Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0184100 |
| Transcript ID | LotjaGi3g1v0184100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2VJQ1|A0A0D2VJQ1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25790307..25792333) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTGGAAGGGCACCGAAGAAAAGTGATAGCACTAGGTACTATGAGATCCTCGGTGTTCCGAAGAATGCTTCTCAGGA TGATTTGAAGAAGGCGTATAAGAAAGCTGCCATCAAGAATCACCCTGATAAGGGCGGTGATCCTGAAAAGGTATCTGATT GTGAAAAATTTCCATTCAATCGTGTTTCAGATTTTGATTGTATAGCATGCAATTTTGTTTCTAGTGTAATCTGATTGATG TATTGGTACTGATGATCTGATTCGGATTTGAATTGTGTTGAATTGATTAATTTAGGGTTCAATGCGAAAGAGTGAGATTG ATTGAATTGGTTATTTGATTGATGGGTTTAGGGTTATGCTAATTTGTGTTTGAATTAGTTAGTTTGTTTAGTGCTTTTTA GATATTGTTAGCTTCAGTGAAAATTTGTGCTGTCAATTGAAACAGAAAGCTTGTTTTTTTAGCTGAATTTTGTGTTTTTT TTGTTGAAAGCTTGATTTTTACCTGAATGTTGTGTTTTTTTTTTGTTGTAGTTTAAGGAGCTGGCGCAAGCTTATGAGGT TTTGAGTGACCCTGAGAAGCGTGAGATATATGATCAGTATGGTGAAGATGCGCTTAAGGAAGGAATGGGTGGTGGTGGCG GTGGCCATGACCCATTCGATATTTTCCAGTCATTCTTTGGTGGAGGCGGAGGCCCATTCTCCGGTAAGGCTTTTTTTGAA TAAGGGGTGTTTTGGCCAATGGTTTTGTTATGTGGGGTTTGTCTTAACAGGGATTGTTGTATGTTTGAACAGGTGGTAGC AGTAGAGGACGGAGGCAGAGACGGGGAGAAGACGTGGTTCACCCTCTGAAGGTCTCTTTGGAGGACCTTTACAGTGGAAC TGCTAAGAAGCTTTCACTCTCAAGGAATGTGTTGTGCTCCAAGTGCAATGGGTGTGTATCTTTCTCTTTGAATTGTTTTG TTGTTCCTTTTTATACAATTAAGATATCTTATGTTGGTGAGTGGCGTTGTCTGTTTTTGATAACAGGAAAGGATCAAAGT CTGGGGCTTCCATGAAGTGTGCTGGTTGCCAGGGTACTGGTATGAAGGTGTCCATTAGGCACCTGGGTCCATCTATGATT CAGCAAATGCAACATCCTTGCAATGAATGTAAGGGAACTGGAGAGACAATCAATGACAGAGATCGATGCCCACAGTGCAA GGGAGAGAAGGTTGTCCAAGAGAAGAAAGTGCTTGAAGTTATTGTGGAGAAGGGAATGCAGAATGGACAGAAGATTACAT TCCCTGGTGAAGCTGATGAAGCGGTATGTTGTTGATCTTAGTGTTACTAACAATGAGGTGGGTTGCTTACTTGTGAGTTG TGACTGATTTTGAGCTATTGTCTTTTGCAGCCGGATACCGTCACTGGGGATATTGTCTTTGTCCTACAACAGAAGGAACA TCCCAAGTTCAAAAGAAAGTCTGAAGATCTTTTTGTTGAGCACACTTTGTCCCTAACTGAGGCTCTATGTGGCTTCCAGT TTGTGCTTACTCACTTGGATGGAAGGCAACTCCTTATCAAATCAAACCCTGGGGAAGTTGTTAAGCCTGGTATGTAAATG TTTTACTTACATCATGTTGGTCGTTGTCTCAAAGTTGCTATGTGATTGAAATTTTGATTTGATTTTTTGCTGTGTTACTG ATATTTTCATTCTTTGGTGTGTAGATTCATACAAGGCTATTAACGATGAGGGGATGCCGGTGTATCAGAGGCCTTTCATG AAGGGAAAACTTTACATTCACTTCACTGTGGAGTTCCCTGAATCTCTGAGTGCTGAGCAGGTTAAGGCTCTAGAGGCTGT TCTGCCACCAAAGCCTTCATCACAGTTGACAGACATGGAGCTGGACGAGTGTGAAGAGACCACACTTCATGATGTCAACA TAGAAGAAGAGACAAGGAGGAGACAGCAAGCTCAGCAGGAGGCGTATGATGAGGATGATGACATGCACGGTGGTGGTGCT CAAAGAGTACAGTGCGCCCAGCAGTGA
CDS sequence (LotjaGi3g1v0184100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGAAGGGCACCGAAGAAAAGTGATAGCACTAGGTACTATGAGATCCTCGGTGTTCCGAAGAATGCTTCTCAGGA TGATTTGAAGAAGGCGTATAAGAAAGCTGCCATCAAGAATCACCCTGATAAGGGCGGTGATCCTGAAAAGTTTAAGGAGC TGGCGCAAGCTTATGAGGTTTTGAGTGACCCTGAGAAGCGTGAGATATATGATCAGTATGGTGAAGATGCGCTTAAGGAA GGAATGGGTGGTGGTGGCGGTGGCCATGACCCATTCGATATTTTCCAGTCATTCTTTGGTGGAGGCGGAGGTGGTAGCAG TAGAGGACGGAGGCAGAGACGGGGAGAAGACGTGGTTCACCCTCTGAAGGTCTCTTTGGAGGACCTTTACAGTGGAACTG CTAAGAAGCTTTCACTCTCAAGGAATGTGTTGTGCTCCAAGTGCAATGGGAAAGGATCAAAGTCTGGGGCTTCCATGAAG TGTGCTGGTTGCCAGGGTACTGGTATGAAGGTGTCCATTAGGCACCTGGGTCCATCTATGATTCAGCAAATGCAACATCC TTGCAATGAATGTAAGGGAACTGGAGAGACAATCAATGACAGAGATCGATGCCCACAGTGCAAGGGAGAGAAGGTTGTCC AAGAGAAGAAAGTGCTTGAAGTTATTGTGGAGAAGGGAATGCAGAATGGACAGAAGATTACATTCCCTGGTGAAGCTGAT GAAGCGCCGGATACCGTCACTGGGGATATTGTCTTTGTCCTACAACAGAAGGAACATCCCAAGTTCAAAAGAAAGTCTGA AGATCTTTTTGTTGAGCACACTTTGTCCCTAACTGAGGCTCTATGTGGCTTCCAGTTTGTGCTTACTCACTTGGATGGAA GGCAACTCCTTATCAAATCAAACCCTGGGGAAGTTGTTAAGCCTGATTCATACAAGGCTATTAACGATGAGGGGATGCCG GTGTATCAGAGGCCTTTCATGAAGGGAAAACTTTACATTCACTTCACTGTGGAGTTCCCTGAATCTCTGAGTGCTGAGCA GGTTAAGGCTCTAGAGGCTGTTCTGCCACCAAAGCCTTCATCACAGTTGACAGACATGGAGCTGGACGAGTGTGAAGAGA CCACACTTCATGATGTCAACATAGAAGAAGAGACAAGGAGGAGACAGCAAGCTCAGCAGGAGGCGTATGATGAGGATGAT GACATGCACGGTGGTGGTGCTCAAAGAGTACAGTGCGCCCAGCAGTGA
Protein sequence (LotjaGi3g1v0184100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGRAPKKSDSTRYYEILGVPKNASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE GMGGGGGGHDPFDIFQSFFGGGGGGSSRGRRQRRGEDVVHPLKVSLEDLYSGTAKKLSLSRNVLCSKCNGKGSKSGASMK CAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEAD EAPDTVTGDIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMP VYQRPFMKGKLYIHFTVEFPESLSAEQVKALEAVLPPKPSSQLTDMELDECEETTLHDVNIEEETRRRQQAQQEAYDEDD DMHGGGAQRVQCAQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 415 | 415 | 2.0E-273 | – | |
| PANTHER | 1 | 415 | 415 | 2.0E-273 | – | |
| SUPERFAMILY | 8 | 107 | 100 | 3.93E-36 | ||
| Gene3D | 10 | 109 | 100 | 7.6E-31 | ||
| Hamap | 10 | 366 | 357 | 26.942 | ||
| SMART | 12 | 66 | 55 | 1.3E-27 | ||
| ProSiteProfiles | 13 | 74 | 62 | 23.324 | ||
| Pfam | 14 | 71 | 58 | 1.2E-22 | ||
| CDD | 14 | 63 | 50 | 2.15933E-11 | ||
| PRINTS | 15 | 33 | 19 | 1.2E-22 | ||
| PRINTS | 46 | 66 | 21 | 1.2E-22 | ||
| ProSitePatterns | 51 | 70 | 20 | - | ||
| PRINTS | 66 | 85 | 20 | 1.2E-22 | ||
| SUPERFAMILY | 116 | 260 | 145 | 9.81E-17 | ||
| CDD | 116 | 343 | 228 | 3.87562E-44 | – | |
| Pfam | 119 | 340 | 222 | 2.9E-40 | ||
| ProSiteProfiles | 132 | 216 | 85 | 24.31 | ||
| SUPERFAMILY | 142 | 214 | 73 | 3.14E-17 | ||
| Pfam | 145 | 211 | 67 | 5.3E-15 | ||
| CDD | 145 | 211 | 67 | 5.96577E-20 | ||
| Gene3D | 147 | 211 | 65 | 1.2E-21 | – | |
| Gene3D | 259 | 341 | 83 | 1.4E-25 | – | |
| SUPERFAMILY | 262 | 351 | 90 | 4.32E-20 | ||
| MobiDBLite | 375 | 405 | 31 | - | – | |
| MobiDBLite | 375 | 415 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | ||
| Molecular function | Heat shock protein binding | Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi3g1v0184100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…