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GO:0008408

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description 3'-5' exonuclease activity
Full defintion Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
Subterm of

Relationships

The relationship of GO:0008408 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCai

Associated Lotus transcripts 43

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0099649.1
– PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] gi|225450557|ref|XP_002277523.1|
GO terms
3
Lj0g3v0101539.1
– PREDICTED: exosome component 10-like [Cicer arietinum] gi|502091938|ref|XP_004489673.1|
GO terms
3
Lj0g3v0129439.1
– Polynucleotidyl transferase isoform 1 [Theobroma cacao] gi|508719716|gb|EOY11613.1|
GO terms
3
Lj0g3v0182059.1
–
GO terms
3
Lj0g3v0272529.1
– PREDICTED: probable exonuclease mut-7 homolog isoform X2 [Cicer arietinum] gi|502124374|ref|XP_004498500.1|
GO terms
3
Lj0g3v0307559.1
– PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] gi|225450557|ref|XP_002277523.1|
GO terms
3
Lj0g3v0315599.1
– PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cicer arietinum] gi|502168872|ref|XP_004514484.1|
GO terms
3
Lj0g3v0357369.1
– 3-5 exonuclease/ nucleic acid binding protein [Medicago truncatula] gi|357448871|ref|XP_003594711.1|
GO terms
3
Lj1g3v1596960.1
– PREDICTED: double-strand break repair protein MRE11-like [Glycine max] gi|356542248|ref|XP_003539581.1|
GO terms
4
Lj1g3v3976000.1
– PREDICTED: exosome component 10-like isoform X1 [Cicer arietinum] gi|502107238|ref|XP_004493202.1|
GO terms
3
Lj3g3v0681540.1
– PREDICTED: double-strand break repair protein MRE11-like [Glycine max] gi|356542248|ref|XP_003539581.1|
GO terms
4
Lj3g3v2905160.1
– Exosome complex exonuclease RRP6 [Medicago truncatula] gi|357471299|ref|XP_003605934.1|
GO terms
3
Lj3g3v2906190.1
– Exosome complex exonuclease RRP6 [Medicago truncatula] gi|357471299|ref|XP_003605934.1|
GO terms
3
Lj3g3v2908390.1
– Exosome complex exonuclease RRP6 [Medicago truncatula] gi|357471299|ref|XP_003605934.1|
GO terms
3
Lj5g3v0348750.1
– PREDICTED: exonuclease 3'-5' domain-containing protein 1-like [Cicer arietinum] gi|502125450|ref|XP_004498930.1|
GO terms
3
Lj5g3v0348750.2
– PREDICTED: exonuclease 3'-5' domain-containing protein 1-like [Cicer arietinum] gi|502125450|ref|XP_004498930.1|
GO terms
3
Lj6g3v1008190.1
– PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max] gi|356523231|ref|XP_003530245.1|
GO terms
3
LotjaGi1g1v0227800.1
– Werner Syndrome-like exonuclease; TAIR: AT2G36110.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase; TrEMBL-Plants: tr|C6T412|C6T412_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0227800
GO terms
3
LotjaGi1g1v0227800.2
– Werner Syndrome-like exonuclease; TAIR: AT2G36110.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase; TrEMBL-Plants: tr|C6T412|C6T412_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0227800
GO terms
3
LotjaGi1g1v0573100.1
– Werner Syndrome-like exonuclease; TAIR: AT3G12410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q84LH3|WEX_ARATH Werner Syndrome-like exonuclease; TrEMBL-Plants: tr|I3SWT4|I3SWT4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0573100
GO terms
3
LotjaGi1g1v0573500.1
– Werner syndrome-like exonuclease; TAIR: AT3G12460.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase; TrEMBL-Plants: tr|A0A0S3RUI4|A0A0S3RUI4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0573500
GO terms
3
LotjaGi1g1v0607200.1
– RNA exonuclease 4; TAIR: AT3G27970.1 Exonuclease family protein; Swiss-Prot: sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4; TrEMBL-Plants: tr|A0A0R0EJ11|A0A0R0EJ11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0607200
GO terms
2
LotjaGi1g1v0607200.2
– RNA exonuclease 4; TAIR: AT3G27970.1 Exonuclease family protein; Swiss-Prot: sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4; TrEMBL-Plants: tr|A0A151QYX1|A0A151QYX1_CAJCA RNA exonuclease 4; Found in the gene: LotjaGi1g1v0607200
GO terms
2
LotjaGi1g1v0607200.3
– RNA exonuclease 4; TAIR: AT3G27970.1 Exonuclease family protein; Swiss-Prot: sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4; TrEMBL-Plants: tr|A0A0S3RW52|A0A0S3RW52_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0607200
GO terms
2
LotjaGi1g1v0646900.1
– 3'-5' exonuclease domain-containing family protein; TAIR: AT5G35910.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein; Swiss-Prot: sp|A9LLI7|RP6L2_ARATH Protein RRP6-like 2; TrEMBL-Plants: tr|A0A151TSU8|A0A151TSU8_CAJCA Exosome component 10; Found in the gene: LotjaGi1g1v0646900
GO terms
3
LotjaGi2g1v0108600.1
– 3'-5' exonuclease domain-containing family protein; TAIR: AT5G35910.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein; Swiss-Prot: sp|A9LLI7|RP6L2_ARATH Protein RRP6-like 2; TrEMBL-Plants: tr|I1MW66|I1MW66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0108600
GO terms
3
LotjaGi2g1v0197200_LC.1
– Werner Syndrome-like exonuclease; TAIR: AT5G48350.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|B4JF25|WRNXO_DROGR Werner Syndrome-like exonuclease; TrEMBL-Plants: tr|V7CGU9|V7CGU9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0197200_LC
GO terms
3
LotjaGi3g1v0024300.1
– RNA exonuclease-like protein; TAIR: AT3G27970.1 Exonuclease family protein; Swiss-Prot: sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4; TrEMBL-Plants: tr|A0A0B2RL39|A0A0B2RL39_GLYSO RNA exonuclease 4; Found in the gene: LotjaGi3g1v0024300
GO terms
2
LotjaGi3g1v0024300.2
– RNA exonuclease-like protein; TAIR: AT3G27970.1 Exonuclease family protein; Swiss-Prot: sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4; TrEMBL-Plants: tr|A0A0B2RL39|A0A0B2RL39_GLYSO RNA exonuclease 4; Found in the gene: LotjaGi3g1v0024300
GO terms
2
LotjaGi3g1v0078900.1
– Double-strand break repair protein Mre11; TAIR: AT5G54260.1 DNA repair and meiosis protein (Mre11); Swiss-Prot: sp|Q9XGM2|MRE11_ARATH Double-strand break repair protein MRE11; TrEMBL-Plants: tr|K7LWB6|K7LWB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078900
GO terms
4
LotjaGi3g1v0078900.2
– Double-strand break repair protein MRE11; TAIR: AT5G54260.1 DNA repair and meiosis protein (Mre11); Swiss-Prot: sp|Q9XGM2|MRE11_ARATH Double-strand break repair protein MRE11; TrEMBL-Plants: tr|K7LWB6|K7LWB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078900
GO terms
4
LotjaGi3g1v0078900.3
– Double-strand break repair protein MRE11; TAIR: AT5G54260.1 DNA repair and meiosis protein (Mre11); Swiss-Prot: sp|Q9XGM2|MRE11_ARATH Double-strand break repair protein MRE11; TrEMBL-Plants: tr|K7LWB6|K7LWB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078900
GO terms
4
LotjaGi3g1v0078900.4
– Double-strand break repair protein MRE11; TAIR: AT5G54260.1 DNA repair and meiosis protein (Mre11); Swiss-Prot: sp|Q9XGM2|MRE11_ARATH Double-strand break repair protein MRE11; TrEMBL-Plants: tr|K7LWB6|K7LWB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078900
GO terms
4
LotjaGi3g1v0155200.1
– RNA exonuclease 4; TAIR: AT3G15080.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q91560|REXO4_XENLA RNA exonuclease 4; TrEMBL-Plants: tr|A0A151R8G2|A0A151R8G2_CAJCA RNA exonuclease 4; Found in the gene: LotjaGi3g1v0155200
GO terms
2
LotjaGi3g1v0466600.1
– 3'-5' exonuclease domain protein; TAIR: AT2G32415.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein; Swiss-Prot: sp|A9LLI8|RP6L3_ARATH Protein RRP6-like 3; TrEMBL-Plants: tr|A0A151S0B7|A0A151S0B7_CAJCA Exosome complex exonuclease RRP6; Found in the gene: LotjaGi3g1v0466600
GO terms
3
LotjaGi4g1v0197800.1
– DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800
GO terms
3
LotjaGi4g1v0197800.2
– DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800
GO terms
3
LotjaGi5g1v0023500.1
– 3'-5' exonuclease domain-containing protein; TAIR: AT5G24340.1 3'-5' exonuclease domain-containing protein; Swiss-Prot: sp|Q8N9H8|MUT7_HUMAN Exonuclease mut-7 homolog; TrEMBL-Plants: tr|A0A151TVU6|A0A151TVU6_CAJCA Putative exonuclease mut-7 isogeny; Found in the gene: LotjaGi5g1v0023500
GO terms
3
LotjaGi5g1v0039700.1
– Exonuclease 3'-5' domain-containing protein 1; TAIR: AT2G25910.1 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; Swiss-Prot: sp|Q8CDF7|EXD1_MOUSE piRNA biogenesis protein EXD1; TrEMBL-Plants: tr|I1MXE7|I1MXE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0039700
GO terms
3
LotjaGi5g1v0228600.1
– Werner syndrome-like exonuclease; TAIR: AT1G56310.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q8N9H8|MUT7_HUMAN Exonuclease mut-7 homolog; TrEMBL-Plants: tr|A0A0B2QKP3|A0A0B2QKP3_GLYSO Putative exonuclease mut-7 like; Found in the gene: LotjaGi5g1v0228600
GO terms
3
LotjaGi5g1v0243100.1
– Werner syndrome-like exonuclease; TAIR: AT5G48350.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|B4JF25|WRNXO_DROGR Werner Syndrome-like exonuclease; TrEMBL-Plants: tr|A0A0L9TY24|A0A0L9TY24_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0243100
GO terms
3
LotjaGi6g1v0040600.1
– Werner Syndrome-like exonuclease; TAIR: AT4G13870.2 Werner syndrome-like exonuclease; Swiss-Prot: sp|Q84LH3|WEX_ARATH Werner Syndrome-like exonuclease; TrEMBL-Plants: tr|I3SIM3|I3SIM3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0040600
GO terms
3
LotjaGi6g1v0163900.1
– DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J1V4|G7J1V4_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi6g1v0163900
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0008408
Molecular function 3'-5' exonuclease activity 1 2.33