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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0395300 |
| Transcript ID | LotjaGi3g1v0395300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79524419..79531313) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCTT GCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGGTCCGTCCAATCGATTCCCTTTTACCATCTC ATTTATCATCATTATCATTGTTAATTACAACTAATCAATGCAGTTAAACCTGATTTTTGTTTAATTTTTCCATTTCTCGT AAATTTGGAGTTCGTTGATTTAGATTTGTGCGTTACTTTTGATTTTCCAGAGTTCAGGGAAATCTTCAGTGTTGGAGAGC ATTGTTGGGAAGGATTTTTTGCCTCGTGGATCTGGAATTGTTACGCGGAGGCCTCTTGTTTTGCAGCTTCATAAGATTGA TGATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGATTTTGGTATTCTCCTAAACCTACATT CAGTACTGCTATTCACTTTTCACACCCTTATGGTTGTTTTACTTGCATTTAATTATTGATTACACTAAGCATCAGTGCGG TAGACTGGTAGCAACTAGCACTAGCAAGTACATTTAGTATCTCTTTGCTGGAGTTTTCCCCTAATAAATGTTAAAGTGTT CTATGTTGTCAATCCTAAATCTCAGCGCGTAGTGGCCGGGAAAATGAATTTGTCTATATTTTGTATAATTAATCCCATCT ATATATATATATGAAGAAAGGAAGGATCCCAACAAAGAATCGATCTTTCTTTTAGTTGTTGAATCTCTCTTTGATTGATC AATGTGTCATATTTCGAATCCTCATTCCTAATGGAATCGAAATGCTAAATCAATAATAAATTGTACTTGAAATTCATAAC ATATTCATACTTTCATAGCAGTAAACTAGGAATATAAGTCATACTTCTTGAGAGAGCAAGGGCGAAGGGCGAAGAGAGCA GGGGAAGTGAGAAGGGAAATGGGATGGGATGGGACTACAGGATCCCACAGGTGCTTGCCCAGATTGACAACATAGGAAGT GTTACCTAGTTTTTTTAAGGATTTTAATTTATATGCAGTGACTGTGTAGTAAAGAGTTTTAGACATACATTCAATCAAAT CTCTCCATTTTTCATTTTAAATATTTTAAAATTCAAATTTAATTATGACATGGCAAATTGATGAATTCTAATTGAATGAC TGGGTAAGTCTTTGTCAGTCCATGGTAACTAAACTCGTTTTTATAAAAGAAATTAAAATATTGATGATGTGGTTTCACTG GTAGTTACTAGTTTTGCTTGTTATGTAGCTGCTGTAAGACAAGAGATAGCTGATGAGACTGATAGAGAAACAGGTCGCTC CAAGGGTATTTCATCAGTTCCCATCCATCTCAGTATCTACTCTCCTAATGGTGAGATATATATAAATATAGCAATCTAAT TTTATCTTATTGGTAATTAAAATTGTGAGACTAGGAACTTAAAACATGCATAATTTGATTTTGTTTTTTAAGTTTGAATA TATCAGTTGATTATATGTTACTATAACAATCATATTGACTATTGCTGGAACAGTTTTACCAATCACCACTTGCTTGCAAA ATACATAGTATTACAATGACAATTATGTTCTACTCTAGCACATCAATGACATCATGAATGCCCATCAGTCTAATCTTTGT TCTTTTTTGGTCCAAAGTATTGAACACTTTGGTTTTTAAATATTAATGAGTCCTAGTACCAATTTTTTTAAACTAGTATC GAACAACAAGTATTATCTTATAACTGCACCATCTACATGAGTTATTTTTTAAAAAGGCTCTAATCTAAGTATAACTTATT TGTGCTTGTTACTTTTTAAATTGAATGTTCTTGTTTAAGTATCCATTTCATCCATTGAATTTGTTGACTTGGCAGTTGTC AATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGGTGAGGTTTTATTCTAAGATTGGCTTTTTGCTCA GTTAAGTTAAATTTACAAGCACTATTGCATATAGCTATGGAAATTTATGGTATAATGTTGTCTGTTATTGCAGAGGGTCA ACCAGATAGCATTGTGCAAGACATTGAAAATATGGTTCGGGCCTTTATCGAAAAGGTGATTATTCTTATATACAATGAAA TAATCAAGAAAGATGGTGATGCATATGGGAACATTTATTTGTTGTGAGGTGATGAAAATTTAATGAAATGCTTAATGCTT AATGCATATGCTTAATGATTGCCCTGATGATATCCCTCTCTTTCAAATTGCCAATGAGATCAAGGCGCGAAAAGCTTCTC TGCGCCGTTGAGGGTGAGATTTGGGGTGGTGGCGAGTTATGGGCTGTATAGGTTTTTTCCTAGTCCTTTGAGAGTTTTTT GGGTATTGCAAACGACTTTTGGTTTTTGTAGTTGTTGCAATTGCGGCTTCTAGTTTTTGAGGCTATTGTTCTTATTTGCC GCTGTTTTGGGTTGGTTTTTTTTTGTTCTTTTTGGTGGGCAGCCTTGGTCGTGTGGGTTTTTGATACCGTGTTGAGGTTG TTTTGGTGTATATCTTATCAGTTTCCTCATTATTATTATATATATTTTCTCCTTTTGAAAAAAAAAAAAAGTTCAATTGA ATAATGCTCAGGAGACTTAATATTCAATTTTAGACATTCATCCTGAATCCTGATCCAGTTACACTAATAATGTAATGCCT TGCTCTCACTCTAATAATAGTTATACCTTTTTTTTATCTTTGTTCGAGAATCCCCATGGACGTAATTATGAGTCAACTCT CAGTTTAAGGCCCGTGATAATGTAAAACCTTTCCTATTGTAGTGACAAATTTGAACTTCTAACATTGCAATTATATAAAG TTCATCTGGAGTCGCAGTTCACTCCTATTGTGACTTACGAAGGTTGACTTCTAATGATAGTTAAATGTTTTACTATTACT GCCATCACTATCGCTAATCTAATAATAGCCAATTGTTTTGCATTATTTATTTTGCAGCCGAATTGCATCATTTTGGCAAT ATCTCCTGCTAATCAAGACCTTGCTACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGTAAGATGGTGA ACATGATTTTTTCTTAAAAAGTACTGGCAAGAGGAAATAGTGTCATTTGAAGTTAGATGTATTAAGTAATATCATAATTA GCTAAAGCTGAAACAATAGATGTTAAAAATGAAAAACATAGAAGGGTTCATAACATCGTTTGCAAAGCAATTTAAGTTGT ATAGATTGATTATTGTATATTGTATTAGGCTTCTTATACCAATAAATTATCATATTTGTATTGAATATCAAATACAATTT TCTTTATATTATCATATTTGTAGTGAATATCAAATACAATTTTCTTTATATATAATTGTTGGTGTTGGAATAGGTAAATT TTAGTTGATTTAATACCGAAATGTTTCACTGAGATTCTATGCAGTTATTGTCAAAAGAGAAATACTATTAACACACTGTC TACGCATTCTTTGTCATAGAGTGAAATCATGTAGGTTCCATCAAATAACGAGAGGTTCCCAGCCTCCCACCAAATATGGG ATGGAAATCACATGAGTTTCATCTAATAAGAATGTGTTGATCCACCAGATTATTAAATGTATTGAATTGATTTTCTGAGG GAGGAAGTAAATTGTATTGGGCTAGTTCACATCTTTAGAGAAAAAGTATTGTTGCGGACTACCTTGCAAAGAAGGCATGT AATAGAGAAAAGGAAATATGGACACTGTTAGATAGGCACTAAGAGTGGTGCCTCTTGTAAAGCTTTCTTCTGCAAGTTCT TGCTGATATATTTATGAATGAATGTTTCAGTGCTTCAAAAAAAAAAGTGTTGATATGAGTATAGTAGAGACAGTGTATAT TATTGACTATATACAGTGATTTGTATAGATACAATGCAAAAGAGAAAAAGGAAAGTATCGCCCTGATTTTGGAGATATAT TCCTAATATCCTAAGATAACAAATCTTCCTAAAATACGAATATAAACAATTATCTGTCAAATAAATTAGCAACTTAATCA ACTCAAATATTCACACAATCTGGACTACTATGTGGCTGAAAATCACTTGTTTATAAAATTATTTTAATTTTTAGGGGAAA GGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAAGGTACTGATGCAGTTGAAGTAAGCATTCTCTTCCTCCTT TAAATTCAGAAATGGTAGGCTACCGTGCAATGTTTGCCTCAGGCAAAACTCTTTCCTATTTGGTGTCCTTTGACCATGCT TTTGGCATCAAAAGAGTTATTTTTGTACTTTCAGGAATTTAGTATAAAATATAAACTCAGATTACAATATAGAAGTAGGA GTGCAATTATGGTAAACAAATTTCATATAGTTGTCATTTGATGATTAAAACGCATGGTAAACAATTTGGAGTTTTGACAC TTGGGGATATCTACTCACTGAAATGGAGGACCAGGATAATATATCTCGAACTTATTTAGTGACCTTGTTATGGTTTGGCT TATATTTTGCCTTTACATGTCTCAACAGTTGTTTGAAACTTTAGAATAACACAGACAATCCTTTTCTCGGAGTTAAGATT TCCCTATTTGGTTTATTTTCTTTCGTTTATAAGCTTAAATTTCTGGAACTGAACTTTTCAAGTTCATGGAGTGGCTTCCT CTTATGTTTCCTCCCTCCTATTCCTTTTTTCAGATCCTTGAAGGTAGATCATATAAGTTAAATTACCCTTGGATTGGTGT TGTTAATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACGTAGAGAGAATGAGTATTTTGCAA ACACCCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGGTGATGTCTAAGGTATGTGAAATC TTCTATTGACACATTCATTCGGGATGTACATGTTACTTTTTTGCAAAATTGGTCAATTCATTATGGTCCTTTTTTATGTC TTGTTTTCAGCATTTAGAAACTGTTATCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAGT TGGAGACAGAATTGACCCGTATTGGGAAACCTATTGCCGCTGATACTGGAGTAAACCACCTCCTCCGATCTCTCCCCCTT TCTCCCATTTGCTTTTACAAATGCATGAATTATTGATGTTCTTTCTCCATTTATAGGGGAAGTTGTACATGGTAATGGAA ATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATGTATGTTCCTCTTTCCCCTTTTGATGAATTAAC ACGTCATTTTTCATATCAAAAAGATCCGATTTGACCTTGGAAATGATTGAATTTCTACAGACGATCTGGTGGTGAGAAAA TTTACCAAGTATTTGATAATCAATTTCCAGCAGCTCTAAAAAGGCTGCAGTTTGACAAGCATCTATCAATGGACACTGTA CGCAAACTAATAACTGAAGCAGATGGGTATCAACCTCATCTCATTGCTCCTGAGCAAGGATATCGCCGACTTATTGAATC TTGCATAGTATCAATGAGAGGCCCTGCTGAAGCAGCAGTTGATGCTGTATGTATTTTACTAAAATATAAATAAATACTTT GCTATGAGTTACAACTTGTAACATGTTCGTTTAAGAAATTACTTGTGCTAAAATTGTAGCTGACTTCTTCCTCTATTTTT TTGACCTGATTAACTGAAAAATCATATTGACTCTGGCACTATTTAGGCTTAAGAAACATTCGCAAATCTTTACTTGTCAA AGTTGACATCATTTAAGGCAAAAGGTTGAAGTCAATCATTGAGGTGAAATTATTTTCTAATGTTGTGTTATTCATTAAAC TCCTTACTTTTATAATGTTTCAGGTTCATGGAATTCTGAAGGATATGATTCACAAGTCTATGAGTGAGACAATGGCAAGT AGCAAATTGCTTATTTTATGTTAAGTCTATATAGTTCTCTACATGTCTAAGTCTGGAGATAATTTGTATAACTTTAGCTG AATATTCAACTTGGTATATATTTTTTCCAGTGCCTTAATAATTTCAGTTTTATGTTTGATTGTAGGAATTAAAGCAGTAC CCTACCTTGAAAGTCGAGCTCGGAAGTGCAGCTGTTGATTCACTGGAAAGGATGAGAGAAGAAAGTAAGAAAGCAACTCT GCAATTAGTAGACATGGAATGTGGTTATTTGACAGTTGAATTCTTTCGCAAACTTCCTCAAGACGCAGAGAAGGGCGGAA ATCCAACCCACTCACTTTTTGACAGATATAATGATGCTTATCTTCGTCGAATTGGTAAGAAACTAAAATTTAAAATAAAT ATTTTATGCCTATGCTCCTAATAATTGAAATAATAAAGGACTTTGAGTCCATTAGCTACATATTAGAACATATGATATTG AAATTAGAGCTATTGTTTTTCACCCTTTACTGAGATTATTCCTTGTATACAACAGCTACCACTGTCTTGTCATATGTGAA CATGGTATGTGGGAGTCTAAGGCATACCATTCCCAAGTCTGTAGTTTATTGTCAAGTGCGGGAAGCAAAGCGCAGTTTAC TGGATCATTTCTTCACAGAGTTGGGGAAAAAAGAGGTGAGCTTTGTTATTTTCCTTGAAGAATATAGGCATGTCTGGTGA GAATAGGGTGAGCTTAATTTTGCATGATCTACAAATTGTTTTGCAGGGTAAACAACTAGCTGCATTGCTGAATGAGGATC CAGCAATCATGCAGCAAAGGACCTCACTTTCTAAGAGGTTAGAGCTGTATAGAAGTGCCCAATCAGAAATTGAGGCTGTT GCATGGGACAAGTAA
CDS sequence (LotjaGi3g1v0395300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCTT GCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGATTTGTGCGTTACTTTTGATTTTCCAGAGTT CAGGGAAATCTTCAGTGTTGGAGAGCATTGTTGGGAAGGATTTTTTGCCTCGTGGATCTGGAATTGTTACGCGGAGGCCT CTTGTTTTGCAGCTTCATAAGATTGATGATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGA TTTTGCTGCTGTAAGACAAGAGATAGCTGATGAGACTGATAGAGAAACAGGTCGCTCCAAGGGTATTTCATCAGTTCCCA TCCATCTCAGTATCTACTCTCCTAATGTTGTCAATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGAG GGTCAACCAGATAGCATTGTGCAAGACATTGAAAATATGGTTCGGGCCTTTATCGAAAAGCCGAATTGCATCATTTTGGC AATATCTCCTGCTAATCAAGACCTTGCTACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGGGAAAGGA CATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAAGGTACTGATGCAGTTGAAATCCTTGAAGGTAGATCATATAAG TTAAATTACCCTTGGATTGGTGTTGTTAATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACG TAGAGAGAATGAGTATTTTGCAAACACCCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGG TGATGTCTAAGCATTTAGAAACTGTTATCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAG TTGGAGACAGAATTGACCCGTATTGGGAAACCTATTGCCGCTGATACTGGAGGGAAGTTGTACATGGTAATGGAAATCTG TCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATACGATCTGGTGGTGAGAAAATTTACCAAGTATTTGATA ATCAATTTCCAGCAGCTCTAAAAAGGCTGCAGTTTGACAAGCATCTATCAATGGACACTGTACGCAAACTAATAACTGAA GCAGATGGGTATCAACCTCATCTCATTGCTCCTGAGCAAGGATATCGCCGACTTATTGAATCTTGCATAGTATCAATGAG AGGCCCTGCTGAAGCAGCAGTTGATGCTGTTCATGGAATTCTGAAGGATATGATTCACAAGTCTATGAGTGAGACAATGG AATTAAAGCAGTACCCTACCTTGAAAGTCGAGCTCGGAAGTGCAGCTGTTGATTCACTGGAAAGGATGAGAGAAGAAAGT AAGAAAGCAACTCTGCAATTAGTAGACATGGAATGTGGTTATTTGACAGTTGAATTCTTTCGCAAACTTCCTCAAGACGC AGAGAAGGGCGGAAATCCAACCCACTCACTTTTTGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACCACTGTCT TGTCATATGTGAACATGGTATGTGGGAGTCTAAGGCATACCATTCCCAAGTCTGTAGTTTATTGTCAAGTGCGGGAAGCA AAGCGCAGTTTACTGGATCATTTCTTCACAGAGTTGGGGAAAAAAGAGGGTAAACAACTAGCTGCATTGCTGAATGAGGA TCCAGCAATCATGCAGCAAAGGACCTCACTTTCTAAGAGGTTAGAGCTGTATAGAAGTGCCCAATCAGAAATTGAGGCTG TTGCATGGGACAAGTAA
Protein sequence (LotjaGi3g1v0395300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQICALLLIFQSSGKSSVLESIVGKDFLPRGSGIVTRRP LVLQLHKIDDSREYAEFMHLPRKRFTDFAAVRQEIADETDRETGRSKGISSVPIHLSIYSPNVVNLTLVDLPGLTKVAVE GQPDSIVQDIENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVEILEGRSYK LNYPWIGVVNRSQADINKSVDMIAARRRENEYFANTPEYRHLASRMGSVHLGKVMSKHLETVIKSRIPGLQSLINKTIIE LETELTRIGKPIAADTGGKLYMVMEICRTFDQIFKDHLDGIRSGGEKIYQVFDNQFPAALKRLQFDKHLSMDTVRKLITE ADGYQPHLIAPEQGYRRLIESCIVSMRGPAEAAVDAVHGILKDMIHKSMSETMELKQYPTLKVELGSAAVDSLERMREES KKATLQLVDMECGYLTVEFFRKLPQDAEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGSLRHTIPKSVVYCQVREA KRSLLDHFFTELGKKEGKQLAALLNEDPAIMQQRTSLSKRLELYRSAQSEIEAVAWDK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 618 | 618 | 0.0 | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 1 | 618 | 618 | 0.0 | ||
| SMART | 1 | 259 | 259 | 3.6E-110 | ||
| Gene3D | 2 | 327 | 326 | 1.2E-112 | – | |
| SUPERFAMILY | 23 | 316 | 294 | 2.94E-67 | ||
| Phobius | 33 | 51 | 19 | - | – | |
| CDD | 34 | 308 | 275 | 1.59126E-125 | ||
| ProSiteProfiles | 40 | 308 | 269 | 49.122 | ||
| PRINTS | 43 | 61 | 19 | 8.7E-51 | ||
| Pfam | 52 | 221 | 170 | 5.2E-50 | ||
| Phobius | 52 | 618 | 567 | - | – | |
| PRINTS | 68 | 85 | 18 | 8.7E-51 | ||
| ProSitePatterns | 69 | 78 | 10 | - | ||
| PRINTS | 140 | 157 | 18 | 8.7E-51 | ||
| PRINTS | 190 | 208 | 19 | 8.7E-51 | ||
| PRINTS | 209 | 225 | 17 | 8.7E-51 | ||
| Pfam | 230 | 496 | 267 | 5.2E-62 | ||
| PRINTS | 232 | 251 | 20 | 8.7E-51 | ||
| Gene3D | 333 | 584 | 252 | 1.8E-49 | – | |
| SMART | 521 | 614 | 94 | 7.4E-31 | ||
| Pfam | 523 | 614 | 92 | 1.3E-21 | ||
| ProSiteProfiles | 526 | 618 | 93 | 22.321 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0395300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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