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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466600 |
| Transcript ID | LotjaGi3g1v0466600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3'-5' exonuclease domain protein; TAIR: AT2G32415.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein; Swiss-Prot: sp|A9LLI8|RP6L3_ARATH Protein RRP6-like 3; TrEMBL-Plants: tr|A0A151S0B7|A0A151S0B7_CAJCA Exosome complex exonuclease RRP6; Found in the gene: LotjaGi3g1v0466600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88201773..88210310) extracted from Lotus japonicus Gifu genome v1.2.
GCCCATCAAAGCAGCGCAAGTTAAACTCCGCCGCCACAAGCCGCACCGGCCACCGCCTCCACCGTGCCTTCTGCACAAAA AAACCCAAACTCAACTCATCAGAGCAGCGAAGACCAAAAAACATGAACACCGGAAACAAAACGCGCGTGGCGGCGGCATT CACGATCGCTGCTTTAGCAGCTACCATCATCTCCATCTTCTTCACCGCACGACGACGCCGTAACCACCGGCACGAGTCCC CTCCGAGCTCGTGCTACTCACATTCCGAACGGAAGCCACAGTGCGCGTTCAAGCGTGTCTTGGCAGATAACTCCTACGCT CCATTCAAACACTTGAGCCTCAACGATGGTACGTTTGCTTGCCTATGATTCTGTGAACACTTTGTTTCTTCATTTGCTGC GAATTTTGCATCAGGTTAGACAAGTGAAGTAGCGTAGTCTAGTTCGGTGTAGCTATATGAGTGTTGTCAAATCGCGATCG CGGACCATCGCGGTGAGTAAAAAATCCGCTATCTCGGCCGCTATTTATCGGCAAATAGCTGGAATAGCGCGCTATAGTTG CGCTATAGTTGGCAATAGCGGCATTGCGATGAGCCAAAAATCCACTACGCCGCTGTAGCAGTTAGGCGCAGCGCCACTAT AGCCGCTATTTGATAACACTGAGCTATATCAGTGCAAAAATGGTGGAAATTTTCGGAAATTTTGATATGGCAAAGTCTTA GATTTCAATTTTCAAGTGATAAGGTTCCATTTTATAGATTTGTTTGAAAAATTGGTACAAAATAAGAACTAGGAAGTTCA TCATTGTTGAGTTCTCTGTGCGAGATTATAAAGATTTAGCTGAGTTTATTGGTTTTGTTACAGAGAATGGTTCGGATTTG CATCCGTTTGAGGCAGAGATTACGGCATTGGTAAGAAGTCCTCAGCCGGAAATTGAACTTAGTGATGATTTTGAGGTTGT GGACTTGGAGACGAATGATTCGTATGTTTGGGTCGATACAGAGGTACTGTTAAAGGAACTGGTCAATGAATTGAGCAAGG AGAAGTTCTTTGCCGTGGACACAGAACAACATAGCTTACACTCTTTTTTAGGCTTTACAGCATTAGTTCAGGTAATTCTG TGCTGCTTTGAAGTTTTAAGTACTTATCTCTGATTGCATTGTGCCATTATTATTTTTTTCCGGATGAATTTGGTGATGAT TAGTGTGTCTTTTGATGTAATCAAGCAGATTTCTACACAGAAGAAAGATTATTTGGTTGACACAATTGCTCTGCATGATT CTATGGGAATCCTTCGCCCAGTTTTTGCTAATCCTTCCATTTGTAAAGTATGTAAGTTATTGGAATCATGCTTCTTAGCG GTTTCATATGATTTGGAAACTTATTGGGGCAGGGGGGATGATGTTTATATTTCAATTAGTTTCTCTTTTTAAGCCTAAAT TTATAATTTTTTAGTAAGATTTTCATCATAAATTCTTTGAATGATTCTGATTCTTTCTCTTTTATATATATATATACTGC ACCTTATATTTTGGAATTGGGGCTAAAGCATATCATTTATGAAAATATTTTAGTTGATTTATTTGTTTGTTTTTGTTGTC CTAGCAATTTATTTCAGTCTCTTTTCTCATTGAAATATTTGTGGATAGGTGTTCCATGGAGCTGACAATGATATTCTCTG GCTACAGAGGGACTTCCATATTTATGTTGTTAATCTTTTTGATACTTCTAAGGTGAGCTACTCCTAGTCCTGTCTTGTTA TCTGACTATCTATTGGGTGTCATGTACCCTACAGAAATTTCTCCTCATGCATGATGGTGACCGGAGAAGTTTCCCTTCTA CAATTGATTGATAGCCTTTTTTAATCCATGTCTTCATGTACTGCAGGCATGTGAAGTGCTTTCAAAACCACAGAAATCAC TTGCTTATTTGCTAGAAACTTACTGTGGCGTGGTGACAAATAAATTATTACAGGTTTGACCTGATCTTATGCTTGATCCA CAAACAAATTATTACATTGGATAAGTTCATTGATTGTCATCAACAATGTTGGAGACTATTTAGCATGGATATATTTAAGT AAAATGCAATGCCTAAATTTTTCATTTATTTCAATAAATAGCAGAGTTCAACTGAGAATGAATGAGCTTTAAAAACACAT TATAAAGTTCTGGCATCCTATGTGTTTTTCCCTAAGAATGATAGGCTTCTTAAATGAGCTTTAAAAACACATTATTACGG TTTCAATTGTTTAGTAATATAAATCATAATCATAATTTTCTTATGTACACGGGATTAAAATTCTAACTTGTAAAGAAATT TGATCTCAAGCAGTTGAGATTAAGGGCAGTCATCATTTAAATTGACATTGAGGTTGCTCCTACATGGAAGAAGAGATTTC TAAATGATGTATGAGAAAATCTCCCTTTTCTACTGCTTCAGAAGTAGCCTTCTGAAGAATTTGAACAATGAATATAGTGT GCCAATAATTACATTTTTAAGACATCTTTTAAAATTGTGTTGCATTTGTTGTTAATGGTGTAGGCGACTAAGCATTTAGT ATGAGGTACATCAATGAATTATTATAGAGTTTAGTCTTTAGCAGGGCCGTGTACAGCGATTTTAGGGCCTAAGGTGAAAA TGTTAAAGTCATTTTATTTTGACAAGAATCTAAAAGAGACCTAACATATTATATAAATTATCAATTTTTTTATATTAATC TTCCCGTTTTTTAAGGTGCGAAATCATTTATCAAGACTTTTATACTGTAAAATAAAAAAAATTATGAACAATAGAACATA AAACACAATGAATAAATTAATGAGAGATTTTGCAACACTTTAATGTCAAATATCTTCTTTGATAATTTACTTCAACGTAC ATAGAAAATGAAAAAAATTCTTTTTTTTCTAGAGAAGAAACAGAAAGTGAAGAGCAAACATATACAATACTATATATATA AGTTATTAAAAACTATTATGAGTAACACAATTTAATTTTTTGAGTTTAGCACTTCTAAGTTTTTACATTGCATTGCTCAT GTTGCAATTCATGTTATCTAATTTTTCATTATTTCATTACCATCTCAAGTCTCAGTAATATATCATGTCTACATACTAAA TATATTTGGAGGCCTATATATTCTTGGGGACCTTAGGCAATTGCCTATTTTAACTAAGGCCTTACACGGCCCTGGTCTTT AGGATATAGAAAGAGAAAAAAGGAATAGTGAGAATAAAATTGTATTGATATAATATATTGGATGTGATGTTATAAAAGAC AGAGTACTTACCTTAATTTATAGTAATGGTAGACTCCTTATTATAATTGAATGGAGAAACTAATTAAGACCCCTAATCCT AATAAAATAAGAAAACAAATCAATATTAGTTAGAAGAAAAAAAACTAATCCCAAAGAATCATCTAAATTACCTTAAATTA ATCAAAGATATTGCAAAATATTTTTTTATTCTAACAAATATTTTTTCATTGTAAAATACTAAAATGTCGTAAATAAGATG GAAGGCTATTACTCTGGATTTGGGATGTTATTTTTAATTACTGACTAGAATTGCAATTTTCTTTTGTGCTTAATGTAGCG TGAAGACTGGAGACAGCGCCCTCTCTCAGCAGAAATGTTACATTATGCACTAACAGATGCACACTATCTGTTGTATATTG CAAACTGTATGATCAATGAACTCAGACAACTTGACAACGGTATTCCTTCTTGCCAAGCTCTTTTTCCTCCTTTATTTCCT TCCCATGCCCCAAAGAAATGTGGTAAAGAAATAAGCAGATTCATGATCGTAAGCATTTGGTTATTTTAACAGGATAATTT TGATAAACTAAATGAAGAAATGGATCTTTTTTCTTAGCCACTTCTCAACTTAGCAACTGATTAGGACCTTTCTTTGTTAA TGTTGAGTTAAAGTTTTAAATTTGTTGTTGGGTCAGAAAACTCTGGTTCTGATGATAAAATCCAGTTTGTCCTCGAGGCT TGTCGGCGTTCAAACATGATCTGTTTACAACTTTTCACAAAGGATATTGAAGCTTCACCTGGAGAATCTTCTGTATTATC ATTATTTTCTCGTCATGTGAGCAGCCAAGATGTGCCTTCAATTTCCAATGAAACCCAGGTTTGCCGCATAACATGAGTGG TCAGGTTCAGCATTTGAAGTAGTGTAATGTGAGTGGTCTGTTGAATATGATATTCTAACATAATTCTCTGATTACAGTTT CAGCATACTGTGAGGCAGCTATGCACATGGAGAGATTTGATGGTCAGTTATGAATATTAAGGGTGCTTAAATTTAGATAA GAAGAGTTGTTTTACTGTAGCTATGTCTTACTGCTTAACTTGAATTTTGTGCTTATCAAGAAAAATAGAAAAAACTAAGT TTGAAAATTACAAGATGGATTGGATTTGGATCAGAAATTAATGTACCTTGTTCATAGTCATTAGAGATCGAAACATGGTT ATTGAGATTATAAGTTCTACTTTTCATGCCATTACATAAAATAAAACTTGGAGTAATACTGGAATGAAAAAAAAATAGCA GTTTAACTAAGTATTTCTAAGATTGCTTTGATGTATCGAGATTTATTATGATTGAATATACATGACTTTTGTTTAGTTAT TAACTGCTGACAATGCATCAACTTTATTTTTTATAGTAATAATATATGTAGGCTTATATTTGATTCTGCCATGATTTGTC ACCAAAAGAATTTATAAAATTAAGTTAAACTAATTCTACTTTCTATTATAGTGATGAAACTAAATTTATAAATGAAAGAT TTCATTGCTTGCTGTGCAAATTTTGATGTAATGCTGGATGCATTATATTTGATGTCAGAAAATTATATTTTAGCACCTTG AGTTGATTATTCTGTGCCATGTTCATCCTTTCAGGCTCGTATTCATGATGAGAGCTTAAAATATGTACTGTCAGATCAGG CAATTGGTGCTTTGGCAAGTCAGCCACCAGCAACTCACACTGAAATATACAAAACTATAGCTCGTACTGATATCAATTTT GAAATGGGTCTCAACTCTATCATCCCTTCCCCATCTCCTGTTGTTTGTAGCCACCTGAATGATATCTATGATCTGCTTGC GAACAAGCTGGTTAACCGTGGTGATATTTATTCAGTGATTATTCAGAAGTGTCTTGGTCAAAATGGGATTTGTCAACTTT CTATATTTAATTATGCTTTGCTGGTTAACGGTAGCCCGAGACCTACTTCAGTCCATAAGCATTCAAGACTAAAAAATCTT AAACAATTCTCCCGGAAGGCTTCTAGAGATTTGTTCGTTCAAAAGTTTTCTTGCAAAGCTCCTGTTTATCACAATTGTCG GATATATGCTAATGATGGAAGGCTACTTTGTTATTGTGATCGGAAGAAGCTTGAATGGTTTGTGCACTTTCACTTTTATT CCATTTGTAAAAGACTAAAATGTACTCTTTCTTCATGATTAATGTTCAAACCTCCAGGTACCTCAGCCGGGATCTTGCTA AACTTGTTGATGACGATCCCCCAGGTATAATGCTTCTTTTTGAACCCAAAGGCCGCCCGGAGGATGAAGACAATGACTTT TATATCCAGAGTAAGAAAAATATATGTGTTGGGTGTGGTGAAGGAAACCACTACTTGCGGTATCGAATAATCCCATCATG TTACAGAATACATTTCCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCCTACTTTGTGTGGATTGCCATGAAA TTGCCCATGCTGCTGCAGAGAAGTATAAGAGAAAGATAGCTGCTGAATATGGGATTCCTCTCTATGTTCGTAGTGTAATT CATCCAAGGGAAAAGAATGAAGAACAAACTGAGGAGGGAGGTGTATCTCCATTACAATTACGAACAGCTGCAATGGCTCT TCTACGCCATGGACCAAGAATGCCTCTCGATCGCCGTGAAGAACTAACTGAGGTTTGATCATATTTCTGTCTGCTATTGG TTATTTTGACACAGCTGTTGTAGAGCCCCACTTGATGAGTAATTTATAGTTTGGGTATAGCCAAGTGGGAATGGATTTGT TTAAGCTATTTTGGATGCATTTTAAATACAAAATATGGGTTCTAAATTGCACTTCTGTAGTGATATATTGGTTTGTTATT GCTACTGAAGAACATCAACTATAGGAGCTTCTGTTTATAAGGTTATATGTTATATTTTTGCAGATTGTAAAAAGATATTA TGGAGGGAGAGAAATAACTGAGGAAGATCTAGAAGGAGCTTTGCAAGTTGGCATGACTCCTCAAGAGAGAAGACGGTTCG AGAAGAAGAGGGGGTTTTCTTTTAAACATTCTACGGAGAGTACTGCTGCAGTGCCACAACTGGAGAATCATGTTGGTTGC GCTCCGGGTGATGAGGACGCATTGAATGATGATGCTCATGATGGAGAACTTTTGATGGAAAAAGATGATCTAGGGAACCC CTTATTAGCTTCTGACCTTGCAGTTGATGCAGCTATTTCAAATGGAGATTATAATGAAGGTGGGAACTCTTTAAATGTTG ATAACAGTCTGAGCAGAACGCTACCAAATGGAGTTAGCGACTTGTTTGATCCCTCCAAATATGAAGAATCAACACTAGCG AAGCATAATTCGAAACTATCACTCTTGGGACATGGACCACACGGGAATTTAGTTGTAGAACATTTACTGAAGGAGTTTGG TGAAGAGGGTATTGGAGAGTTTTGTCAAAGATGGAGACAAGTATTTGTGGATGCTGTAAATCCACGATTTCTTCCTGGTG GTTGGGATGTGAAACACAGGTATGCTGTAATTATTTATTTTTCTTCTTGCTTACTTTTTGATGGTCATCCCAAATGGTTG TTAGTAGTGCACTTATGATACTGATATTTATTTTAACAACTGAATTATTATTCCTTTCACCAAGGCTTTGACATTGGACA CTTTTTGCCAGTGGACGAAGGGAGTTCGGCAAGTTCAGTGTATACAATACTGACAAAAGAGTGGATGCTGTTAGTATGTA GCGACTCTGCAGGATCCTACTAGTTGCTAGTTGCTAGTTGCCACACTTCCTCTCATTTTGTTGCTTGTACTTTAGTCTGA TTTTGTTAATTTGATTATTTATGAGAATTTTCATGTAATTTTTTTGTAGTTAGAAAGAGGGACAAGTAGCTTTGAAGGAC TTTGCCCATGCTTTAATCATTCTCATCAAATTATAACATCACAAGGAGCAATCTGTTTTTCAAACATGACATCTATGCTT TGGATCATCCCTGAGGCAAATTCTTCACATGATATCTTTTCGAACATTAATAAAGAATTTTTTTCTTAGGGATAAAATTT AAGTAATGTGTTTACTATTCAATGGATCATTACTAAATTATAGTGCTATATGATAATATGATTTCCCTGAGATTACATTG ATCGCTGCAGCTAAGAGATCTTAATGTACAACATAGGTAAAAAAGTATTCATAAAACAAAGTAGTCTCTTCAGTTTTGTA ATATCTATTCTAATCCTCAATCCGCTGTCTGACATGACATCCGTAGTTACAAAACTTCCATACAAGGAAGAATGTACTAG TACTGCTTAACGATCAGAAATGCTTCAAAAATGCGCACTACAAGATACAAGGAAGCCATAGTTAATGATAGCTCACTCCA GCAAATCGACGATCTTCCAATAGAACCCTGCTGCATCAGCACCATTATAAATTACAATGTAAGGATAAAAACTGTAGCGA CAAGGTTATGGAGCCAAACTAGAAAGTTAAAGTATTACCACAGTGAAAACAATTACAGTGACAATATCTGTGATTTGTGG TCAATGCCGTTGAATATGAAGGTTCCGGACATTGGTACAAATTGCCTTGTTATGAGCTGCAAGGAACATAAGTAATGTCA GGTATAGGACAGAAGCAAAATGAATTTCCTTTCTTTGCACATAGCACATTCATTTGAAAGAATTTTACCGAATACTGCTA ATTGTTGTAACTACACAATTCCATTAACATGAGCCTCAATTCAAATGCATAGGCCAACGCTTAAATTTTAAGTAAAAAAA ATAGCAGAGCTCCTCAATTTAGATTACACTCAATTCTTTCGTGCCAATGTCCTTCTATGATAAACCTGATTCCTCTCCCT CATCTATTGTTCAATGCAGATGTTAAAAGAGTGTGTGGATAACTATTAAGGAAAACTAGAGGTGTGGGATAAAGGTAATT TATACTTCATCTTAAAGCCTAGCAATGGCTCCCTTCCCCCCACGCTCCATTTTCTCTTCAATATTTTTCAATACAACATT CCCCTTCACATACATGATACAATTCCAAGCCAAGCTTCATCTGCTATGAACTTTGGGCACATGCGGCGCAGAACTTCTAA AAGGCAACCTGGTGCTTTTTTGAAGCTTCCACCAGAAGATATTGATACTACACGCTCTATCAGAAGGGTCTAGCCCATTG AGTCCTATTGTGAGCTATTGTAGGAAAATGCAACTTTATGCACTTGCAAAGAAGATCC
CDS sequence (LotjaGi3g1v0466600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACACCGGAAACAAAACGCGCGTGGCGGCGGCATTCACGATCGCTGCTTTAGCAGCTACCATCATCTCCATCTTCTT CACCGCACGACGACGCCGTAACCACCGGCACGAGTCCCCTCCGAGCTCGTGCTACTCACATTCCGAACGGAAGCCACAGT GCGCGTTCAAGCGTGTCTTGGCAGATAACTCCTACGCTCCATTCAAACACTTGAGCCTCAACGATGAGAATGGTTCGGAT TTGCATCCGTTTGAGGCAGAGATTACGGCATTGGTAAGAAGTCCTCAGCCGGAAATTGAACTTAGTGATGATTTTGAGGT TGTGGACTTGGAGACGAATGATTCGTATGTTTGGGTCGATACAGAGGTACTGTTAAAGGAACTGGTCAATGAATTGAGCA AGGAGAAGTTCTTTGCCGTGGACACAGAACAACATAGCTTACACTCTTTTTTAGGCTTTACAGCATTAGTTCAGATTTCT ACACAGAAGAAAGATTATTTGGTTGACACAATTGCTCTGCATGATTCTATGGGAATCCTTCGCCCAGTTTTTGCTAATCC TTCCATTTGTAAAGTGTTCCATGGAGCTGACAATGATATTCTCTGGCTACAGAGGGACTTCCATATTTATGTTGTTAATC TTTTTGATACTTCTAAGGCATGTGAAGTGCTTTCAAAACCACAGAAATCACTTGCTTATTTGCTAGAAACTTACTGTGGC GTGGTGACAAATAAATTATTACAGCGTGAAGACTGGAGACAGCGCCCTCTCTCAGCAGAAATGTTACATTATGCACTAAC AGATGCACACTATCTGTTGTATATTGCAAACTGTATGATCAATGAACTCAGACAACTTGACAACGAAAACTCTGGTTCTG ATGATAAAATCCAGTTTGTCCTCGAGGCTTGTCGGCGTTCAAACATGATCTGTTTACAACTTTTCACAAAGGATATTGAA GCTTCACCTGGAGAATCTTCTGTATTATCATTATTTTCTCGTCATGTGAGCAGCCAAGATGTGCCTTCAATTTCCAATGA AACCCAGTTTCAGCATACTGTGAGGCAGCTATGCACATGGAGAGATTTGATGGCTCGTATTCATGATGAGAGCTTAAAAT ATGTACTGTCAGATCAGGCAATTGGTGCTTTGGCAAGTCAGCCACCAGCAACTCACACTGAAATATACAAAACTATAGCT CGTACTGATATCAATTTTGAAATGGGTCTCAACTCTATCATCCCTTCCCCATCTCCTGTTGTTTGTAGCCACCTGAATGA TATCTATGATCTGCTTGCGAACAAGCTGGTTAACCGTGGTGATATTTATTCAGTGATTATTCAGAAGTGTCTTGGTCAAA ATGGGATTTGTCAACTTTCTATATTTAATTATGCTTTGCTGGTTAACGGTAGCCCGAGACCTACTTCAGTCCATAAGCAT TCAAGACTAAAAAATCTTAAACAATTCTCCCGGAAGGCTTCTAGAGATTTGTTCGTTCAAAAGTTTTCTTGCAAAGCTCC TGTTTATCACAATTGTCGGATATATGCTAATGATGGAAGGCTACTTTGTTATTGTGATCGGAAGAAGCTTGAATGGTACC TCAGCCGGGATCTTGCTAAACTTGTTGATGACGATCCCCCAGGTATAATGCTTCTTTTTGAACCCAAAGGCCGCCCGGAG GATGAAGACAATGACTTTTATATCCAGAGTAAGAAAAATATATGTGTTGGGTGTGGTGAAGGAAACCACTACTTGCGGTA TCGAATAATCCCATCATGTTACAGAATACATTTCCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCCTACTTT GTGTGGATTGCCATGAAATTGCCCATGCTGCTGCAGAGAAGTATAAGAGAAAGATAGCTGCTGAATATGGGATTCCTCTC TATGTTCGTAGTGTAATTCATCCAAGGGAAAAGAATGAAGAACAAACTGAGGAGGGAGGTGTATCTCCATTACAATTACG AACAGCTGCAATGGCTCTTCTACGCCATGGACCAAGAATGCCTCTCGATCGCCGTGAAGAACTAACTGAGATTGTAAAAA GATATTATGGAGGGAGAGAAATAACTGAGGAAGATCTAGAAGGAGCTTTGCAAGTTGGCATGACTCCTCAAGAGAGAAGA CGGTTCGAGAAGAAGAGGGGGTTTTCTTTTAAACATTCTACGGAGAGTACTGCTGCAGTGCCACAACTGGAGAATCATGT TGGTTGCGCTCCGGGTGATGAGGACGCATTGAATGATGATGCTCATGATGGAGAACTTTTGATGGAAAAAGATGATCTAG GGAACCCCTTATTAGCTTCTGACCTTGCAGTTGATGCAGCTATTTCAAATGGAGATTATAATGAAGGTGGGAACTCTTTA AATGTTGATAACAGTCTGAGCAGAACGCTACCAAATGGAGTTAGCGACTTGTTTGATCCCTCCAAATATGAAGAATCAAC ACTAGCGAAGCATAATTCGAAACTATCACTCTTGGGACATGGACCACACGGGAATTTAGTTGTAGAACATTTACTGAAGG AGTTTGGTGAAGAGGGTATTGGAGAGTTTTGTCAAAGATGGAGACAAGTATTTGTGGATGCTGTAAATCCACGATTTCTT CCTGGTGGTTGGGATGTGAAACACAGTGGACGAAGGGAGTTCGGCAAGTTCAGTGTATACAATACTGACAAAAGAGTGGA TGCTGTTAGTATGTAG
Protein sequence (LotjaGi3g1v0466600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNTGNKTRVAAAFTIAALAATIISIFFTARRRRNHRHESPPSSCYSHSERKPQCAFKRVLADNSYAPFKHLSLNDENGSD LHPFEAEITALVRSPQPEIELSDDFEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLHSFLGFTALVQIS TQKKDYLVDTIALHDSMGILRPVFANPSICKVFHGADNDILWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCG VVTNKLLQREDWRQRPLSAEMLHYALTDAHYLLYIANCMINELRQLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIE ASPGESSVLSLFSRHVSSQDVPSISNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQPPATHTEIYKTIA RTDINFEMGLNSIIPSPSPVVCSHLNDIYDLLANKLVNRGDIYSVIIQKCLGQNGICQLSIFNYALLVNGSPRPTSVHKH SRLKNLKQFSRKASRDLFVQKFSCKAPVYHNCRIYANDGRLLCYCDRKKLEWYLSRDLAKLVDDDPPGIMLLFEPKGRPE DEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKYKRKIAAEYGIPL YVRSVIHPREKNEEQTEEGGVSPLQLRTAAMALLRHGPRMPLDRREELTEIVKRYYGGREITEEDLEGALQVGMTPQERR RFEKKRGFSFKHSTESTAAVPQLENHVGCAPGDEDALNDDAHDGELLMEKDDLGNPLLASDLAVDAAISNGDYNEGGNSL NVDNSLSRTLPNGVSDLFDPSKYEESTLAKHNSKLSLLGHGPHGNLVVEHLLKEFGEEGIGEFCQRWRQVFVDAVNPRFL PGGWDVKHSGRREFGKFSVYNTDKRVDAVSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 9 | 29 | 21 | - | – | |
| Gene3D | 22 | 321 | 300 | 3.5E-91 | – | |
| Phobius | 30 | 911 | 882 | - | – | |
| PANTHER | 34 | 905 | 872 | 2.2E-251 | – | |
| PANTHER | 34 | 905 | 872 | 2.2E-251 | – | |
| SUPERFAMILY | 51 | 307 | 257 | 2.53E-67 | ||
| Pfam | 116 | 283 | 168 | 1.8E-45 | ||
| SMART | 116 | 284 | 169 | 7.3E-42 | ||
| Gene3D | 340 | 441 | 102 | 5.5E-18 | – | |
| ProSiteProfiles | 347 | 427 | 81 | 9.102 | ||
| SUPERFAMILY | 349 | 432 | 84 | 1.2E-11 | ||
| Pfam | 354 | 394 | 41 | 1.8E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
| Molecular function | 3'-5' exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end. | ||
| Biological process | Cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. |
Expression pattern of LotjaGi3g1v0466600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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