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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0412000 |
| Transcript ID | LotjaGi3g1v0412000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase, putative; TAIR: AT3G42880.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9M1L7|PRK3_ARATH Pollen receptor-like kinase 3; TrEMBL-Plants: tr|A0A1J7HL78|A0A1J7HL78_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0412000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81614640..81618436) extracted from Lotus japonicus Gifu genome v1.2.
GAAAACCAGTGGAAAACTGATAAAATTAGAAAAAAGAGAGGTAAAAAAAATTGCCCACACAGGCCATTTGTCCGTTAAGT TGTTAAAACTTGCACTAAAATTTAATTTTTCATTGCATGTTGTCTATATATGGGTTCAGATCATTTTATGAGAGTTTGGT ACTCTTACTGTTGAAAAGAACTGTTTTTTAAATATTTGATTTATACCCACAGAAACATTAGCACAATACTGGTTACTTAT AATTATCACCAAAGGATGATAACGGTTTTTAACTTTTCTTGACATGTTCAACCAAATTTCCAATTCTCTCTCTTCCCTAA AACCTCTCATTGTGAGGTTCTCTTAACAGAAACCCCACACCATGCATGCATGGAGGGGTTACAAAAAAACTAAGGAAAAA GAAAAACGAAAAAATAGCTGAAGGAATGACCAGAGGAAAAAAAAAATCACAATCACATTCCATAGTTGCCTGAAACGCCA AATTTTCAGCTAAGTTATGGCCGCGGCTCCGCCGTCTCTCTTCTTCATTATCATCACCGCCACCACCACTATCATCATCA CATTGCCACTGGTAGTACATTCCATATCAGAAGCTGAAGCGTTGCTGCGTCTCAAAAACTCGTTCTCTAATGCTCAATCT CTTGATACCTGGGTTGCTGGCTCCGTTCCTTGCACTGAAGATGATAATTGGGAAGGTGTTGTTTGCTACAATGGCCTTGT CACCGGGCTTCGCCTTGAACAAATGGGGCTGTTTGGGGAAATTGATGTTGATGCGTTGCTCGAACTCCAGGGTCTTCGAA CTTTAAGCTTTATGAGCAATTCATTCTCAGGTTCCATCCCGCAACTCAATCGAATTGGTTTCTTGAAAGCCATTTATTTG TCAGGGAATAAGTTTTCAGGGGAAATTCCTCAGGACTACTTCGCTGGAATGAGGTCTTTGAAGAAAGTATGGCTTTCTGA TAACCAATTCGCAGGGAAGATTCCAGTATCTTTGGTAGATATTCCTCAGCTTATGGAGTTGCATCTTGAAAACAACCAGT TTAGTGGAACAATTCCAGACCTGAAGAACCCTTCTCTGGTGAAACTCAATGTTTCCAACAATAAATTGGAGGGTGAAGTT CCAGCTAGTTTGTTGAGATTCGACGATACCTCGTTTCAAGGGAATTCTGGTATTTGTGGTGAGAAATTTGGCTCATGTGA GAAGCCAAAGGAGAACACAACTGCACCGAATAATGCTGAGCCGAACAACAATGGTGGTGGTGGTATTGTTGTGCCTGAGG AAAATAAGAGTTGGGGTGGCTCGATGGAGATTGCTGCGTTTGTGTTGGCGAGTGTAGTGGTTATCTCACTTGTTGTCATT TGCATTGTGAAATCAATGAAAAAGAAGGAGAAAGAGAAAGATTTTGATATAATTGGGCATCAAGTTAACGAAGGTGCAGT TGAAGTTCAAGTAACTGCTCCTGTGAAAAGAGAAGCGGAACCAGTGAGAAAACATTCATCAAGCAGAAGGGGATCTTCAT CTTTCCACGGTGTGAAGGGTGTTGGAGAAGTTGTGATGGTGAATGAGGAGAAGGGTGTTTTTGGGTTGCCGGATTTGATG AAGGCGGCCGCAGAGGTGCTGGGAAATGGAGGATTTGGATCGTCCTACAAAGCTGTGATGACGAATGGAGTAGCGGTGGT GGTGAAGAGGACAAGAGAGATGAATTCACTGGGAAAAGATGAATTTGATGCAGAGATTAGGAAGCTTGGAAATATGAAAC ACTGGAATATCTTGGCTCCTTTAGCTTATCATTACAGAAAGGATGAGAAACTAGTGATCTCTGAGTATGTTCCCAGAGGC AGTCTACTCTATTTGCTGCATGGTAAGACTTGTTCTTCTGATGTTCTCCCACTCAAAATTTTCATCAACTGCATAATCAG AAAAGAAAGGAGACATAAACATTCTTCAAACAACCAATAGCATGTTTGGAAATTCTTTTATTACTGATTCTAAACACAAC CAATTCTGGCGTTCTGCGTACTAGAATTGATTCCAAGGAAAGACAAGTTGATTCCGACATGCTACGTTTGGAAGAGCTCA TTTGAGCTTATCTTATAGCATAAGCGCTTAAACAAGTATTTGAGAGAACTTATGTACACAACTTATGGCATGCCTATAAG CCGTTTTGAGATTTTTTCATAAGCTGCTTAGATTAGCTTATGGATAAGCGCTTATACTTAGAACCTATTTTGAGCTTATT TCAATAAGCTTATCAAGTTAGCTTATGAATAAGTGCTTATACGATTAACGCTTATTGCTATAAGCGCTTAGTTAAGCCGT TTACCCAAACACACGTATAATAAGGATACTTGCAACCAGCAAATAACTACCATTATAATAGTCTTACATGTTTTCTTGTC AGTTGCTGATGGAACACAAGTTTTAACTACATTGATGTGAAAGAAGAAAGAACTACCATTGTTTAGTGACCTAGTGTCTT TTATTGTGCTACTTGCAGGTGATAGAGGACCATCACACGCTGAACTGGATTGGCCTGCTCGTTTAAAGATTGTAGGAGGA ATTGCTGATGGGATGCATTATCTTCACACAGAACTTGCTTACTCAGATCTACCTCATGGAAATCTCAAGTCCAGCAATAT TCTACTTGGACCAGATTATGAACCATTGCTTGTAGATTATGGGTTTGTCCATCTTGTTCACCCTTCAAATGCTCCACAAG CATTATTTGCTTATAAGGCTCCTGAAGCAGCACAACATGGCCAAGTTTCACCTAAGTGTGATGTTTATTGTTTTGGGGTT GTCATACTTGAGATACTCACTGGAAAGTTTCCTTCTCAATATCTTAGCAATGGCAAGGGCGGAACTGATGTAGTGCAATG GGTTGCCTCAGCAATTTCTGAGGGAAGGGAAGCAGAGTTACTTGATCCTGAAATTGCAAATTCTAGAAATTCAATGGGTG AAATGGAGAAGCTCCTTCATATTGGTGCAGCTTGCACTGAAAGTAACCCTCAGAAGCGATTAGACATGGCGGAAGCAGTT AGAAGGATAGAGGAGATAAAAGGCAAAGGTGGTCAAGAATCTAGAACAATAGAGGTGTTGCCATCTCCCACAGATGGCTA TGCAGAATCTCAAATGTTTGATAACCAAGGGCACGGTGTCCAATCACAGAGGAGACATGAATCAAACAGCTTTGGAAGCC AGGATAAATTGGAATTTGGCATCTCCTAATTAACAGATAGTTAACAATTTAGGTACAAAGTGTGTCTTTATTGGAAGAGG ATGTGTCATGATTGTCTCTTGGAATTCATAGAAAGAGAATAGCATATTTGGATGAGGGACATGAGAAATTTGGCACATAC CTTCTCTTTGAAGCTTGAACATATAGATCAGGGACATGGCAGGTAAGTTTACTGATATCTAGGACAAAGCTTTGTAGGAG TTTCAGAATTACTTTCTCTGTCCTGTTTTTTTTTATTATTGTAAATCTTTTAGTCACTGATATAAGACATTTCTATAATA CTCCCTCCCCTACTAATATCTTTGGTTGCATCGCCTTAAAAACCTATGAGAACTGGGATTAAGACTTCTTGCAATATTTG ATGAAAGATCACAATCCACTAACCAAATAAAAGGTGATGAGGAGGCAGCCTACATGTTGGTCAATGAAAGTCCAGAATTA GTTACTGATAAATTGGGTTTGTTCAATTGGTAAATGTAATTTTGTGATTGGTCAGAGATAATTGTTTTTACACATCACTG GTTATGTGTGATTTAACTAAATTAATTTGAATAAATT
CDS sequence (LotjaGi3g1v0412000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCGGCTCCGCCGTCTCTCTTCTTCATTATCATCACCGCCACCACCACTATCATCATCACATTGCCACTGGTAGT ACATTCCATATCAGAAGCTGAAGCGTTGCTGCGTCTCAAAAACTCGTTCTCTAATGCTCAATCTCTTGATACCTGGGTTG CTGGCTCCGTTCCTTGCACTGAAGATGATAATTGGGAAGGTGTTGTTTGCTACAATGGCCTTGTCACCGGGCTTCGCCTT GAACAAATGGGGCTGTTTGGGGAAATTGATGTTGATGCGTTGCTCGAACTCCAGGGTCTTCGAACTTTAAGCTTTATGAG CAATTCATTCTCAGGTTCCATCCCGCAACTCAATCGAATTGGTTTCTTGAAAGCCATTTATTTGTCAGGGAATAAGTTTT CAGGGGAAATTCCTCAGGACTACTTCGCTGGAATGAGGTCTTTGAAGAAAGTATGGCTTTCTGATAACCAATTCGCAGGG AAGATTCCAGTATCTTTGGTAGATATTCCTCAGCTTATGGAGTTGCATCTTGAAAACAACCAGTTTAGTGGAACAATTCC AGACCTGAAGAACCCTTCTCTGGTGAAACTCAATGTTTCCAACAATAAATTGGAGGGTGAAGTTCCAGCTAGTTTGTTGA GATTCGACGATACCTCGTTTCAAGGGAATTCTGGTATTTGTGGTGAGAAATTTGGCTCATGTGAGAAGCCAAAGGAGAAC ACAACTGCACCGAATAATGCTGAGCCGAACAACAATGGTGGTGGTGGTATTGTTGTGCCTGAGGAAAATAAGAGTTGGGG TGGCTCGATGGAGATTGCTGCGTTTGTGTTGGCGAGTGTAGTGGTTATCTCACTTGTTGTCATTTGCATTGTGAAATCAA TGAAAAAGAAGGAGAAAGAGAAAGATTTTGATATAATTGGGCATCAAGTTAACGAAGGTGCAGTTGAAGTTCAAGTAACT GCTCCTGTGAAAAGAGAAGCGGAACCAGTGAGAAAACATTCATCAAGCAGAAGGGGATCTTCATCTTTCCACGGTGTGAA GGGTGTTGGAGAAGTTGTGATGGTGAATGAGGAGAAGGGTGTTTTTGGGTTGCCGGATTTGATGAAGGCGGCCGCAGAGG TGCTGGGAAATGGAGGATTTGGATCGTCCTACAAAGCTGTGATGACGAATGGAGTAGCGGTGGTGGTGAAGAGGACAAGA GAGATGAATTCACTGGGAAAAGATGAATTTGATGCAGAGATTAGGAAGCTTGGAAATATGAAACACTGGAATATCTTGGC TCCTTTAGCTTATCATTACAGAAAGGATGAGAAACTAGTGATCTCTGAGTATGTTCCCAGAGGCAGTCTACTCTATTTGC TGCATGGTGATAGAGGACCATCACACGCTGAACTGGATTGGCCTGCTCGTTTAAAGATTGTAGGAGGAATTGCTGATGGG ATGCATTATCTTCACACAGAACTTGCTTACTCAGATCTACCTCATGGAAATCTCAAGTCCAGCAATATTCTACTTGGACC AGATTATGAACCATTGCTTGTAGATTATGGGTTTGTCCATCTTGTTCACCCTTCAAATGCTCCACAAGCATTATTTGCTT ATAAGGCTCCTGAAGCAGCACAACATGGCCAAGTTTCACCTAAGTGTGATGTTTATTGTTTTGGGGTTGTCATACTTGAG ATACTCACTGGAAAGTTTCCTTCTCAATATCTTAGCAATGGCAAGGGCGGAACTGATGTAGTGCAATGGGTTGCCTCAGC AATTTCTGAGGGAAGGGAAGCAGAGTTACTTGATCCTGAAATTGCAAATTCTAGAAATTCAATGGGTGAAATGGAGAAGC TCCTTCATATTGGTGCAGCTTGCACTGAAAGTAACCCTCAGAAGCGATTAGACATGGCGGAAGCAGTTAGAAGGATAGAG GAGATAAAAGGCAAAGGTGGTCAAGAATCTAGAACAATAGAGGTGTTGCCATCTCCCACAGATGGCTATGCAGAATCTCA AATGTTTGATAACCAAGGGCACGGTGTCCAATCACAGAGGAGACATGAATCAAACAGCTTTGGAAGCCAGGATAAATTGG AATTTGGCATCTCCTAA
Protein sequence (LotjaGi3g1v0412000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAPPSLFFIIITATTTIIITLPLVVHSISEAEALLRLKNSFSNAQSLDTWVAGSVPCTEDDNWEGVVCYNGLVTGLRL EQMGLFGEIDVDALLELQGLRTLSFMSNSFSGSIPQLNRIGFLKAIYLSGNKFSGEIPQDYFAGMRSLKKVWLSDNQFAG KIPVSLVDIPQLMELHLENNQFSGTIPDLKNPSLVKLNVSNNKLEGEVPASLLRFDDTSFQGNSGICGEKFGSCEKPKEN TTAPNNAEPNNNGGGGIVVPEENKSWGGSMEIAAFVLASVVVISLVVICIVKSMKKKEKEKDFDIIGHQVNEGAVEVQVT APVKREAEPVRKHSSSRRGSSSFHGVKGVGEVVMVNEEKGVFGLPDLMKAAAEVLGNGGFGSSYKAVMTNGVAVVVKRTR EMNSLGKDEFDAEIRKLGNMKHWNILAPLAYHYRKDEKLVISEYVPRGSLLYLLHGDRGPSHAELDWPARLKIVGGIADG MHYLHTELAYSDLPHGNLKSSNILLGPDYEPLLVDYGFVHLVHPSNAPQALFAYKAPEAAQHGQVSPKCDVYCFGVVILE ILTGKFPSQYLSNGKGGTDVVQWVASAISEGREAELLDPEIANSRNSMGEMEKLLHIGAACTESNPQKRLDMAEAVRRIE EIKGKGGQESRTIEVLPSPTDGYAESQMFDNQGHGVQSQRRHESNSFGSQDKLEFGIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 7 | 27 | 21 | - | – | |
| PANTHER | 25 | 643 | 619 | 1.6E-223 | – | |
| PANTHER | 25 | 643 | 619 | 1.6E-223 | – | |
| Gene3D | 25 | 119 | 95 | 5.4E-13 | ||
| Phobius | 28 | 271 | 244 | - | – | |
| SUPERFAMILY | 30 | 214 | 185 | 2.15E-27 | – | |
| Pfam | 31 | 70 | 40 | 2.0E-7 | ||
| Gene3D | 120 | 242 | 123 | 1.9E-26 | ||
| Pfam | 123 | 182 | 60 | 5.0E-7 | ||
| MobiDBLite | 237 | 260 | 24 | - | – | |
| MobiDBLite | 238 | 252 | 15 | - | – | |
| TMHMM | 272 | 291 | 20 | - | – | |
| Phobius | 272 | 291 | 20 | - | – | |
| Phobius | 292 | 698 | 407 | - | – | |
| Gene3D | 348 | 444 | 97 | 1.8E-14 | – | |
| ProSiteProfiles | 369 | 642 | 274 | 27.679 | ||
| SUPERFAMILY | 373 | 639 | 267 | 6.83E-52 | ||
| Pfam | 373 | 637 | 265 | 1.3E-28 | ||
| CDD | 375 | 642 | 268 | 3.68165E-87 | – | |
| Gene3D | 445 | 655 | 211 | 9.4E-43 | – | |
| MobiDBLite | 643 | 698 | 56 | - | – | |
| MobiDBLite | 664 | 692 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0412000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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