAGCTGAGACTGCTGATAAACTACTTTCTGGAG TTTCAGGCTATGTAAGCAAGCCAAACGTGTATGAAATCGACGAGATAATGGAAGCTACGAAGGATTTCAGCGATGAGTGC AAGGTTGGGGAATCAGTGTACAAGGCCAACATAGAAGGTCGGGTTGTAGCGGTAAAGAAAATCAAGGAAGGTGGTGCCAA TGAGGAACTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTGGTGAAACTAATGGGTGTCTCCTCAGGCTATGATGGAA ACTGTTTCTTGGTTTATGAATATGCTGAAAATGGGTCTCTTGCTGAGTGGCTGTTCTCCAAGTCTTCAGGAACCCCAAAC TCCCTTACATGGTCTCAAAGGATAAGCATAGCAGTGGATGTTGCTGTGGGTCTGCAATACATGCATGAACATACCTATCC AAGAATAATACACAGGGACATCACAACAAGTAATATCCTTCTCGACTCGAACTTCAAGGCCAAGATAGCGAATTTCGCCA TGGCCAGAACTTCGACCAACCCCATGATGCCAAAAATCGATGTCTTCGCTTTCGGGGTGCTTCTGATAGAGTTGCTCACC GGAAGGAAAGCCATGACAACCAAGGAGAACGGCGAGGTGGTTATGCTGTGGAAGGATATGTGGGAGATCTTTGACATAGA AGAGAATAGAGAGGAGAGGATCAGAAAATGGATGGATCCTAATTTAGAGAGCTTTTATCATATAGATAATGCTCTCAGCT TGGCATCCTTAGCAGTGAATTGCACAGCTGATAAGTCTTTGTCTCGACCCTCCATGGCTGAAATTGTTCTTAGCCTCTCC TTTCTCACTCAACAATCATCTAACCCCACATTAGAGAGATCCTTGACTTCTTCTGGGTTAGATGTAGAAGATGATGCTCA TATTGTGACTTCCATTACTGCACGTTAA
CDS sequence (LotjaGi2g1v0394950.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTCTTCTTTCTTACCTCTGGCTCTCTGAGTCTTTTTCTTGCACTCACGTTGCTTTTCACTAACATCGCCGCTCG ATCAGAAAAGATTAGCGGCCCAGACTTTTCATGCCCTGTTGACTCACCTCCTTCTTGTGAAACATATGTGACATACACAG CTCAGTCTCCAAATCTTCTGAGCCTGACAAACATATCTGATATATTTGATATCAGTCCTTTGTCCATTGCAAGAGCCAGT AACATAGATGCAGGGAAGGACAAGCTGGTTCCAGGCCAAGTCTTACTGGTACCTGTAACTTGCGGTTGCGCCGGAAACCA CTCTTCTGCCAATACCTCCTACCAAATCCAGCTAGGTGATAGCTACGACTTTGTTGCAACCACTTTATATGAGAACCTTA CAAATTGGAATATAGTACAAGCTTCAAACCCAGGGGTAAATCCATATTTGTTGCCAGAGCGCGTCAAAGTAGTATTCCCT TTATTCTGCAGGTGCCCTTCAAAGAACCAGTTGAACAAAGGGATTCAGTATCTGATTACTTATGTGTGGAAGCCCAATGA CAATGTTTCCCTTGTGAGTGCCAAGTTTGGTGCATCCCCAGCGGACATATTGACTGAAAACCGCTACGGTCAAGACTTCA CTGCTGCAACCAACCTTCCAATTTTGATCCCAGTGACACAGTTGCCAGAGCTTACTCAACCTTCTTCAAATGGAAGGAAA AGCAGCATTCATCTTCTGGTTATACTTGGTATTACCCTGGGATGCACGTTGCTAACTGCAGTTTTAACCGGGACCCTCGT ATATGTATACTGCCGCAGAAAGAAGGCTCTGAATAGGACTGCTTCATCAGCTGAGACTGCTGATAAACTACTTTCTGGAG TTTCAGGCTATGTAAGCAAGCCAAACGTGTATGAAATCGACGAGATAATGGAAGCTACGAAGGATTTCAGCGATGAGTGC AAGGTTGGGGAATCAGTGTACAAGGCCAACATAGAAGGTCGGGTTGTAGCGGTAAAGAAAATCAAGGAAGGTGGTGCCAA TGAGGAACTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTGGTGAAACTAATGGGTGTCTCCTCAGGCTATGATGGAA ACTGTTTCTTGGTTTATGAATATGCTGAAAATGGGTCTCTTGCTGAGTGGCTGTTCTCCAAGTCTTCAGGAACCCCAAAC TCCCTTACATGGTCTCAAAGGATAAGCATAGCAGTGGATGTTGCTGTGGGTCTGCAATACATGCATGAACATACCTATCC AAGAATAATACACAGGGACATCACAACAAGTAATATCCTTCTCGACTCGAACTTCAAGGCCAAGATAGCGAATTTCGCCA TGGCCAGAACTTCGACCAACCCCATGATGCCAAAAATCGATGTCTTCGCTTTCGGGGTGCTTCTGATAGAGTTGCTCACC GGAAGGAAAGCCATGACAACCAAGGAGAACGGCGAGGTGGTTATGCTGTGGAAGGATATGTGGGAGATCTTTGACATAGA AGAGAATAGAGAGGAGAGGATCAGAAAATGGATGGATCCTAATTTAGAGAGCTTTTATCATATAGATAATGCTCTCAGCT TGGCATCCTTAGCAGTGAATTGCACAGCTGATAAGTCTTTGTCTCGACCCTCCATGGCTGAAATTGTTCTTAGCCTCTCC TTTCTCACTCAACAATCATCTAACCCCACATTAGAGAGATCCTTGACTTCTTCTGGGTTAGATGTAGAAGATGATGCTCA TATTGTGACTTCCATTACTGCACGTTAA
Protein sequence (LotjaGi2g1v0394950.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVFFLTSGSLSLFLALTLLFTNIAARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPLSIARAS NIDAGKDKLVPGQVLLVPVTCGCAGNHSSANTSYQIQLGDSYDFVATTLYENLTNWNIVQASNPGVNPYLLPERVKVVFP LFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGASPADILTENRYGQDFTAATNLPILIPVTQLPELTQPSSNGRK SSIHLLVILGITLGCTLLTAVLTGTLVYVYCRRKKALNRTASSAETADKLLSGVSGYVSKPNVYEIDEIMEATKDFSDEC KVGESVYKANIEGRVVAVKKIKEGGANEELKILQKVNHGNLVKLMGVSSGYDGNCFLVYEYAENGSLAEWLFSKSSGTPN SLTWSQRISIAVDVAVGLQYMHEHTYPRIIHRDITTSNILLDSNFKAKIANFAMARTSTNPMMPKIDVFAFGVLLIELLT GRKAMTTKENGEVVMLWKDMWEIFDIEENREERIRKWMDPNLESFYHIDNALSLASLAVNCTADKSLSRPSMAEIVLSLS FLTQQSSNPTLERSLTSSGLDVEDDAHIVTSITAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 3 | 21 | 19 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| PANTHER | 10 | 594 | 585 | 7.4E-242 | – | |
| PANTHER | 10 | 594 | 585 | 7.4E-242 | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 242 | 216 | - | – | |
| ProSiteProfiles | 50 | 97 | 48 | 9.419 | ||
| Pfam | 61 | 98 | 38 | 0.0043 | ||
| ProSiteProfiles | 179 | 223 | 45 | 6.777 | ||
| Phobius | 243 | 270 | 28 | - | – | |
| TMHMM | 245 | 267 | 23 | - | – | |
| Phobius | 271 | 595 | 325 | - | – | |
| ProSiteProfiles | 284 | 562 | 279 | 22.973 | ||
| Gene3D | 292 | 381 | 90 | 2.6E-13 | – | |
| SUPERFAMILY | 298 | 562 | 265 | 4.51E-50 | ||
| Pfam | 330 | 458 | 129 | 5.8E-24 | ||
| Gene3D | 382 | 460 | 79 | 2.6E-21 | – | |
| ProSitePatterns | 429 | 441 | 13 | - | ||
| Gene3D | 461 | 580 | 120 | 1.4E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0394950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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