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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0021700 |
| Transcript ID | LotjaGi3g1v0021700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|F4IB81|LYK3_ARATH LysM domain receptor-like kinase 3; TrEMBL-Plants: tr|D3KTZ4|D3KTZ4_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi3g1v0021700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2315182..2322397) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGTGTTAAGTATTAGTTTTTATTGTTAGGCAAATTCTGAATTGAGGAAATGTCCCCCTGCAGGTTCTGTTTTCTCTG TTTTCAGTAGCAGAGTGGGTTGCACTTTGCAGCCTCTTCATTATTTTCTTCTTCCATCCTTCTCTTGGCAGTATACTCTT CATTGCTTCCCCATTTGACTCCAGTCACCCACATAGTCCCTTCAAGTATCTTTCTTCTGATATGTAAACTTCTCTACAGT TTTTTGCTCAATATATTGTTATCTTTGATCAGATTGTTCAAGTATAGAACAAAATCAGTTCTTTAAGTTGGAACTGTACC TCCATCAGATTTTGATATCTTAGTTTCAAGTTTATGCTTAATTTGGATGGTTTTCCTCAATTGAATTAGTTGCCTTCCAA CTTAAATCATTTTCCATCCCTTCAGTTCACAGTATCAGTGGTTCCATGCTTCCATTATTTTCTTTGATCCTCAGCTCAAT TTATTGTCATATATTGCATCCACTGACATAGTAAAATTCTGTCCTTTTGCAACCAAAGCAATGTATCTTACACAGAAACC ATGTCTGAAGTTGCTACTGCACTTCCCTATCTTTCTGCTTCACTTTTACAGCATCTATTCTTATCCCACACCCATGAACT GCACCGACTCAACCCGCGTCTGCACTTCTTTCTTGGCCTTTAAGCCTCAACCAAACCAGACCTTAGCAGTGATAGAGAGC ATGTTTGATGTTTTGCCTGGTGACATCACTGTTGAAGGCAATGGCTGGGGTTACACATTCATCAGAAAAAACTGTTCTTG TGCTGCTGGGATTAAAAAATATGTTTCTAACACCACATTCACAGTGAAATCCCATGGAGGGTTTGTGACTGACATGGTGA TGGATGCCTATGATGGGCTTGTTTTCTTGCCCAACACGACGACACGCTGGGCAAGAGAAGGTTCTGTGGTGCCTCTGAGC TTGTTCTGTGGCTGCTCCAGTGGACTGTGGAATTATTTGGTGAGTTATGTGATCAGAGATGGGGACAGTGTTGAATCTTT GGCAAGTAGGTTTGGGGTTAGTATGGATAGCATTGAGACAGTGAATGGCATCAGCAATCCTGATAGTGTCATTGTTGGCT CTCTTTACTATATACCTTTGAATTCAGGTTAGCCTTTGCAATCTTCTTCAACCCTTTTCTTCAACCTATGCTTGTATGGT CAATCAGGTTGTTTTAGGCCTTCGGCAATCAGCGTAAAGCTGACTGATATCAGTAATATGGATCAGTGGTCCATATAGCT GACTTCACCTAATGGGATAAACTGATAAAGATTTTGTTGTTCTTGTCATCGTTGTTGTTGATGCATTAGTTCTATTCAAA ATTTGGGCTGTTTATAGCAATTTATGTTCTGTAGTTGAGATTTGGAAATCAGTGCCGAAAATGCAATATTGAATTATTTA ACTGCATTGCAGTTCCTGGTGAGCCTTATCACCTGAAGAATGATACTTCTCCGGTTCCTGTTCCTTCACCATCTGTTGAT AATTTTTCAGGTATGGTTCAGCATGTAATATAGAAAAGGATTTTTTTTCCTTTAGTTTGGAGCTACTAGTTTTTCAGTTG TATCTCTACCTTTATACATACACAAATTTGTATAGGTTGAAGTTTTGTTTGCAAGTATATTATTTTATCTTGTGCTTTTG GTTTAATCTTATTCTTACTGATGTCTTTGAACTCTGAAATCCCAAAGGAAAAATGACTTGACAAAAAACAATATACTGTG GTGTAGAAATTTAATATTTTAAACAGCATATTGCCAAATTCTGCATTTGTTAACTGGTATTTAGTTTGGGACAATGATAT CATATGATATTGATACACCATTTCTGTTACACAATTCTTATCCCACTTCCTTTTTGTTTTCTCTTAAACAAGATTGAGCT CAAGAAATAGTGTAAAATAATTATGAGAAAAAAAATCATTCTTCTGTTACTAAGAGTCAAACATTTAGATGCCAAACTAA AAGTTATTTTTGCAGTAATTGAACATGTAACCCATTTTTTACAGCTGATGATATCAACCGTAAAGCTCACGTACCCTATG GATTGATCATGGGAGGTATAGGGGTTGGTCTTGCACTAATAATTATAAGCATGATACTGTGTGTGTTCCTGAGATCATCA AATTGTTTAGTTGAAGCCAGAAATCAAGCAAAGGTTGCTGAGGGTAATATCTCTCATAAGCTCCATAGGAGTCCAATTTT GTTTTGTGGGCCTGGAAGATTCATATGCTGCAAACCTGTAGACCAAACTGATGGTGAATCCAGCAGTGACCAAATTACTG CTCCTAAACCTTCAAGTAATCAATCTAATTATCTATTTGCATGTACTTTATTGAGCAAAAATATGCATACTTATAATGGC AATCAAAATTATAAACTCAAGTCAAATATACTTGTGCTAAGACTATAAGATGTGTTTTAAGCTAAAATCTGCTTGTAATT GATAAACTGGGAATGGGGGAGAGACTGTGATTTGTACTTTAAACTAAAATCTGTGTATAAATAATATACGATTTTTGCTG TTGCAGCTCTAATGCCAGAAGTTTTTAACATGGATAAGCCAGTAGTTTTTACATATGAAGAGATTTTTTCCTCAACTGAT GGTTTCTCAGATTCAAATCTTCTTGGCTACAAAACATATGGTTCTGTTTACTATGGTCTCCTTCGTGACCAGGTTTGTGG CTGTATACTTCTAAGTTCTAAGTCAGACAAGTGCTTCGCAAGAAGAAAAAAAAATGTACATGTCAATCATTATTCTGATA TTGTTTTTGGTATGTATTTTAAATCCTTTAGGAAGTTGCCATTAAGAGAATAACAGCTACTAAAACCAAAGAATTTATGT CAGAGATGAAAGTTCTGTGCAAGGTCCATCATGCTAATCTGGTAATTTCTTTGCTGTTAAAAATAAATTTCATATGCTTT GATTTTGGAGTTAATTCCTTGCAGCTTTTCAAGAGTTTGAGTCCTATTTTGTAATTAATTTTGTCAAGGTAGAATTCATC GGCTATGCGCCTAGTCATGATGAGGTTTTCCTTGTTTTTGAATATGCTCAGAAAGGTTCACTCAGTAGCCATTTGCATGA TCCTCAGAATAAGGGTAAGGTCATGCCTCTGCTTTGGTGTGTTCAATACATATGTATAAATATGTATGTCTGTTAGCATG TTTGTATCAGCTCCTCTTTCCTCAAAGGAATTATGACACGCAGAAGCTATTCAGAGAAGCTTTATCCTTATTTATGAATA TGTGTGTCTTGCATGAACAATCTATGCATATGTATAGAGTTCAAGAGAATCAAGACCTTTCTGCTTCTGTGTTGCTTATA GGTCATTCATCACTTTCTTGGATCACAAGGGTTCAAATTGCACTTGATGCTGCTAGGGGCCTTGAATACATACATGAGCA CACAAAAACTCGTTACGTCCATCAAGATATCAATACAAGCAACATTCTTCTTGATGCTTCCTTCAGAGCCAAGGTAATAA CAAATTTAGACAATATTAAATTATTTCTGAATGTTTTCACAGATTGGTTGATTGCCATAATTCTCTCTATAGATATCAGA TTTTGGGTTAGCAAAACTTGTTAGTGAAACAATTGAGGGAGGAACCACAACAACCAAAGGTGTTAGTACATATGGATATC TTGCTCCTGAGTATGTCCCTTTTGCATTTACAAAACCATTACTTATATACAGAAAGAGAAAAATATGAATGGTTGTTTTA CTTTGTAATATTTTGCAGATACTTGAGCAATCGCATTGCGACGTCCAAAAGTGATGTCTATGCATTTGGTGTTGTTCTTT ATGAGATTATTTCAGGGAAGAAAGCCATTATTCAAACACAAGGTACACAAGGTCCTGAAAGACGATCATTGGCATCTATA GTAAGTTTTCCTTACTTGAAAGACATGACATGATTGTTCAAAGGCGATGTGTCCTTAGATTGGTTAATTAAGCGTGTGTT TCGACTTCCATTGAATTTAACGTCGACCAAAAGATACACTTTGTGGTTTGGTGTTGCAAGTTGCAACATTTTTTGTGTCA TTACCTTAAGATTTGTTAAATTGCAGATGTTGGAAGTTCTTAGGACCGTACCTGATTCATTGAGCACGCCAAGCATTAGA AACCACGTTGATCCTATCATGAAGGATCTGTATTCCCATGATTGTGTATTGCAGGTAAGATGATTTCTCTATCTTCAACT GTAAGTTTGTAGTTGAGGATAATTCCACCTTTCACTCAGGAAAATTGAAGGTTTGTCCAGATTAGAGCCTAATTCCACCT TTCACTCTATCTCGTGGTCTGATATTTGTTAGTGTGAAGAAAATAACCAATTCCATAGATTCTGAAGTAGGGAAAACATG TTGCACGATGTTCAAGTTGGATTGAGATCAGCTGTCTCCAATTGGTGTCTCATTTCATATCTCAACCAATGAAATTATAA CATGTCAATTAACGCTGTCTCATTTCATATCCCAACCAATGAAATTATAACATGTCAATTAACACGGTCTTTTGTTGTTA TGTTATATGCTTAGATGGCCATGCTGGCAAAGCAATGTGTGGAGGAGGATCCCATTTTACGTCCTGATATGAAGCAAGTT GTGCTTTCCCTGTCCCAGATCCATCTTTCTTCTTTTGAGTGGGAAGCCACTCTAGCTGGGAAAAGCCAGGTTTTCAGTGG GCTTATTCAGGGAAGATAGGTTATGCAGCAAGATCTCTCTCATCCACTATACTCAACAAGATTCTTTCTCCATTGTACTA TTCTAGTGGAACGGAATATATAATGTGAACATACTTTTAACCAATTCATAAGAAGAGTTCATTCATTTTTTATCTTGAAG AGCAACGTGATAAACAAACACACCCTAAAACTTGATATTGGAGTCACTTACAATTCAGAAGAGTTCATTCACTTTTCATA CTCATCTTCTTTCTAAATGCTTACATATTATTTCATGGTTCAGCTATTCCTGCTAAAGAAAGCAGTTATTGTTTCCATTA ACTTAGTATCTGTATATACATCTTCAAATTAATGTGACATTACAAATACAACTTAGAATCATAGGCAGTATAGAAACCTG TGAAGCATTCTAGCTGCCTGAAATGTAGTACAAGTAACCCTTCCCTTATCTTACCGAGAAGCTGGGAATCTACTATGCCT AGTTTGGATGGGGAGTGAGTACACAATCCAAGACATGTTCATATCTGAAGTTACATTTTGTAGCTTCTCTCCATAAGTGA TTGTGTGGCCAGAATCGAACACGCTATTACTTGACAAGAGAAGCGAGCACCCTGCGAGGTGGATCAAAGGGTCTTCGAGA ATGAAGGACGGCCCAATTATCAAGCAACAAAACGTCCCCTTTTCGCCAAGGAATGGCAACAGATTCCTCCTCCAGTATGT TGAGACAGTCATAGATTATCTCAGCTGGTAATGGCTCACCATCCCCAAAGGTAACAGCCTTAACAGGATCATTTCTTTCA TCCTCCCAGCCCGTGTAAGCAGCCACCATGCTGTTAAACCATATCTTGCGTTTTCTCATCTCATCATACTTCACAGCTGG GATTGGACCCATAATTGATTTCACCCCATCTTCCAACCACTCCAGCTTCATGCCCAGTTTAGCAGCCCTGCAATACAAAA ATTCAAATTAAACTAGATACACACTCACTCACTGAACAACAGTATGCAATTTTTTCACATAGAATAAGAGAATTGAATAA AATATTCAGCATCTAAGAACAAAGAATAGAGCAAACCACCCTTATCTTCAACTTAATTCTTAACAATCCCAATTTTCAAA CACTACAACAAGGTACATTTCATTTTTCTCTCTTCTCTTTTCCTTTCATATCGCATCATATATCAGATATATCCTTTTTC ATTATTTTCTTTCACTCTCCTAATTAGAATGTGCAGCACAAAACAACATTTTTTTTATATTCAGATGAGCAGATTGTGAG CTATAATTCACTCACACTCATAATTTCCCACTTCATTTCCAACTTTGATTTCTATCTATCTCTTTCTTATCTTTCAATCA TATCACTTATCAAATCTCTTACTTTCTATCTCTTTCCTTCCAATTTCTCTTTTCTCCACCTCATTTCTACTTAAAAGTAT GATGAAACTCTTCCTATATTGCATAGTAAATGAACTTCTTAAGGTTTTGTGACACCCAAACAACAACAATGTTAAATTTT CATATGATTTATTTATCAAATTAATCATTGAGCATATAAAATTATCATCATATCAGACTTTTTAATGATATCACCTCAAC ACTTCAACTAATGTATAAGAAAACTTGGTCAAATTTTAAAATCTTCAAATTACTACTAAGGTGAAAAATGTGATGAGACC CAAGTGGTGCAAAGTTAAGAAGCAGAAACCTTTCTTCAGCGACGGCCTTGTCATCAGTCAAGAACGTTGATTTCCAGCCT CTACCAATGGGAGAAGAAGGGTCATCACCTTCACCCAAAACCCTAACATACAGCAAACCATGCTTCTCCAATCTCTCTAC AAATTCAGGATACTTCTCATTCATCCTCTCATAGACAACATGGCTGAGCACAATCGGAGTTTCACCGCCGACACGCGGCT CCACCTCACAGAAGAAGAACAATTTCGAAGGGAATTCAGGGACCTGAGCCATCTCATGGTGGAAGGGGATTTTCTGGTCG GGTGGGGATTCGTTGGCGGTGAAGACGCGGCCGACGACGTTGGTGCGCGGGGCGGCGCCGCCGACGTAGGGAAGCTCTTC ATACCCGAAGGCCTCGACGAGGTCGTTGAAGTGGGAGGCCGTGTGGAGTGGGAAGTTTCTGAGAAGGACGGCGCCGGATT GGTGGAGGAGTGATTCGAGGTAGGGTTTGTGGGTTTTGATTGACTGTGTTGCGGAGAGAGGAACCGCAGTTGCGGTGGCC GGAGAAGGTGATACTGCGGCGGGGAATGGAGCTCCGGTGAAAATTTTCTGCTGTGGAATTTGGATTTCTATGATTTGTTC TCCTCCTATGGCCATGGTTTTGCAGTGAGTGAATCAATCGAGTGAGATTAGATTAGAGTGTTACGATCATGGATGAAATT CAGATGAGTGTGACCAGGTTCGGTAAGTAAACCAAATGGGCTATGGGCTACCCAAAGAAATACTTGTGGGCTGAGAAAAA TCCATTTTGATTGTTT
CDS sequence (LotjaGi3g1v0021700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATCTTACACAGAAACCATGTCTGAAGTTGCTACTGCACTTCCCTATCTTTCTGCTTCACTTTTACAGCATCTATTC TTATCCCACACCCATGAACTGCACCGACTCAACCCGCGTCTGCACTTCTTTCTTGGCCTTTAAGCCTCAACCAAACCAGA CCTTAGCAGTGATAGAGAGCATGTTTGATGTTTTGCCTGGTGACATCACTGTTGAAGGCAATGGCTGGGGTTACACATTC ATCAGAAAAAACTGTTCTTGTGCTGCTGGGATTAAAAAATATGTTTCTAACACCACATTCACAGTGAAATCCCATGGAGG GTTTGTGACTGACATGGTGATGGATGCCTATGATGGGCTTGTTTTCTTGCCCAACACGACGACACGCTGGGCAAGAGAAG GTTCTGTGGTGCCTCTGAGCTTGTTCTGTGGCTGCTCCAGTGGACTGTGGAATTATTTGGTGAGTTATGTGATCAGAGAT GGGGACAGTGTTGAATCTTTGGCAAGTAGGTTTGGGGTTAGTATGGATAGCATTGAGACAGTGAATGGCATCAGCAATCC TGATAGTGTCATTGTTGGCTCTCTTTACTATATACCTTTGAATTCAGTTCCTGGTGAGCCTTATCACCTGAAGAATGATA CTTCTCCGGTTCCTGTTCCTTCACCATCTGTTGATAATTTTTCAGCTGATGATATCAACCGTAAAGCTCACGTACCCTAT GGATTGATCATGGGAGGTATAGGGGTTGGTCTTGCACTAATAATTATAAGCATGATACTGTGTGTGTTCCTGAGATCATC AAATTGTTTAGTTGAAGCCAGAAATCAAGCAAAGGTTGCTGAGGGTAATATCTCTCATAAGCTCCATAGGAGTCCAATTT TGTTTTGTGGGCCTGGAAGATTCATATGCTGCAAACCTGTAGACCAAACTGATGGTGAATCCAGCAGTGACCAAATTACT GCTCCTAAACCTTCAACTCTAATGCCAGAAGTTTTTAACATGGATAAGCCAGTAGTTTTTACATATGAAGAGATTTTTTC CTCAACTGATGGTTTCTCAGATTCAAATCTTCTTGGCTACAAAACATATGGTTCTGTTTACTATGGTCTCCTTCGTGACC AGGAAGTTGCCATTAAGAGAATAACAGCTACTAAAACCAAAGAATTTATGTCAGAGATGAAAGTTCTGTGCAAGGTCCAT CATGCTAATCTGGTAGAATTCATCGGCTATGCGCCTAGTCATGATGAGGTTTTCCTTGTTTTTGAATATGCTCAGAAAGG TTCACTCAGTAGCCATTTGCATGATCCTCAGAATAAGGGTCATTCATCACTTTCTTGGATCACAAGGGTTCAAATTGCAC TTGATGCTGCTAGGGGCCTTGAATACATACATGAGCACACAAAAACTCGTTACGTCCATCAAGATATCAATACAAGCAAC ATTCTTCTTGATGCTTCCTTCAGAGCCAAGATATCAGATTTTGGGTTAGCAAAACTTGTTAGTGAAACAATTGAGGGAGG AACCACAACAACCAAAGGTGTTAGTACATATGGATATCTTGCTCCTGAATACTTGAGCAATCGCATTGCGACGTCCAAAA GTGATGTCTATGCATTTGGTGTTGTTCTTTATGAGATTATTTCAGGGAAGAAAGCCATTATTCAAACACAAGGTACACAA GGTCCTGAAAGACGATCATTGGCATCTATAATGTTGGAAGTTCTTAGGACCGTACCTGATTCATTGAGCACGCCAAGCAT TAGAAACCACGTTGATCCTATCATGAAGGATCTGTATTCCCATGATTGTGTATTGCAGATGGCCATGCTGGCAAAGCAAT GTGTGGAGGAGGATCCCATTTTACGTCCTGATATGAAGCAAGTTGTGCTTTCCCTGTCCCAGATCCATCTTTCTTCTTTT GAGTGGGAAGCCACTCTAGCTGGGAAAAGCCAGGTTTTCAGTGGGCTTATTCAGGGAAGATAG
Protein sequence (LotjaGi3g1v0021700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLTQKPCLKLLLHFPIFLLHFYSIYSYPTPMNCTDSTRVCTSFLAFKPQPNQTLAVIESMFDVLPGDITVEGNGWGYTF IRKNCSCAAGIKKYVSNTTFTVKSHGGFVTDMVMDAYDGLVFLPNTTTRWAREGSVVPLSLFCGCSSGLWNYLVSYVIRD GDSVESLASRFGVSMDSIETVNGISNPDSVIVGSLYYIPLNSVPGEPYHLKNDTSPVPVPSPSVDNFSADDINRKAHVPY GLIMGGIGVGLALIIISMILCVFLRSSNCLVEARNQAKVAEGNISHKLHRSPILFCGPGRFICCKPVDQTDGESSSDQIT APKPSTLMPEVFNMDKPVVFTYEEIFSSTDGFSDSNLLGYKTYGSVYYGLLRDQEVAIKRITATKTKEFMSEMKVLCKVH HANLVEFIGYAPSHDEVFLVFEYAQKGSLSSHLHDPQNKGHSSLSWITRVQIALDAARGLEYIHEHTKTRYVHQDINTSN ILLDASFRAKISDFGLAKLVSETIEGGTTTTKGVSTYGYLAPEYLSNRIATSKSDVYAFGVVLYEIISGKKAIIQTQGTQ GPERRSLASIMLEVLRTVPDSLSTPSIRNHVDPIMKDLYSHDCVLQMAMLAKQCVEEDPILRPDMKQVVLSLSQIHLSSF EWEATLAGKSQVFSGLIQGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 11 | 22 | 12 | - | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| Phobius | 28 | 239 | 212 | - | – | |
| PANTHER | 33 | 660 | 628 | 8.0E-279 | – | |
| PANTHER | 33 | 660 | 628 | 8.0E-279 | – | |
| Gene3D | 152 | 208 | 57 | 5.4E-9 | ||
| SUPERFAMILY | 154 | 199 | 46 | 4.19E-7 | – | |
| CDD | 154 | 198 | 45 | 2.29749E-8 | ||
| ProSiteProfiles | 154 | 198 | 45 | 13.183 | ||
| SMART | 155 | 199 | 45 | 2.3E-7 | ||
| Pfam | 156 | 193 | 38 | 4.1E-6 | ||
| TMHMM | 238 | 260 | 23 | - | – | |
| Phobius | 240 | 264 | 25 | - | – | |
| Phobius | 265 | 660 | 396 | - | – | |
| Gene3D | 326 | 423 | 98 | 3.0E-22 | – | |
| SUPERFAMILY | 327 | 632 | 306 | 3.69E-72 | ||
| ProSiteProfiles | 352 | 637 | 286 | 36.57 | ||
| Pfam | 357 | 631 | 275 | 8.9E-47 | ||
| Gene3D | 425 | 647 | 223 | 1.6E-54 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0021700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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