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LotjaGi3g1v0406300.1

Overview

Field Value
Gene ID LotjaGi3g1v0406300
Transcript ID LotjaGi3g1v0406300.1
Lotus japonicus genome version Gifu v1.2
Description Receptor kinase; TAIR: AT1G72300.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|Q9C7S5|PSYR1_ARATH Tyrosine-sulfated glycopeptide receptor 1; TrEMBL-Plants: tr|C6ZRX1|C6ZRX1_SOYBN Leucine-rich repeat receptor-like kinase; Found in the gene: LotjaGi3g1v0406300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:80962792..80967377) extracted from Lotus japonicus Gifu genome v1.2.

ATCCACAAAACTCAAATTCGATAAAAGAAAAATTTAAACCAAACAGGTGTAATGTTCCATTGTGGACACAGAACAAAACA ATAACAAAAACAATAAACAACAAATGAAGAATAACAATTATAATAATTAATTAAAAATCCCCATACCCCAGCACCAGCAA CACCACACCACCACCACCAGCAGAAAAAGTAGTGGTAGGTGCTTTTCAGTTTGGTGGCAGCATAGAAGAGGAGGAAGATC TAAAGAGGTATAGCTTTGTTTTTCCCTGTCCATCTTTTCTTGTCTGGTGGAGATGAATCCATTAATCTCCCTCCACACGT TTTCATGTTACTACTACTATATTCATTGATATTGCGATTTCTACTTTATATTTTGTCAATCATGTTCATCATCATCATCA ATATCATCATCATCATCGTCCACTTCTTCTGCCACTACAGGCCGCCCCAAGCAAAACAAACAACAACCTCAAAAGTAAAC GCTCGATTTTATTAATGGGAAGCATCCTCCACTGCTTGCTTTTTTATATTGTATTTATCTCCAGTTGTCAACGTCATCTC CACTTCTCTTCTTCTCTCTCTTCTCAACCCTTCATTTTGCTCGGTCAATGGATGGTCATGCCTACCCATATACCCTTGTG TCCTCCTTCTTCTTCTGCTCTCATGTCACTGTGATCAACACCACCAAAGACTCAATCTTGCCCTTCTGGGTATCTCTAGT TCTCATGAGATCAGCCTCAACCCTATTACCCTCTTTTTCTTGTAAATACAATTACATGGTTTCCAATTTGATTATTCTGC CTTTACTTTTCTCCTTGTTGGTTGTTCAAGCCTCATTAATTTGTAACCAGATTGATAGAGACTCACTCTTGGAATTTTCT GGGAATATATCTATCTCTTCCCCTTACCCTCCTCTCAGTTGGTCTTCTTCTTCTTCTTCCCTTGATTGCTGTGATTGGGA AGGTGTTACTTGTGATGGGGATCAACGTGTTACTCATCTTTTGCTACCATCTAGAGGTCTCTTTGGAGTTATCTCCCCAT CTCTCACCAACCTAGCTGCTCTCTCTCACCTTAATCTTTCTCATAATAGATTATCTGGGAATCTTCAGAGCCAGTTTTTC TCACTGCTGAATCACCTTCTGGTTCTTGATTTGAGCTACAATCGCCTCTCTGGTGAGTTGCCACCCTTTGTTGCTGATAA CAGTACTAGTGTTGTTATCCAGGAGGTGGACTTGTCTAGTAATTTGTTCAATGGAACGCTTCCATCTTCATTGCTTCAGC ACCTGGCAGGAGGGAGTTTGATATCTTTCAATGTCAGCAACAACAGTTTCACAGGCCAAATCCCCACTTCAATCTTTTGC ACCAATGACCGCAACTCGTCGTCTTCTATCAGATTCTTGGATTATTCTTTCAATGATTTTGATGGTGTCGTTCAGCCTGG ACTAGGAGCATGTTCCAATCTGGAGAGGTTTCGAGCAGGTTTCAATTTTCTATCCGGGCCTATTCCTGTTGATATTTTTG ATGCTGTCTCTCTTAAAGAAATATCACTGCCCCTCAATAAGCTCACTGGAAGAATTGGTGATGGCATTGTTAGCCTCACC AATCTCACAGTTTTGGAGCTTTACTCCAATCATTTCACTGGCCCCATTCCGCAGGATATCGGTAATCTTTCCAAATTGGA ACGGTTGCTTCTTCATGTCAACAATCTCACAGGTACTATGCCCCCATCTCTGATGAAGTGTGCCAATCTTGTGGTGTTGA ATTTAAGGGTCAACAAGTTGGAGGGGAATCTCTCAGATTTCAATTTCTCAGGATTCCTCAGACTTGCTACACTTGACCTT GGCAACAATATTTTCACTGGTGTTTTACCACCAACACTTTATGCATGCAAGTCACTTGCAGCATTAAGGCTAGCATCTAA TCAACTTGAGGGGCAGGTTTCCCCCGCGATACTTGGACTTGAGTCTCTTTCTTTCCTATCAATATCCACTAACAAGCTGA GGAATATAACTGGTGCTCTGAGAATTCTGACAGGGCTCAAGAAGCTTAGTACCCTTATGCTGTCCAAGAATTTTTTGAAT GAAATGATGCCACAGGATGTAAACTTAACAGGACAAGATGGATTCCAAAAGCTGCAGGTTCTCGGCTTGGGTGGTTGTCA ATTTACTGGTCAAATACCAGGCTGGCTAGCAAACCTGACGAAGATTGAGGCCATGGACCTGTCCTTTAATAAGTTTAGTG GTCCAATTCCTCCTTGGTTGGGTGCACTTCCTCAGCTTTTTTACATAGACTTGTCTTTTAACCTCCTTACCGGAACATTT CCGACGGAGCTGACAAGACTCCCAGCACTAACATCACAACAGGCAAATGATAAAGTAGAAAGGACTTACTTGGAGTTACC TGTGTTTGCTAATGCCAACAATGTTTCCCTATTGCAATACAATCAGCTTTCTAGCCTTCCACCAGCATTGTATCTCAAAA ACAATCGCCTTAGCGGCAGTATCCCGATTGAGATTGGCCAACTGAGTGTCCTTCATCAGCTGGACCTGAAGAACAACAAC TTCTCCGGCAATATACCGGTTCAAATTTCAAACTTGACCAATTTAGAGACACTAGACCTCTCAGGAAACCACCTATCTGG TGAAATTCCTGATTCACTCAAAAGATTGCATTTCTTGTCCTTTTTCAGTGTAGCATTCAATGATCTTCAAGGACAGATAC CAACCGGTGGTCAATTTGATACTTTCTCCTTTTCCAGCTTTGACGGAAACACACAATTGTGTGGTTCAGTTATTCAGCGC TCTTGTCCTTCTCAACAAAATACTAACAGTGCTGCAGCTAGTGGCAGTTCAAACAAAAAGGTATTGATTGGAATTATTAG TGCAGCTTGCTTTGGCTTTTCTTCCTTGGTGACCTTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAGGAG CAGCTTCTGACAAGATTGAACTGGAATCAATTGCTACCTACTCCAACAATGGGGTTTATCCTGAGATTGACAACGAGGCT AGCCTAGTGGTCTTGTTCCCCAACAAAACTAATGAAACCAAGGATCTTACAATATTTGAGATCATAAAGGCCACTGAGAA TTTCAGTCAATCAAACATCATAGGATGTGGGGGTTTCGGTTTGGTTTATAAAGCAACATTACCGAATGGGACTAATCTAG CCATCAAGAAACTTTCAGGAGATTTGGGCCTTATGGAAAGGGAATTTAAAGCAGAAGTTGAGGCTTTGTCAACAGCACAA CATGAGAATCTAGTGTCATTGCAAGGCTACTGCGTGCACGGTGGTTTCCGCCTTCTCATATACAACTACATGGAGAATGG AAGTCTGGATTACTGGTTGCATGAAAAGGCTGATGGTGCATCACCGCTTGATTGGCCAACTCGTTTGAAGATCGCACGAG GAGCAAGTTGTGGTTTGGCTTATCTGCATCAGATATGTGAACCGCACATCGTGCATCGCGATATAAAGTCAAGCAATATA CTCCTTAATGAAAAGTTTGAGGCGCGCGTTGCTGATTTTGGGTTGTCCCGGTTGATTCTTCCTTATCAGACCCATGTTAC AACTGAACTTGTAGGTACATTAGGTTACATTCCCCCAGAGTACGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTCT ACAGCTTCGGAGTTGTCTTGCTTGAGCTTCTCACCGGTAGGAGGCCGGTCGATGTAAGCAAGCCGAAAATGACAAGGGAA TTGGTTGGCTGGGTTCAACAGATGAGATGTGAAGGAAAACAAGATCAAGTCTTTGACTCTTTTATTAGAGGAAAAGGCTT TGAAGGAGAGATGCTTCAGGTGCTGGATGTGGCTTGCATGTGTGTTAACCAGAATCCTGTCAAGAGACCCAGCATCAGAG AAGTTGTTGAATGGCTCAAGAATGTAGGATCATCCAACCAACAAGGAAACAAAGATTAGCAAGAAATGCTTTGCCCTTCA ACATATCATGACAGTAGATATTGTTATACTTGTGCAAAAAAGTTTTGCTTTTCTATACACAGTTTAATTATCATTTTTAC CACTGTAAATGTTGACCCGCCCTGTCAGAATAAGATTTTGTGAATTATATTGTGATCATCCATTTTCAATTGCAAAATTT TCTTTACTTCACATTTCAATAGCTTCTGATTACTCCATCGGATGAGGAGTGCAGAATCCAAACCAATAAAGCCCACAGAA GTGCTACAAGTTACTGGTTTTAATTGGAACTGGACATCTCAAATTAAAGCCCACAGAACTTGTCATGTTTTTTACTCTAT AAATCAATGGCATGCCTGCTGTGTTAAAGCAAGCACAGTAGTGATCTTTGTTTTGTGCATACATCTGCATATAATCAGGT GAAACTAGGACAGAAAACTATTCTTCAACCAGTTATCTAAAGGAGAAGGTGCTTAAGCAACCAAACTATATTGGAGAGGG GAAATGCACATTGCTTAATTCTTCAGATACAATCATGCACTTCATGATAAGATCTGTGATTCAATAATGTCATTTTAGAA TCTGAATAGGGAGCATGACATGCCTT 

CDS sequence (LotjaGi3g1v0406300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGGTCATGCCTACCCATATACCCTTGTGTCCTCCTTCTTCTTCTGCTCTCATGTCACTGTGATCAACACCACCAA AGACTCAATCTTGCCCTTCTGGGTATCTCTAGTTCTCATGAGATCAGCCTCAACCCTATTACCCTCTTTTTCTTGTAAAT ACAATTACATGGTTTCCAATTTGATTATTCTGCCTTTACTTTTCTCCTTGTTGGTTGTTCAAGCCTCATTAATTTGTAAC CAGATTGATAGAGACTCACTCTTGGAATTTTCTGGGAATATATCTATCTCTTCCCCTTACCCTCCTCTCAGTTGGTCTTC TTCTTCTTCTTCCCTTGATTGCTGTGATTGGGAAGGTGTTACTTGTGATGGGGATCAACGTGTTACTCATCTTTTGCTAC CATCTAGAGGTCTCTTTGGAGTTATCTCCCCATCTCTCACCAACCTAGCTGCTCTCTCTCACCTTAATCTTTCTCATAAT AGATTATCTGGGAATCTTCAGAGCCAGTTTTTCTCACTGCTGAATCACCTTCTGGTTCTTGATTTGAGCTACAATCGCCT CTCTGGTGAGTTGCCACCCTTTGTTGCTGATAACAGTACTAGTGTTGTTATCCAGGAGGTGGACTTGTCTAGTAATTTGT TCAATGGAACGCTTCCATCTTCATTGCTTCAGCACCTGGCAGGAGGGAGTTTGATATCTTTCAATGTCAGCAACAACAGT TTCACAGGCCAAATCCCCACTTCAATCTTTTGCACCAATGACCGCAACTCGTCGTCTTCTATCAGATTCTTGGATTATTC TTTCAATGATTTTGATGGTGTCGTTCAGCCTGGACTAGGAGCATGTTCCAATCTGGAGAGGTTTCGAGCAGGTTTCAATT TTCTATCCGGGCCTATTCCTGTTGATATTTTTGATGCTGTCTCTCTTAAAGAAATATCACTGCCCCTCAATAAGCTCACT GGAAGAATTGGTGATGGCATTGTTAGCCTCACCAATCTCACAGTTTTGGAGCTTTACTCCAATCATTTCACTGGCCCCAT TCCGCAGGATATCGGTAATCTTTCCAAATTGGAACGGTTGCTTCTTCATGTCAACAATCTCACAGGTACTATGCCCCCAT CTCTGATGAAGTGTGCCAATCTTGTGGTGTTGAATTTAAGGGTCAACAAGTTGGAGGGGAATCTCTCAGATTTCAATTTC TCAGGATTCCTCAGACTTGCTACACTTGACCTTGGCAACAATATTTTCACTGGTGTTTTACCACCAACACTTTATGCATG CAAGTCACTTGCAGCATTAAGGCTAGCATCTAATCAACTTGAGGGGCAGGTTTCCCCCGCGATACTTGGACTTGAGTCTC TTTCTTTCCTATCAATATCCACTAACAAGCTGAGGAATATAACTGGTGCTCTGAGAATTCTGACAGGGCTCAAGAAGCTT AGTACCCTTATGCTGTCCAAGAATTTTTTGAATGAAATGATGCCACAGGATGTAAACTTAACAGGACAAGATGGATTCCA AAAGCTGCAGGTTCTCGGCTTGGGTGGTTGTCAATTTACTGGTCAAATACCAGGCTGGCTAGCAAACCTGACGAAGATTG AGGCCATGGACCTGTCCTTTAATAAGTTTAGTGGTCCAATTCCTCCTTGGTTGGGTGCACTTCCTCAGCTTTTTTACATA GACTTGTCTTTTAACCTCCTTACCGGAACATTTCCGACGGAGCTGACAAGACTCCCAGCACTAACATCACAACAGGCAAA TGATAAAGTAGAAAGGACTTACTTGGAGTTACCTGTGTTTGCTAATGCCAACAATGTTTCCCTATTGCAATACAATCAGC TTTCTAGCCTTCCACCAGCATTGTATCTCAAAAACAATCGCCTTAGCGGCAGTATCCCGATTGAGATTGGCCAACTGAGT GTCCTTCATCAGCTGGACCTGAAGAACAACAACTTCTCCGGCAATATACCGGTTCAAATTTCAAACTTGACCAATTTAGA GACACTAGACCTCTCAGGAAACCACCTATCTGGTGAAATTCCTGATTCACTCAAAAGATTGCATTTCTTGTCCTTTTTCA GTGTAGCATTCAATGATCTTCAAGGACAGATACCAACCGGTGGTCAATTTGATACTTTCTCCTTTTCCAGCTTTGACGGA AACACACAATTGTGTGGTTCAGTTATTCAGCGCTCTTGTCCTTCTCAACAAAATACTAACAGTGCTGCAGCTAGTGGCAG TTCAAACAAAAAGGTATTGATTGGAATTATTAGTGCAGCTTGCTTTGGCTTTTCTTCCTTGGTGACCTTGTTGACACTGT GGATACTCTCCAAGAGGAGGGTCAATCCAGGAGCAGCTTCTGACAAGATTGAACTGGAATCAATTGCTACCTACTCCAAC AATGGGGTTTATCCTGAGATTGACAACGAGGCTAGCCTAGTGGTCTTGTTCCCCAACAAAACTAATGAAACCAAGGATCT TACAATATTTGAGATCATAAAGGCCACTGAGAATTTCAGTCAATCAAACATCATAGGATGTGGGGGTTTCGGTTTGGTTT ATAAAGCAACATTACCGAATGGGACTAATCTAGCCATCAAGAAACTTTCAGGAGATTTGGGCCTTATGGAAAGGGAATTT AAAGCAGAAGTTGAGGCTTTGTCAACAGCACAACATGAGAATCTAGTGTCATTGCAAGGCTACTGCGTGCACGGTGGTTT CCGCCTTCTCATATACAACTACATGGAGAATGGAAGTCTGGATTACTGGTTGCATGAAAAGGCTGATGGTGCATCACCGC TTGATTGGCCAACTCGTTTGAAGATCGCACGAGGAGCAAGTTGTGGTTTGGCTTATCTGCATCAGATATGTGAACCGCAC ATCGTGCATCGCGATATAAAGTCAAGCAATATACTCCTTAATGAAAAGTTTGAGGCGCGCGTTGCTGATTTTGGGTTGTC CCGGTTGATTCTTCCTTATCAGACCCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCAGAGTACGGAC AAGCATGGGTGGCTACTCTGAGAGGAGATGTCTACAGCTTCGGAGTTGTCTTGCTTGAGCTTCTCACCGGTAGGAGGCCG GTCGATGTAAGCAAGCCGAAAATGACAAGGGAATTGGTTGGCTGGGTTCAACAGATGAGATGTGAAGGAAAACAAGATCA AGTCTTTGACTCTTTTATTAGAGGAAAAGGCTTTGAAGGAGAGATGCTTCAGGTGCTGGATGTGGCTTGCATGTGTGTTA ACCAGAATCCTGTCAAGAGACCCAGCATCAGAGAAGTTGTTGAATGGCTCAAGAATGTAGGATCATCCAACCAACAAGGA AACAAAGATTAG 

Protein sequence (LotjaGi3g1v0406300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDGHAYPYTLVSSFFFCSHVTVINTTKDSILPFWVSLVLMRSASTLLPSFSCKYNYMVSNLIILPLLFSLLVVQASLICN QIDRDSLLEFSGNISISSPYPPLSWSSSSSSLDCCDWEGVTCDGDQRVTHLLLPSRGLFGVISPSLTNLAALSHLNLSHN RLSGNLQSQFFSLLNHLLVLDLSYNRLSGELPPFVADNSTSVVIQEVDLSSNLFNGTLPSSLLQHLAGGSLISFNVSNNS FTGQIPTSIFCTNDRNSSSSIRFLDYSFNDFDGVVQPGLGACSNLERFRAGFNFLSGPIPVDIFDAVSLKEISLPLNKLT GRIGDGIVSLTNLTVLELYSNHFTGPIPQDIGNLSKLERLLLHVNNLTGTMPPSLMKCANLVVLNLRVNKLEGNLSDFNF SGFLRLATLDLGNNIFTGVLPPTLYACKSLAALRLASNQLEGQVSPAILGLESLSFLSISTNKLRNITGALRILTGLKKL STLMLSKNFLNEMMPQDVNLTGQDGFQKLQVLGLGGCQFTGQIPGWLANLTKIEAMDLSFNKFSGPIPPWLGALPQLFYI DLSFNLLTGTFPTELTRLPALTSQQANDKVERTYLELPVFANANNVSLLQYNQLSSLPPALYLKNNRLSGSIPIEIGQLS VLHQLDLKNNNFSGNIPVQISNLTNLETLDLSGNHLSGEIPDSLKRLHFLSFFSVAFNDLQGQIPTGGQFDTFSFSSFDG NTQLCGSVIQRSCPSQQNTNSAAASGSSNKKVLIGIISAACFGFSSLVTLLTLWILSKRRVNPGAASDKIELESIATYSN NGVYPEIDNEASLVVLFPNKTNETKDLTIFEIIKATENFSQSNIIGCGGFGLVYKATLPNGTNLAIKKLSGDLGLMEREF KAEVEALSTAQHENLVSLQGYCVHGGFRLLIYNYMENGSLDYWLHEKADGASPLDWPTRLKIARGASCGLAYLHQICEPH IVHRDIKSSNILLNEKFEARVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVLLELLTGRRP VDVSKPKMTRELVGWVQQMRCEGKQDQVFDSFIRGKGFEGEMLQVLDVACMCVNQNPVKRPSIREVVEWLKNVGSSNQQG NKD 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 5 5 -
Phobius 6 23 18 -
Phobius 24 29 6 -
Phobius 30 50 21 -
Phobius 51 55 5 -
Phobius 56 79 24 -
TMHMM 56 78 23 -
PANTHER 65 1117 1053 0.0
PANTHER 65 1117 1053 0.0
Phobius 80 751 672 -
Gene3D 82 204 123 4.4E-25
Pfam 83 123 41 1.3E-7
SUPERFAMILY 105 250 146 1.25E-14
SMART 149 173 25 56.0
ProSiteProfiles 151 173 23 6.064
SMART 174 198 25 42.0
ProSiteProfiles 176 198 23 6.164
PRINTS 177 190 14 1.1E-5
Gene3D 205 299 95 2.4E-15
SUPERFAMILY 206 577 372 1.49E-54
ProSiteProfiles 230 252 23 4.716
Gene3D 300 398 99 1.5E-25
SMART 330 354 25 43.0
ProSiteProfiles 332 355 24 4.724
ProSiteProfiles 356 377 22 4.909
ProSiteProfiles 380 402 23 5.818
Gene3D 399 742 344 3.3E-86
ProSiteProfiles 405 426 22 4.639
SMART 451 473 23 120.0
ProSiteProfiles 453 475 23 5.794
SMART 477 500 24 120.0
ProSiteProfiles 479 501 23 5.032
SUPERFAMILY 506 734 229 1.87E-29
SMART 554 585 32 260.0
ProSiteProfiles 556 579 24 4.632
ProSiteProfiles 604 624 21 5.017
ProSiteProfiles 641 664 24 5.163
SMART 663 687 25 9.1
PRINTS 663 676 14 1.1E-5
ProSiteProfiles 665 687 23 7.735
Pfam 665 687 23 0.012
Phobius 752 776 25 -
Phobius 777 1123 347 -
Gene3D 806 914 109 1.4E-31
SUPERFAMILY 824 1110 287 2.83E-79
ProSiteProfiles 839 1110 272 37.093
SMART 839 1110 272 8.1E-38
Pfam 840 1108 269 3.7E-40
ProSitePatterns 845 868 24 -
Gene3D 915 1123 209 1.7E-61
ProSitePatterns 961 973 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0406300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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