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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0184100 |
| Transcript ID | LotjaGi3g1v0184100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25790307..25792333) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTGGAAGGGCACCGAAGAAAAGTGATAGCACTAGGTACTATGAGATCCTCGGTGTTCCGAAGAATGCTTCTCAGGA TGATTTGAAGAAGGCGTATAAGAAAGCTGCCATCAAGAATCACCCTGATAAGGGCGGTGATCCTGAAAAGGTATCTGATT GTGAAAAATTTCCATTCAATCGTGTTTCAGATTTTGATTGTATAGCATGCAATTTTGTTTCTAGTGTAATCTGATTGATG TATTGGTACTGATGATCTGATTCGGATTTGAATTGTGTTGAATTGATTAATTTAGGGTTCAATGCGAAAGAGTGAGATTG ATTGAATTGGTTATTTGATTGATGGGTTTAGGGTTATGCTAATTTGTGTTTGAATTAGTTAGTTTGTTTAGTGCTTTTTA GATATTGTTAGCTTCAGTGAAAATTTGTGCTGTCAATTGAAACAGAAAGCTTGTTTTTTTAGCTGAATTTTGTGTTTTTT TTGTTGAAAGCTTGATTTTTACCTGAATGTTGTGTTTTTTTTTTGTTGTAGTTTAAGGAGCTGGCGCAAGCTTATGAGGT TTTGAGTGACCCTGAGAAGCGTGAGATATATGATCAGTATGGTGAAGATGCGCTTAAGGAAGGAATGGGTGGTGGTGGCG GTGGCCATGACCCATTCGATATTTTCCAGTCATTCTTTGGTGGAGGCGGAGGCCCATTCTCCGGTAAGGCTTTTTTTGAA TAAGGGGTGTTTTGGCCAATGGTTTTGTTATGTGGGGTTTGTCTTAACAGGGATTGTTGTATGTTTGAACAGGTGGTAGC AGTAGAGGACGGAGGCAGAGACGGGGAGAAGACGTGGTTCACCCTCTGAAGGTCTCTTTGGAGGACCTTTACAGTGGAAC TGCTAAGAAGCTTTCACTCTCAAGGAATGTGTTGTGCTCCAAGTGCAATGGGTGTGTATCTTTCTCTTTGAATTGTTTTG TTGTTCCTTTTTATACAATTAAGATATCTTATGTTGGTGAGTGGCGTTGTCTGTTTTTGATAACAGGAAAGGATCAAAGT CTGGGGCTTCCATGAAGTGTGCTGGTTGCCAGGGTACTGGTATGAAGGTGTCCATTAGGCACCTGGGTCCATCTATGATT CAGCAAATGCAACATCCTTGCAATGAATGTAAGGGAACTGGAGAGACAATCAATGACAGAGATCGATGCCCACAGTGCAA GGGAGAGAAGGTTGTCCAAGAGAAGAAAGTGCTTGAAGTTATTGTGGAGAAGGGAATGCAGAATGGACAGAAGATTACAT TCCCTGGTGAAGCTGATGAAGCGGTATGTTGTTGATCTTAGTGTTACTAACAATGAGGTGGGTTGCTTACTTGTGAGTTG TGACTGATTTTGAGCTATTGTCTTTTGCAGCCGGATACCGTCACTGGGGATATTGTCTTTGTCCTACAACAGAAGGAACA TCCCAAGTTCAAAAGAAAGTCTGAAGATCTTTTTGTTGAGCACACTTTGTCCCTAACTGAGGCTCTATGTGGCTTCCAGT TTGTGCTTACTCACTTGGATGGAAGGCAACTCCTTATCAAATCAAACCCTGGGGAAGTTGTTAAGCCTGGTATGTAAATG TTTTACTTACATCATGTTGGTCGTTGTCTCAAAGTTGCTATGTGATTGAAATTTTGATTTGATTTTTTGCTGTGTTACTG ATATTTTCATTCTTTGGTGTGTAGATTCATACAAGGCTATTAACGATGAGGGGATGCCGGTGTATCAGAGGCCTTTCATG AAGGGAAAACTTTACATTCACTTCACTGTGGAGTTCCCTGAATCTCTGAGTGCTGAGCAGGTTAAGGCTCTAGAGGCTGT TCTGCCACCAAAGCCTTCATCACAGTTGACAGACATGGAGCTGGACGAGTGTGAAGAGACCACACTTCATGATGTCAACA TAGAAGAAGAGACAAGGAGGAGACAGCAAGCTCAGCAGGAGGCGTATGATGAGGATGATGACATGCACGGTGGTGGTGCT CAAAGAGTACAGTGCGCCCAGCAGTGA
CDS sequence (LotjaGi3g1v0184100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGAAGGGCACCGAAGAAAAGTGATAGCACTAGGTACTATGAGATCCTCGGTGTTCCGAAGAATGCTTCTCAGGA TGATTTGAAGAAGGCGTATAAGAAAGCTGCCATCAAGAATCACCCTGATAAGGGCGGTGATCCTGAAAAGTTTAAGGAGC TGGCGCAAGCTTATGAGGTTTTGAGTGACCCTGAGAAGCGTGAGATATATGATCAGTATGGTGAAGATGCGCTTAAGGAA GGAATGGGTGGTGGTGGCGGTGGCCATGACCCATTCGATATTTTCCAGTCATTCTTTGGTGGAGGTGGTAGCAGTAGAGG ACGGAGGCAGAGACGGGGAGAAGACGTGGTTCACCCTCTGAAGGTCTCTTTGGAGGACCTTTACAGTGGAACTGCTAAGA AGCTTTCACTCTCAAGGAATGTGTTGTGCTCCAAGTGCAATGGGAAAGGATCAAAGTCTGGGGCTTCCATGAAGTGTGCT GGTTGCCAGGGTACTGGTATGAAGGTGTCCATTAGGCACCTGGGTCCATCTATGATTCAGCAAATGCAACATCCTTGCAA TGAATGTAAGGGAACTGGAGAGACAATCAATGACAGAGATCGATGCCCACAGTGCAAGGGAGAGAAGGTTGTCCAAGAGA AGAAAGTGCTTGAAGTTATTGTGGAGAAGGGAATGCAGAATGGACAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCG CCGGATACCGTCACTGGGGATATTGTCTTTGTCCTACAACAGAAGGAACATCCCAAGTTCAAAAGAAAGTCTGAAGATCT TTTTGTTGAGCACACTTTGTCCCTAACTGAGGCTCTATGTGGCTTCCAGTTTGTGCTTACTCACTTGGATGGAAGGCAAC TCCTTATCAAATCAAACCCTGGGGAAGTTGTTAAGCCTGATTCATACAAGGCTATTAACGATGAGGGGATGCCGGTGTAT CAGAGGCCTTTCATGAAGGGAAAACTTTACATTCACTTCACTGTGGAGTTCCCTGAATCTCTGAGTGCTGAGCAGGTTAA GGCTCTAGAGGCTGTTCTGCCACCAAAGCCTTCATCACAGTTGACAGACATGGAGCTGGACGAGTGTGAAGAGACCACAC TTCATGATGTCAACATAGAAGAAGAGACAAGGAGGAGACAGCAAGCTCAGCAGGAGGCGTATGATGAGGATGATGACATG CACGGTGGTGGTGCTCAAAGAGTACAGTGCGCCCAGCAGTGA
Protein sequence (LotjaGi3g1v0184100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGRAPKKSDSTRYYEILGVPKNASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE GMGGGGGGHDPFDIFQSFFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYSGTAKKLSLSRNVLCSKCNGKGSKSGASMKCA GCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEADEA PDTVTGDIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMPVY QRPFMKGKLYIHFTVEFPESLSAEQVKALEAVLPPKPSSQLTDMELDECEETTLHDVNIEEETRRRQQAQQEAYDEDDDM HGGGAQRVQCAQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 413 | 413 | 2.1E-272 | – | |
| PANTHER | 1 | 413 | 413 | 2.1E-272 | – | |
| SUPERFAMILY | 8 | 106 | 99 | 1.02E-35 | ||
| Hamap | 10 | 364 | 355 | 26.917 | ||
| Gene3D | 10 | 107 | 98 | 1.1E-30 | ||
| SMART | 12 | 66 | 55 | 1.3E-27 | ||
| ProSiteProfiles | 13 | 74 | 62 | 23.324 | ||
| Pfam | 14 | 71 | 58 | 1.2E-22 | ||
| CDD | 14 | 63 | 50 | 2.1482E-11 | ||
| PRINTS | 15 | 33 | 19 | 1.2E-22 | ||
| PRINTS | 46 | 66 | 21 | 1.2E-22 | ||
| ProSitePatterns | 51 | 70 | 20 | - | ||
| PRINTS | 66 | 85 | 20 | 1.2E-22 | ||
| CDD | 114 | 341 | 228 | 3.71461E-44 | – | |
| SUPERFAMILY | 114 | 258 | 145 | 9.81E-17 | ||
| Pfam | 117 | 338 | 222 | 2.8E-40 | ||
| ProSiteProfiles | 130 | 214 | 85 | 24.31 | ||
| SUPERFAMILY | 140 | 212 | 73 | 3.14E-17 | ||
| Pfam | 143 | 209 | 67 | 5.3E-15 | ||
| CDD | 143 | 209 | 67 | 5.89386E-20 | ||
| Gene3D | 145 | 209 | 65 | 1.2E-21 | – | |
| Gene3D | 257 | 339 | 83 | 1.4E-25 | – | |
| SUPERFAMILY | 260 | 349 | 90 | 4.32E-20 | ||
| MobiDBLite | 373 | 413 | 41 | - | – | |
| MobiDBLite | 373 | 403 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | ||
| Molecular function | Heat shock protein binding | Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi3g1v0184100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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