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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0197100 |
| Transcript ID | LotjaGi3g1v0197100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lectin receptor-like kinase; TAIR: AT5G01550.1 lectin receptor kinase a4.1; Swiss-Prot: sp|Q9M020|LRK63_ARATH Lectin-domain containing receptor kinase VI.3; TrEMBL-Plants: tr|I1JL89|I1JL89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0197100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28875741..28878049) extracted from Lotus japonicus Gifu genome v1.2.
AACTCCTCACAATTCACTTCCTATAACTATAAGTGTAGTCATATATTTTTTTGGCACTGGATAATTCTTCCCAAGTGCCC AATTGTCATGGCTTCTTATGACTTCCTCTTCTTTCCCATTTTCCTAGTTGCTACCCATGCTTTTGAGTTTCAATTCACTG GATTCAATAACAATGAAATTAGCAACCTCACCCTTGGTGGAGCTTCCAAAATTGTCAAACCCCAAGGTACACTTGAGCTC ACCACTCGAACACACAATACTATAGGCCATGCATTCTACAACAAACCAATTCAAATGTTTGACAAAACAAACAATTCACT TCAATCAAATGTTTCTTCCTTCAGCACATGCTTTGTCTTCTCAATTGTACCCCCACCAGGTTCTTCCCCTGGCGGCTTTG GCCTCACCTTCGCCATAGCTCCCTCGCCGCAACTTCCCGGAGCTTCCGCGGACCATTTCCTTGGCCTCTTCAACTTATCC AATGATAACAATACCTCAAACCACATCTTTGCTGTTGAATTTGACACAGTGAATGGTTACAAAGACTCATCAGACACTGA AGGGAACCATGTTGGAGTGAATTTGAACAGCATGTCCTCAATTATCTCTGAGCCTGTGGCTTACTATGCAGAAGGCACTG ATGCAAGGAAGGAAGATTTCAACATGGAGAAAGCTGATGCTGTTTCTGCTTGGATAGAATATGATGGTGAGACACAAATT TTGAATGTAACAGTAGCCCCTTTTTTAGTACCAAAACCAAGCAAACCTCTTATATCTAAAGTCGTTGATCTTAAGTCTAT CATGAAGGAAGACATGTTTGTTGGTTTCTCAGCTTCAACAGGACAGAGAAAAGCAAGTTCTCATTTTATTTTGGGATGGA GTTTTTCATTGAATGGAGCTGCTCCTCAACTCAACATTTCACAGCTTCCAAATCCACCAAGCAAGGAGAAAGATCCATCC TCATTTCCTTGGGCCAAGGTTGCAATTGGCTTAATCTCTGCTTTGACATTTACCTTGTTGTGTGTTTTATGTTTACTAAC ACTTTACAAGAGATACACGCAATTTGAAACTCTTGAGGACTGGGAGATGGAGTGTCCTCACAGATTCAGATATAAAGATC TTCTCATTGCAACCAATGGTTTCAAAGAGAGCCTGCTAATTGGAGTTGGAGGGTTTGGTTCTGTTTACAAAGGTGTGTTG CCTAGCACAGGAAATGAGGTTGCTGTTAAAAGAATCATGAGCAACCCAATGCAAGGAATGAGGGAATTTGCAGCTGAGAT TGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTCAATCTTCAAGGGTGGTGTAAGAACAAGAATGATCTAATCCTAA TCTATGATTACATTCCAAATGGGAGTCTTGATTCACTTCTATACAATGAAAATCTTGCTTTGGATTGGGATCAGAGGTTT AAAATTCTCAAAGGGGTAGCTGCTGGTTTATTATATCTTCATGAAGAGTGGGAGAAAGTGGTGATTCATAGAGATGTGAA ATCTAGTAACATTCTAATTGATGAGGAATTGAATGCTCGTTTAGGTGATTTCGGGCTAGCGAGGCTTTGTGATCATGATC AAGTGTCACACACAACAAGTGTGGTTGGCACAATTGGGTACATGGCACCAGAGTTAACTAGGACTGCAAAAGCTTCTACA AGCTCTGATGTGTATGCATTTGGGGTTCTGCTACTTGAAGTTGTTGCTGGGAAAAGACCAGTGGGCTCAGGTCAGTTTTT CTTGGTGGATTGGGTTATTGAAAATCTCCAACTTGGTCAGATTCTTAAAGTGGTTGATCCTAACCTGGATTCAGTTTATG ATGAGGAAGAAGTGGAGTTGGTTCTGAAATTGGGTCTCCTTTGCACTCAACAAGGAGCAAGTTATAGGCCAACCATGAAA CAAGTGACTAGGTACCTAAATTTTGATGACCCTCTACCTGATTTTGATTGGAGACACTATGATGATTCTCTGAGCAGCAG AACGAGCTCAAGTTTCTTAGGAGACATGTCTTCATCCTCATACACCTTGTCCTCCATTGGTAGGAGTGCAATATTGTCTA TAGAAACTACTAGATAGCCAAGATTATTTGTCAAGTTTGTTTTGTTCTTTCTTCAAAATAATCCCTTCATTTTTTTGCTC CTCTATAGTTTCAGTATATGCTTTCCAATCTTCCCACAATATAGAGCTTGATGGACCTCTATGATCTTGTACAAAATATT CGTTTGTGTTGAGCAGAAGAGAAAGGGAGATGAACCAAGGAATATTCATGAATACACACATTTTACATG
CDS sequence (LotjaGi3g1v0197100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTATGACTTCCTCTTCTTTCCCATTTTCCTAGTTGCTACCCATGCTTTTGAGTTTCAATTCACTGGATTCAA TAACAATGAAATTAGCAACCTCACCCTTGGTGGAGCTTCCAAAATTGTCAAACCCCAAGGTACACTTGAGCTCACCACTC GAACACACAATACTATAGGCCATGCATTCTACAACAAACCAATTCAAATGTTTGACAAAACAAACAATTCACTTCAATCA AATGTTTCTTCCTTCAGCACATGCTTTGTCTTCTCAATTGTACCCCCACCAGGTTCTTCCCCTGGCGGCTTTGGCCTCAC CTTCGCCATAGCTCCCTCGCCGCAACTTCCCGGAGCTTCCGCGGACCATTTCCTTGGCCTCTTCAACTTATCCAATGATA ACAATACCTCAAACCACATCTTTGCTGTTGAATTTGACACAGTGAATGGTTACAAAGACTCATCAGACACTGAAGGGAAC CATGTTGGAGTGAATTTGAACAGCATGTCCTCAATTATCTCTGAGCCTGTGGCTTACTATGCAGAAGGCACTGATGCAAG GAAGGAAGATTTCAACATGGAGAAAGCTGATGCTGTTTCTGCTTGGATAGAATATGATGGTGAGACACAAATTTTGAATG TAACAGTAGCCCCTTTTTTAGTACCAAAACCAAGCAAACCTCTTATATCTAAAGTCGTTGATCTTAAGTCTATCATGAAG GAAGACATGTTTGTTGGTTTCTCAGCTTCAACAGGACAGAGAAAAGCAAGTTCTCATTTTATTTTGGGATGGAGTTTTTC ATTGAATGGAGCTGCTCCTCAACTCAACATTTCACAGCTTCCAAATCCACCAAGCAAGGAGAAAGATCCATCCTCATTTC CTTGGGCCAAGGTTGCAATTGGCTTAATCTCTGCTTTGACATTTACCTTGTTGTGTGTTTTATGTTTACTAACACTTTAC AAGAGATACACGCAATTTGAAACTCTTGAGGACTGGGAGATGGAGTGTCCTCACAGATTCAGATATAAAGATCTTCTCAT TGCAACCAATGGTTTCAAAGAGAGCCTGCTAATTGGAGTTGGAGGGTTTGGTTCTGTTTACAAAGGTGTGTTGCCTAGCA CAGGAAATGAGGTTGCTGTTAAAAGAATCATGAGCAACCCAATGCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGC TTAGGAAGATTGAGGCACAAGAATTTGGTCAATCTTCAAGGGTGGTGTAAGAACAAGAATGATCTAATCCTAATCTATGA TTACATTCCAAATGGGAGTCTTGATTCACTTCTATACAATGAAAATCTTGCTTTGGATTGGGATCAGAGGTTTAAAATTC TCAAAGGGGTAGCTGCTGGTTTATTATATCTTCATGAAGAGTGGGAGAAAGTGGTGATTCATAGAGATGTGAAATCTAGT AACATTCTAATTGATGAGGAATTGAATGCTCGTTTAGGTGATTTCGGGCTAGCGAGGCTTTGTGATCATGATCAAGTGTC ACACACAACAAGTGTGGTTGGCACAATTGGGTACATGGCACCAGAGTTAACTAGGACTGCAAAAGCTTCTACAAGCTCTG ATGTGTATGCATTTGGGGTTCTGCTACTTGAAGTTGTTGCTGGGAAAAGACCAGTGGGCTCAGGTCAGTTTTTCTTGGTG GATTGGGTTATTGAAAATCTCCAACTTGGTCAGATTCTTAAAGTGGTTGATCCTAACCTGGATTCAGTTTATGATGAGGA AGAAGTGGAGTTGGTTCTGAAATTGGGTCTCCTTTGCACTCAACAAGGAGCAAGTTATAGGCCAACCATGAAACAAGTGA CTAGGTACCTAAATTTTGATGACCCTCTACCTGATTTTGATTGGAGACACTATGATGATTCTCTGAGCAGCAGAACGAGC TCAAGTTTCTTAGGAGACATGTCTTCATCCTCATACACCTTGTCCTCCATTGGTAGGAGTGCAATATTGTCTATAGAAAC TACTAGATAG
Protein sequence (LotjaGi3g1v0197100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASYDFLFFPIFLVATHAFEFQFTGFNNNEISNLTLGGASKIVKPQGTLELTTRTHNTIGHAFYNKPIQMFDKTNNSLQS NVSSFSTCFVFSIVPPPGSSPGGFGLTFAIAPSPQLPGASADHFLGLFNLSNDNNTSNHIFAVEFDTVNGYKDSSDTEGN HVGVNLNSMSSIISEPVAYYAEGTDARKEDFNMEKADAVSAWIEYDGETQILNVTVAPFLVPKPSKPLISKVVDLKSIMK EDMFVGFSASTGQRKASSHFILGWSFSLNGAAPQLNISQLPNPPSKEKDPSSFPWAKVAIGLISALTFTLLCVLCLLTLY KRYTQFETLEDWEMECPHRFRYKDLLIATNGFKESLLIGVGGFGSVYKGVLPSTGNEVAVKRIMSNPMQGMREFAAEIES LGRLRHKNLVNLQGWCKNKNDLILIYDYIPNGSLDSLLYNENLALDWDQRFKILKGVAAGLLYLHEEWEKVVIHRDVKSS NILIDEELNARLGDFGLARLCDHDQVSHTTSVVGTIGYMAPELTRTAKASTSSDVYAFGVLLLEVVAGKRPVGSGQFFLV DWVIENLQLGQILKVVDPNLDSVYDEEEVELVLKLGLLCTQQGASYRPTMKQVTRYLNFDDPLPDFDWRHYDDSLSSRTS SSFLGDMSSSSYTLSSIGRSAILSIETTR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 6 | 656 | 651 | 0.0 | – | |
| PANTHER | 6 | 656 | 651 | 0.0 | – | |
| Phobius | 6 | 14 | 9 | - | – | |
| Gene3D | 15 | 271 | 257 | 2.7E-67 | – | |
| Phobius | 15 | 18 | 4 | - | – | |
| SUPERFAMILY | 18 | 285 | 268 | 7.46E-66 | ||
| CDD | 19 | 270 | 252 | 8.04084E-89 | ||
| Phobius | 19 | 294 | 276 | - | – | |
| Pfam | 20 | 281 | 262 | 5.0E-74 | ||
| Phobius | 295 | 320 | 26 | - | – | |
| TMHMM | 298 | 320 | 23 | - | – | |
| Phobius | 321 | 669 | 349 | - | – | |
| Gene3D | 324 | 428 | 105 | 2.0E-30 | – | |
| SUPERFAMILY | 336 | 631 | 296 | 1.12E-80 | ||
| SMART | 352 | 617 | 266 | 4.2E-39 | ||
| ProSiteProfiles | 352 | 619 | 268 | 39.354 | ||
| Pfam | 355 | 613 | 259 | 6.4E-50 | ||
| CDD | 358 | 618 | 261 | 2.94307E-95 | – | |
| ProSitePatterns | 358 | 381 | 24 | - | ||
| Gene3D | 429 | 621 | 193 | 3.5E-59 | – | |
| ProSitePatterns | 472 | 484 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi3g1v0197100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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