Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0311900 |
| Transcript ID | LotjaGi3g1v0311900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|Q1S5M1|Q1S5M1_MEDTR Cysteine-rich receptor-like kinase; Found in the gene: LotjaGi3g1v0311900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66043526..66047140) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTTCATCACATACACACACATTCTTCTCATTTTTAATTTTTAGCAGCACAAATTATTCAATCCTGTTGAATAATTTT AAGTAATGTTTAATTTTGTGTCTATGTATTATTATAACTCATATATTATGTGCATGGCTCTACCTATGGGAAATTGGAGA TTAAAAAGCTCATTTTCTAGCTTCATGTTCCTCCTTTTTTTCCTCCTGCTCCATTTCACCCCAACAATAACTGCACAATC TCCAATTTACATGTACACTTTTTGCCACAACTCAACAACAGGCAAATCTCCTACCACTTCATACCAATCCAATGTCAACA ACTTCCTCTCATGGGTAACCTCTGATTCCATCACAGGCACAGTATATAACGAAACCATAATAGGCAACAATGGTGATGGT GATGGTGATGCTGCTGTTTATGGGAACTACAATTGCAGAGGAGACCTAAGTGGATATTTCTGCCAATTCTGTCTCACCAC CGCCGCGAGAGAAATCGCGCAACGCTGTCCCAACACTGTCACAGCTATGATATGGTATGACACATGCATCATTCGTTGCT CCAACTACAATTTCTTTGGAAAAATTTCTTTAACGCCGGCATGGAACGTTTCCGGGTCCAAAACCATAAAGGACTCAACA GAGCTTAGGAAAGCACAGGATGACATGAGGGGTTCGATAACAAAACTAACTAACCAGAACCAGAACCAGTACTGGGGAAC TGTTGAGTTTAATTGGACTAACACTGAGAAAAGGTATGGCTTGTTGCAGTGTAGTAAAGACCTTACTAGTCATGATTGCA GACAGTGTTTAGAGACTCTGTTGGATATAGTTCCCCTGTGTTGTGAGACAAAGGTATCATGGGCAATTATGGCACCAAGC TGTGGGATGAAGTTTGATGATTATAGGTTCTACCAGATTACCAATCAGACAGGAACAGGATCCCCTTCTCTTATTCCAAA TCCAGGTACTCTTTCTTAGAAATATAATCATTCATGTGTCGCTTCAAGTCTCAATGGCTGCTGCGTGAGGGAGCGTGTTA TAGTTATAACTATTCATGTGTCACTTAACCAACAACTTAAGCTTTTCGGATAATTGGTTCATGACTCTCTTCAAGATTTT GATGTTTCTGCTTGATTTGTTTTCTATCTGTACTCTTGACTCCAAAAAAAAATTTCAACAAACAATGGCTCTTGCTAAAT ATACTAATTAGCTTTTAACAAATTTGTGTCCTTTTAAAATGTGAAAGAAAAAGAAAAACCATTTTCATCTATGTTATTTT TGCAGCCGAGCATGAAGGTGGAAGAAATACCAAAAACCGGATTATTATCATAGTAAGTGTGTTGGTAGCAGTAGCTCTAC TAATTTGTTGTGTCTATTATTCCTGGAGCAAGAATGGTTTATGTAAAGGTAAAAAAAAATCACAAATTTCATAATCCTGC CTCTGACAATAAGACTATAGTATATCCAAACTTAAACTCCCTAGCTTCCTTGGCAGTTGGATTGCTGTTGAAGACCAATC CTACAGCTTCTAATGATCATGTTCAAAGAGAGGAATCATTGAATGAAGACCTTCCTATAATTCCTTTAGCTGTAATTCAA AAGATAACTAATAACTTTTCAGAGTCATCCAAATTAGGAGAAGGTGGATTTGGACCTGTTTACAAGGTATCAATCAATTC CTTTAGCTATGCATAGTTTGGCTGGCTTTAACATTTTAACTTCTCCTCTTCTTTTTTCTACCTTTTCCTTTTTTTTTTTA TCAGGGTACTCTACCAGATGGGACTGAAATTGCTGTCAAAAGGCTTGCGGAAACGTCTGGTCAAGGTTTAGAGGAGTTCA AGAATGAAGTAATCTTCATAGCTAAACTGCAACACAGAAATCTTGTCAAACTCTTGGGTTGCTGCATTGAGGAAAATGAG AAGATGCTAGTATATGAGTACATGCAAAATTCAAGCCTTGATTTTCACCTATTCAGTACGTTTTGATTTGCTTTCCTGAA ACGATGATATTGTCTGTGCCTTTCTTAGAATAGTAGGTTGCAAAATTTTCTGAAATTACTTATAAATTGACATATTTTGC ATTTTGGGAGATTAATTGAAGACTTGAAGTATCATATCCAGTCATATTTCCTATAACTAAGCAACTATAATGAAAAAAGT GAATAATATATTAGTCTCAACTCTCAATTGGTATTGTTTTCCTAAATAACAGGAATCCAATGTTCATTTGCTTGTCAGAT GAGGAAAAGCAAAAGCAATTAGATTGGAAACTACGACTAAGCATCATCAATGGAATTGCAAGAGGACTACTATACCTTCA TGAAGATTCTCGACTCAGAGTAATCCATAGAGATATGAAAGCCAGCAATGTTCTTCTGGACCATGAAATGAATCCAAAAA TATCAGATTTTGGATTGGCAAAGAAATTTGAAATAGGCCAAAGTCAGAGCAGAACAGAGAGGGTTATTGGCACTTAGTAA GTGTTATTATTGCAACTCTTTCAAGACATGTCACTAGAAAGTTTTACACAACTAACAACTGACAGTGTTATATTAAATTT TACAGCGGATACATGGCTCCAGAATATGCTATGGCAGGCTTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCT TCTATTAGAAATCATTTATGGGAAAAGAAATGGTGAATTCTTTCTTTCAGAACATGCGCAAAGTCTTCTATTATATGTAA GTTTGGTTTTTCTGATATTATCTCAATAACAAATTGATATTAGAAAGAGATAGGACTGTTGAATGAAACAAATTGTTTTA TATTTGTATATAATCTCTAGCATGCTCTTTCAAGTTAGAGCTTTTTATTTTTCCGATGTACCAAAAAAAAAAGTTAGAGC CTTTTATTGGATAGATAATATATAGACACATATCTTGTGCTTAATATGATGCAAGTACCAAATTTTGTTATCATTTAGTC ATAAAGACTAATACAATGTCATGAAGTAACTAATAAAAAAAGTATAGTGTTACATGAATGGATTTTTACATTCTATAACA TATCTAAAAAAAGTTTTTCATATTTTATATGCAGACTTGGAGACTTTGGTGTGAAGGAAAAAGTTTGGAATTGATCGATC CGATAAACAAAGAATCATACATAGAAAGCGAAGTGATGAAGTGCATACACATTGGTTTGTTATGTGTACAAGAAGATGCA GCAGATCGTCCAACCATGTCAACCGTTGTTCTCATGCTTGGGAGTGACACAATGGCCCTTCCTAAACCCAAGCAACCAGC ATTTTCAGTTGGAAGAATGGCCTATGAGGAAGGTCCAACTATTATTAACTCCAAGGATAATTCTGTTAATGATGTAACAG TTAGTATTATTTCACCTAGATAGTTGATTCAACAGGATAAATCTTTTACTATGAACAAGCCCTGCATTTAACACTGTTAT AGGTATTATTCTTTTTTGTTTCCATGTAAAATCAAAGTTTATTCTGAAGGAATATGGTCTTGAGTGTTGGATCATTATCC AATATTGGGTTGTATATGTAAATAATTATGCATTATAGACTGTAAATTTGTGAGACTCAATTTAATGTCACATTATATGA TTTCGGTTAATTGAG
CDS sequence (LotjaGi3g1v0311900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTAATTTTGTGTCTATGTATTATTATAACTCATATATTATGTGCATGGCTCTACCTATGGGAAATTGGAGATTAAA AAGCTCATTTTCTAGCTTCATGTTCCTCCTTTTTTTCCTCCTGCTCCATTTCACCCCAACAATAACTGCACAATCTCCAA TTTACATGTACACTTTTTGCCACAACTCAACAACAGGCAAATCTCCTACCACTTCATACCAATCCAATGTCAACAACTTC CTCTCATGGGTAACCTCTGATTCCATCACAGGCACAGTATATAACGAAACCATAATAGGCAACAATGGTGATGGTGATGG TGATGCTGCTGTTTATGGGAACTACAATTGCAGAGGAGACCTAAGTGGATATTTCTGCCAATTCTGTCTCACCACCGCCG CGAGAGAAATCGCGCAACGCTGTCCCAACACTGTCACAGCTATGATATGGTATGACACATGCATCATTCGTTGCTCCAAC TACAATTTCTTTGGAAAAATTTCTTTAACGCCGGCATGGAACGTTTCCGGGTCCAAAACCATAAAGGACTCAACAGAGCT TAGGAAAGCACAGGATGACATGAGGGGTTCGATAACAAAACTAACTAACCAGAACCAGAACCAGTACTGGGGAACTGTTG AGTTTAATTGGACTAACACTGAGAAAAGGTATGGCTTGTTGCAGTGTAGTAAAGACCTTACTAGTCATGATTGCAGACAG TGTTTAGAGACTCTGTTGGATATAGTTCCCCTGTGTTGTGAGACAAAGGTATCATGGGCAATTATGGCACCAAGCTGTGG GATGAAGTTTGATGATTATAGGTTCTACCAGATTACCAATCAGACAGGAACAGGATCCCCTTCTCTTATTCCAAATCCAG CCGAGCATGAAGGTGGAAGAAATACCAAAAACCGGATTATTATCATAGTAAGTGTGTTGGTAGCAGTAGCTCTACTAATT TGTTGTGTCTATTATTCCTGGAGCAAGAATGGTTTATGTAAAGCTTCCTTGGCAGTTGGATTGCTGTTGAAGACCAATCC TACAGCTTCTAATGATCATGTTCAAAGAGAGGAATCATTGAATGAAGACCTTCCTATAATTCCTTTAGCTGTAATTCAAA AGATAACTAATAACTTTTCAGAGTCATCCAAATTAGGAGAAGGTGGATTTGGACCTGTTTACAAGGGTACTCTACCAGAT GGGACTGAAATTGCTGTCAAAAGGCTTGCGGAAACGTCTGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTAATCTTCAT AGCTAAACTGCAACACAGAAATCTTGTCAAACTCTTGGGTTGCTGCATTGAGGAAAATGAGAAGATGCTAGTATATGAGT ACATGCAAAATTCAAGCCTTGATTTTCACCTATTCAATGAGGAAAAGCAAAAGCAATTAGATTGGAAACTACGACTAAGC ATCATCAATGGAATTGCAAGAGGACTACTATACCTTCATGAAGATTCTCGACTCAGAGTAATCCATAGAGATATGAAAGC CAGCAATGTTCTTCTGGACCATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAAGAAATTTGAAATAGGCCAAA GTCAGAGCAGAACAGAGAGGGTTATTGGCACTTACGGATACATGGCTCCAGAATATGCTATGGCAGGCTTATTTTCAGTG AAATCTGATGTTTTCAGCTTTGGAGTTCTTCTATTAGAAATCATTTATGGGAAAAGAAATGGTGAATTCTTTCTTTCAGA ACATGCGCAAAGTCTTCTATTATATACTTGGAGACTTTGGTGTGAAGGAAAAAGTTTGGAATTGATCGATCCGATAAACA AAGAATCATACATAGAAAGCGAAGTGATGAAGTGCATACACATTGGTTTGTTATGTGTACAAGAAGATGCAGCAGATCGT CCAACCATGTCAACCGTTGTTCTCATGCTTGGGAGTGACACAATGGCCCTTCCTAAACCCAAGCAACCAGCATTTTCAGT TGGAAGAATGGCCTATGAGGAAGGTCCAACTATTATTAACTCCAAGGATAATTCTGTTAATGATGTAACAGTTAGTATTA TTTCACCTAGATAG
Protein sequence (LotjaGi3g1v0311900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFNFVSMYYYNSYIMCMALPMGNWRLKSSFSSFMFLLFFLLLHFTPTITAQSPIYMYTFCHNSTTGKSPTTSYQSNVNNF LSWVTSDSITGTVYNETIIGNNGDGDGDAAVYGNYNCRGDLSGYFCQFCLTTAAREIAQRCPNTVTAMIWYDTCIIRCSN YNFFGKISLTPAWNVSGSKTIKDSTELRKAQDDMRGSITKLTNQNQNQYWGTVEFNWTNTEKRYGLLQCSKDLTSHDCRQ CLETLLDIVPLCCETKVSWAIMAPSCGMKFDDYRFYQITNQTGTGSPSLIPNPAEHEGGRNTKNRIIIIVSVLVAVALLI CCVYYSWSKNGLCKASLAVGLLLKTNPTASNDHVQREESLNEDLPIIPLAVIQKITNNFSESSKLGEGGFGPVYKGTLPD GTEIAVKRLAETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCIEENEKMLVYEYMQNSSLDFHLFNEEKQKQLDWKLRLS IINGIARGLLYLHEDSRLRVIHRDMKASNVLLDHEMNPKISDFGLAKKFEIGQSQSRTERVIGTYGYMAPEYAMAGLFSV KSDVFSFGVLLLEIIYGKRNGEFFLSEHAQSLLLYTWRLWCEGKSLELIDPINKESYIESEVMKCIHIGLLCVQEDAADR PTMSTVVLMLGSDTMALPKPKQPAFSVGRMAYEEGPTIINSKDNSVNDVTVSIISPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 50 | 50 | - | – | |
| Phobius | 1 | 34 | 34 | - | – | |
| TMHMM | 33 | 55 | 23 | - | – | |
| Phobius | 35 | 45 | 11 | - | – | |
| Phobius | 46 | 50 | 5 | - | – | |
| Phobius | 51 | 305 | 255 | - | – | |
| Gene3D | 52 | 163 | 112 | 1.2E-17 | ||
| ProSiteProfiles | 55 | 163 | 109 | 17.512 | ||
| Pfam | 60 | 161 | 102 | 5.5E-15 | ||
| ProSiteProfiles | 169 | 275 | 107 | 17.086 | ||
| Gene3D | 173 | 275 | 103 | 8.3E-14 | ||
| Pfam | 198 | 273 | 76 | 1.3E-7 | ||
| TMHMM | 306 | 328 | 23 | - | – | |
| Phobius | 306 | 327 | 22 | - | – | |
| Phobius | 328 | 697 | 370 | - | – | |
| PANTHER | 334 | 663 | 330 | 1.4E-142 | – | |
| PANTHER | 334 | 663 | 330 | 1.4E-142 | – | |
| Gene3D | 343 | 454 | 112 | 4.9E-39 | – | |
| SUPERFAMILY | 361 | 650 | 290 | 4.32E-81 | ||
| SMART | 379 | 650 | 272 | 1.7E-27 | ||
| ProSiteProfiles | 379 | 665 | 287 | 37.418 | ||
| Pfam | 382 | 648 | 267 | 1.2E-48 | ||
| CDD | 385 | 650 | 266 | 4.7147E-99 | – | |
| Gene3D | 455 | 659 | 205 | 6.1E-58 | – | |
| ProSitePatterns | 500 | 512 | 13 | - | ||
| Pfam | 652 | 697 | 46 | 1.1E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0311900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…