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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0485100 |
| Transcript ID | LotjaGi3g1v0485100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA ligase; TAIR: AT1G08130.1 DNA ligase 1; Swiss-Prot: sp|Q42572|DNLI1_ARATH DNA ligase 1; TrEMBL-Plants: tr|A0A072UVT2|A0A072UVT2_MEDTR DNA ligase; Found in the gene: LotjaGi3g1v0485100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90223559..90234798) extracted from Lotus japonicus Gifu genome v1.2.
AACATCCCCAATCCCAAACGTGCCAATTTTTCTCTATATTTATCTCTTCATATCAAATCATATTAATCACTTATCTCCTA TTTCAAAAAAAAAATCACTTATCTTGTATTCTTTTCCATTCTCACGTGACAAAAGCAAACAAGTAAAACATGGTGGCTGG GTGGGTTATTGGCATGAAACAAGTCCCAAAATCCAATCTTCCCGCCACTGAGCCATCTACCCCATTTTCCCGGCACATCC ACTCAGTGCAGTGAAGTGCCACCACTTTCATGATCCATTTCCGTCCTTACCTCTCTCCCCCATTCTTATCTCATCATCGA ATCACCGCCGTCAAGCTTTTCTCTCTTCCCTTTCTCACCCTCCCTCGCCGCGCCATGTCCAAACCACCCTCCGCCTTCGA CGCCCTAATGTCCGGCGCACGCGCCGCCGCCGCCAAGAAGAAACCACCTCCACCTTCCGCCGCATCCCCCAAGAAACGAA AATCCCCTCACTCCTCCCCAGCCCCCGCCCCCACCCTAAACCCTAACAACCTCAAAACCCCCGAAACCGTTCAACCGCCT AGGGATTCAGTTGAAACCGTTCAACCGTCATCGGAAGAAGCCGTTGAAACTGTGCTTCAACCGGCGAAGAAGATTTGCAA CAGCAGCGGGTCTTTGATCGCCGAGTTGAAGGAGCTGGCCCCGAGGCTCAAGAAGAAGCCGTCGGAGTTCGATCCGAGTA CTGTGGTTTGCTGGGAGAAGGGAAAACCCGTGCCGTTCCTGTTCTTGTGCTTGGCGTTTGACATGATTGACAAGGAGTCA GGGAGGATTGTGATCACGGACATTGCGTGCAACCTTCTGAGAACGGTCATACACGCTACGCCGGAGGATCTTGTGCCGGT GGTCTATTTCCTTGCGAATAGGATTGCTCCGGCGCATGAAGGGTTGGAATTGGGAATTGGTGATGCTTCCATTATCAAGG CGCTCGCGGAGTCTTGTGGAAGGACTGAGTCGCAGATTAGGAAGCTGAATAAGGTCTTTGGTATTTTTGTTTGTTTGATT GATTGTTGTATTTTTTCACACAAATTGTTTTCGAGAGTTGAAATTGATTCTTGTTTGTGTAGGATAGAGGTGATTTGGGA TTGGTCGCCAAAGAGTGCCGTTCATCTCAGTCAATGATGCGGAAGCCTGATGCATTGACTATAAGGAAGGTTTTCACGAT CTTTCGCCTCATTGCCAAGGTGATGGTTTGGATGTCATTATCATGATTTTGGATTATTCACATTATTGCTTAGGTGTGAC TGTTTTTGTGTTGTCTACAGAAGTTTGGTCTTTCTCAAATATCTTTTTTTAGTTGTGACGAGTAAGCAATGCAACTTGGT TAACTGATGTAGGGTTATATTTGAATTGTTAGACCACATTAGGGTTGTTAATAGCATGTATTTGTAGTGGCGTGTAGCAG CCGCTCTTAGTAGTAGCGTAGCAATGCAGTTCATTGTAGTGACTGTTGCGGCCACCATAGCAGAGGAAACAGCAGCCGTA ACAGCGCTATTTGGTGGAGCTGATAAAAACCCACAAAGTGCCCTAAAAAAGTTAATAGTAGAGCATTTGTGGGGATATTT TAGGTTCTGAAAAGGGTCTAGTTTGAGAAGGAAGTGATATAGAGGAAGACTTGAATCTAGAAGTGGATGATAGATGATTC TTGTCTAGGAAGCTTTTATTTGAATTTTCATGTTTTTAGGCAGTCTAGTTTAAGCATTAGAGGATTAAACTTTTTGGTTA CCTTGAATTTTTACTTGTATGTTTTGTTTAAGATACCTATGACTTCTTATTGTTAATTATGAGTGTCATGAGTTATAAGT ATTTTTATAAATTCTTAGCATTTATATATGTATATAGTTAAATTATAGAAACTGTTTAGAAGTTTCAGCATGGTGACCAT CCCGCTATGCACATACCACTATAGCATTTTTGGGGTTGGCCTATACGCTCCGCTGTCCGAGATCGACACCACTGAATTAT TTAGGATATTGTAAATGGGTAACGAAAGTAAAACCCAGTGAAACATGAGACTTTTCTAGGATCGGTAGTTTATTGCTTTA GTTGTATTGTCTAAGGATGGTAGAAAGTAATGTGTTGACCAGAGGGAGAGAATTGGCAAATATGAATTTGGATATAATCT TGATATTGAAGGCTTGGATTGTGTTACTGGTGCTCTTTTTGATATTGTAATCACAACTGTTTTGACAACCATTTTCAACT CATTTGTTGATACTCAACCATGGTTAGAGAAGTTTATTTTACTTTACATTGTGTGTTTATTTTGATATTTAAATTCCATG TCCTATGTTTGGCGTGCATGTTGGATGTTAATAGGTACTTGCTGTGTCCTGCAAGTGAATGAAAGAAAATAATTGGGATT TGGAACAATTTACAATTGAAAGCTGAATGTTGCAAGAGTTTGCTACTAATTTTACCTTATTTCTATACATGTTCAACAGG AATCTGGAAAAGACAGTCAAGAGAAGAAAAAGAATCATATAAAGTCTCTTCTTGTTGCTGCAACTGACTGTGAACCTATA TATCTAATTCGTTTGTTACAGGTTAAAATTGTACTTATATTGAAATAATTTAGCGGTGTTACTACTCCATATTAATTACT TCTTGGGGTTTTTCTTGTAGACAAAGTTGCGAATTGGATTAGCTGAACAAACTCTCTTAGCTTCATTAGGGCAGGCTGCA GTGTACACTGAAGAACATTCTAAACCACCTCCTGAAATTCAGTCTCCTCTAGAAGAGGTAAGCTAAACTGATGGGGATTG CAAATATGGCGCAAAGTGAATTGGTTTAAATTACTTAATTTTTTCGAGGCCAGGATGAATGGCAATACGTGCTTTGGGGT CTAAACCATTAGGTTGCATTGGCACTAAAAGTTGGATGGGGGTCTGTTGCTGAAATAGGTGTTAGTGTATTATGGTGATT ATCCCAACTATTTTCCATATTATATTTTTATTTTTAGTTTCATTGTGCATCAGGCTGCAAAAATCGTTAAACAAGTCTAT TCTGTTCTTCCTGACTATGACAAAGTACTGTCTTCACTGCTTAAGGATGGTGTGTGGAAACTTCCAAAGACATGTAAATT TACTCTTGGTGTTCCTGTCGGGCCTATGCTTTCCAAACCAACCAAGGGTGTATCTGAAATTCTGAATAAATTCCAGGATG TAGAGTTTACCTGTGAATACAAATACGACGGAGAGCGTGCTCAGGTGATACTTCATGGTCAAATTTTCTATGAGAAATAT ACTGCTTTTGGTACTTATTATGTGCAATAAAATAACATTAGCTCTATGGAGACAGATACATTACATGGAGAATGGCTCAG TTGAAGTTTACAGCAGAAATGCAGAATGGAATACTGGAAAGTTTCCTGATGTTGTTGCTGCAGTTTCAAGGTAAAAAAAC ACATGGAATGAAGAGTACTGTATATGAAGTTTGGTAGCATCTGTTCAACTAGCATAGTTTCTGATATTTACCTCTAGTGA ACAGGTTAAAGAAAACAAGTGTATCATCATTTGTTCTTGATTGTGAAGTTGTTGCATATGACCGTGCAAAACAAAGAATC CTTCCTTTTCAGGTAATCTCAATATGGTTCTGTATTTTTATGGGTGTCAATACATCATTTTGATAGCGTATCTATGTTGT CATTCAATAAAATGAAATTGTTTTAATTAATGTCTGTGTTGTTTTATCTATCTTGGTGATGCACCTTTCCAATTTCTGAT ATTTTGTTTGAGGAGGTAAGATTAGACATATGTTTATAATGAAATAGTCTAATATCTTGACAGGTGCTTAGTACTCGGGC TCGCAAAAATGTAGCTGTGAGTGACATAAAGGTTGATGTTTGCATATTTGCCTTTGATTTGTTGTATCTTAATGGTCAAA TACTTCTTCAGGAAAACTTGAAAACTCGTAGAGAGGTACCAACTTTTATCTTTTCTCTGCAAATAGTTCATTTTATTGCT TTCTTTATTAAGTAGTTGAGTCAATGATTGTTTGCTAAAAGGTGGAAACCTAGAAAAAAAACTGTTCTACTTTTAAGATA AAAGTTAAAGCTATCCACAGAGTTATAAGAGGATATATTTGGTAGAAGGGTAGAATAAATAGGAGTTAGAGTAGTTAGGA TTATTTGGGGCAGTTGGCTAAAGGAGACTCAATTAGATATATAAGGGTCTGTCGTAGAAACTAGAAAGGAGATGTTGAGG GTATAGTATTTGAGAGAACCAAGCAAGACCTTCGATGAGAAGGGGAACGCTTGGGGTAGAGTTTTTTCCCCCACTTGTAT CCATTCATACAATAAAATGGTTATTTCCATTTTGATGTTTTTAATCAATTTTGCTATTCTTGAATTTGGGTTTGTAACAA ATTGAGTGTAGGCTTTTGGGTCGACATCCTGCCTTGGCAAAGCTTGGGTGGATGATAGCACTGTAGAGCTTGGATTTTTT TATGTTTGATAACCCTATCAGTTAGTTGAAATAGTTCGGGAGTTACACAGTAAAGAAGGGTTGTCAACAACACACTATAG CGCCGTAGCAGTGTGTAGCACAGTCCCTGGCCGGCGGCCGCTTCTATTTGTAGTGTAGTGGTGCAGTTTAGTGTAGTGGC TGTTGTGACCACCATAGCGGAAGTAATAGTGGGCACTATTTGCCCATTATTTGGTGGAACTGATAAAAAAAAGCCCTTAA AAAAGTCAAATTTGGGGCATTTTTTGGGGTGTTTTAGGGTTTTTGCTTCGGAAACATGCTGAAAATGATCTAGTTGGAGG ATTGATCTAGTGGAAGTGAGAAAGAGGAAGACTTTGGATCTACAAGAGGATGGTTGATAATTCCTGTTTAGGGAACTTAT ATTTCAGTTTTTATGTTTTTAGGCAGTTTAGCTTAAACTTCTTTGTTACCTTCTGCCGGTACCTGTAGTTTTGTTTAAGA CCATTGACTTTTTATCATTAATTATGAGTGCCATGAATTTTGGAGTATTTTCATCATTTTGAGCCTTTATATATGTATAT AGTTAAAGGGGAATGCTATGATACACCCACTACCTTTTATGAAGGAGTATTATAGCAAACAACACCTTTCTATTTGGACA AAAACACCCTCACCTTCACCTTTTCAAAACACTTAAAGTTGGGATACAATGGTAATTAGACTTATTCTTCCCCTTTTCTC CTTCCCGAAACCACGAGCCTCTTTCTTTCGATTTTTTTACCTCATCGTTGTCACTGATCGCACGGAGGGCCGCTGTCACG CCGTTGCTTTCGATTCGTTCGCCGTTGATGTTGATGTTCCTCTGTTTTCTCCAGCATTGAGTCTTTCGGCGTTTGTCGTC ACTATGGATTGTTAACAGAGCGTCGTTCATCGCGTCGTTTATTGTCACCGTTGCTCGCACAGAGCCACGCTGGCCGTCAC TCCGTTTGCCTTCAATTCACTCGTCGTTGAGCTTGATGTTGATGGCAATGGAGTTTGGTTCGTCAATTGGGGCTGCGATT GTGAAGGACTTGGTGTATGCAGCCACGCCAAATTTGTTATTCCTCCTGCTTCAGTATCTGTGCCATTCTTGGGGATGCGA TTGTGAAGAAGTATGCTGGTTAAGATAGGAAATCAGTATGTGATTGTTGTTTTGTGAAATTGAGGATTAGAGATCTCCAA ATTTCATTGTTACAGCTTTCATTGTTATAATGTAATATGGTTTTGAAATACTACCAAAATGGTTTTCCAAAGATCATTTT AAAAATACACCCAACGAGATGCTTACTAAAGGTAGTGGGTGTATCATAGCATTCCCCTAAAAATTATATAATTTTATAAA AATTCAGCATAATGACCATCCCGCTATGTGCTATACAGCTATAGCATTTTTGGGGGCGGCCTCTATGTGCTGCTATCCAG GATTTGCGATGATAGGTTATAGATAATAAAAAAAAAGAATAGAGGGGCTTGTCTTGAGATTGGAAAGGAAATCAGGGAAG GAAGTTATAGGTCCCTTGAATACCTGGATGTAATAGAGATTTTCTATCAATTAGCTCCATTTTCTTCTTTATTCTGAACA ATACCTATTAACTAGTATTAGTGTTCCAATCTTGGGGGTGTGGATGCATCTTCAAACTGATCCACTAGTATTAGAGCTGA CATGAATTGCTAGGGAGTTGACCTCTGGTGCTGTGTTTCTGTCTTGTTAGAGTTGGTGAGCTTGTATGGGTTAATAATGC AACATGTTTTCGGGTGTTTTACCTACAAAAAAAAAACGTGGCATCCAAGTGTGGTGCTTGACTCATTGATCTACATAAGA AAGGAATTTGGCGTTGGCTTAATGATATTTACAGAAGTCAAGGTTGGTGGAAGCAAGATTTGGGTCCAATATATGCACTT AGCGTAATAGGATTAATGAGCTTATCTGCACATTGTACAAATTCAGTTTCATCTAGAGTCAGAATTTACAAAGTTGATGC TTTCCACAGCAAAGTTGGAAGTCAAGGGTTGAATTGAACAAAAGCATCAAGCCTCAAAAAATTCAGCTGTTTGGAAATGA ACGAGTCACCCTGGTGGCAAGTGAACTTTGGCAGAGGTTGGTGTGTATTTGTGTTGCTTGTGGGAGTAGTTAAGTTGAAA AGGGTTGAGCGCTGACTGATAGCTTTAGCTTATGGCTGTTTGCTAAGCTCTCAATATAATATTTGTCACAAATGAAAATG CAATAAATCCTAGTTAGATGGCACAAAATACCAGGTTCTTAAATATTTTCAGTTTGCTAGGGAGGCAGGACAATTGGATC TCTGTTACGCTGTTTATCAAACGTTAACATTCCAAAATATTACGAATGAAATATCATGTATATGTTATGAATTGTCTTCT CCCGTTAGTTATGGGCTAAGTCGATGAATATCATGTGATATATGTTTTGATGAATGCCTACTTTTCTGACTGCAGCATCT CTATGCCTCTTTTGAGGAAGAATCTGGATATTTTCAGTTTGCAACAGCAATAACATCAAATGATGTTGAGGAGATACAGA AGTTTCTTGACAAAGCCATTGGTGCAAGGTCTTAATTGATTCTTCTTGTTCATTTAAATTCACGATGATAGAAATTTCAT GATTTGGGTTAAAATTATACGCATCATTTTAGCATAATTTAGTATACTCTTTTTATTTGGTTACATGGAGGGGCAAGGCC CCATTTAGTATACTCTTTAGTTATCTTATCAGATTGCACTATTTTTAAAAGCATTTGATAGACACTAGAAGACATACTTA GTCCCCGTTTGTTTTACAGTTTGAAGCCTTCCAAACATAATAAGTTGGGGCAAAGGAGAGTTCTTGCTCCTTCTCACAGA AGTGTAAAAGTGTTTCACAATATGAACCTCCATTGATAAAACTGCAAAACAATGAGCTCTTAATTGTATATCTAACTTCC ACAGCATTTCCAGCTTTGGTTTTCCTTGCAAAATTTTCAACACGCAATTTTGTCATTTATTATTTGGCTCTTCTCTTAAT TTGCAGTTCTGAGGGATTAATCATTAAAACATTAAATGAAGATGCTACATATGAACCTTCCAAGCGGTCACTCAACTGGC TAAAACTGAAGAAAGATTATATGGATAAGTAAGGATGTGATATTTATTTTTCTTAATTTAATATTTTAATTTTGTCTTAA TGGATTTTTATTTATTCTTTGGCTCTAATTTGCAGTATAGGAGACTCACTAGATTTAGTTCCTATTGCTGCTTTTCACGG TCGTGGGAAACGTACAGGTAATAACGAAATCCCTAATTTGGTGATGCCCATATTTAATACTTGTCAACTTTAAGCCAGTG TCCTCCAATGTTTCACATCACATCTGATCTGAAAAGGCCTGGCCCTTGGTATTTTTATATACTGCTATTATAAACATTTA GCTCAAAGTTCTCTGAAATGAAAGTGGCATGAGGTCTTGTAGGAGTCTATGGTGCCTTTCTCCTTGCTTGCTATGACAAC AGTAATGAAGAATTTCAAAGTATTTGTAAGATTGGTGAGTATATTTATGTTGTTAAGTCACTGCTCACTACTGAGCTCTT GTGTTTATTAAACTTATTCTCTCTCATAATCTTCATATCATGGTGGGTAGGAACTGGATTCTCTGAAGATGTTCTTATAG AGCGTTCTAAAGGCCTCCAGACTAAAGTCATTCCGAAGCCAAAGGTCCCCCCTTCCTCTTGTTTCTGTCTGAACCTTTTA TAAATGCTGGTTAATATTTTATGAACTAATTAAAAAAGGCTTTGTTTTCAGGCCTACTATCGGTATGCAGAAACAATAAA TCCTGATGTTTGGTTTGAAGCCAGTGAGGTTAGAAATCTTAACTTTTCTTGGCAATTGCATTAATTTCGTTCCCAATACT GTCCTATGACTTACTATCATTAATGAGTTGTCTTAATTTTTTCCCCTTATTGGTAGTACTGTGCCCTTGTTTTATAATTC CTATTGCTTCAATAAATGTCTGCAAGCATTTTCATACTGTGGGATACTATCATAGTCTGATGCCTCTTAATCATGGCTGA AAATTCTCCCAATATAGTCAAGCCGTCTCATTGGGTTGAGAATTTATATGTTGTTTGCAATCCTCAGTTTTTCATATTTC CTTCTGGTTCCAGTGTAAGCCTTAGCATTGGATGTGGAGTTATGTTGGGAAGGTGTATTTCTAATTACGTATAAGAAAGG TTGAGTGCAGGATGTGGCCTGTCAATTCTTCCTTATTCCTTATTCCCAATTTTTTTAAGAATCTGGGAGAAATTGAGTCT TATTTCATACATATCAAATGGCACAACAAATCAGTGTTATCAAATATCTGCCATGGCAGGTTTTTGGCTCTCCACCACCA TTATTTGTCAAATATGGCGGATTTTTGGCTCTCTGGCATAGTCTGCCATCTGCCATTAACAACACTGATATAAATACATC TAGTTAATAAATGCAGACATGATTCATTTGCAGAATTTTTTTATAGGCAAATTCATTTGCAGAAGTAATGCACTAATGCT AATACCCTAAGAATGGAATTCCAGTGCAATTAACTATACTTTCTGTTTTTAATACACTATTTTCTAGGGTAATTAATTGA ACATAACTTCCACACTTACCTTCTTGAAGCCATGTCAGCAAAATCTTAATATTTTTTATTTCTCATCCATTGTCTTTCTA ATTCCTCTTTTGTGCATTCTCTTCTCATCTTTCTTTTGTAACATCTGGTTCTTAAATACTATGTATCTCTGTCTAAGTTG GCTTTTCCTTTTATTATGTAGGACGATACATAACCTAATTAGCTTGACCACATTTGTTGACAGGGCTACCGAATCACTCA CTGTCCCTCACTCTACTCTCATTCCATTATATAAAATCAACAGATCTTTCTTTCTCACTAATCCCAATAGGGTTTAGGCC TATCCATTTTTGTTGTTTACGCCAAATGTCACCAAATAAATAAAATTATGAAAACCATGATGATTGTTATTTTTAGAGAA ATGGAAAATTACTTGTTCTTGAACAATATTTAAATTAATTTATTGGGCAGTTCTGGCAATGTGCGGATACAGTTCTAGTT TTTATAATCCTAGGATCCTCTGGCCATGTAAACCATCATGAATTTTTGCCCATGCCTTTTTATTTTTTATTCTTTTTGAT CCAAGAAAATTGTGTTATGGTCTATCGAATTTCATCTAGGTGTGGGAGGTGAAGGCTGCAGACCTGACTATTAGCCCCGT TTATCGAGCTGCAGTGGGTATTGTAGATTCAAACAAGGTATTGGAAACAATGGATCTCTGATGGATGTCAGTGTGTCCAT GTCTTCATTTTAGACTGCTACCTGTTAACATTCTTTAGTTGATACTTCTCAATTTTCTTTGAAGGGCATATCTCTTCGAT TTCCACGCCTACTTCGAGTACGGCCTGACAAAGATCCTGAGCAGGCCACATCGTCTGAGCAGGTAAATTACAATGGAAGA TCAAACAAGAGTAATGGATGGAGTGAAAATTGAACTAATGGTTCCTTCTTTACTTATTTTGTTCAGGTTGCTGAAATGTA TAATGCTCAGAAACACAATCAAACGGACAACCAAAATGACAATGAAGATGATTGAATGAAATTTCTTTTGCCATGCTTCT CTTATGCCCGTTAAACTATGAAACAGCGTTGTTTAGAAGCAAATCGTTGCCTTCAAGCATAGGTCAGAAAGCATAATTGT TTGTTCAACATGATTGGAAATTTTATATACAAGGAGTAAGCTCATGGAGGGTCCAAAAAGTAAAAAATTTCCGCTTAAAG CATGTTATTTTGATTTTTTTTTCTTCCAGAAGGGGCCCTTTCGCCTGGAACTGCTTGTATATGTTTCTGATTTGTTCCTG TAATGCTACAGTTAATTCTGCTAGAATTCACTAAAATCTGATTAACATTTCACACATGCTCATTTGTCAAGTGATTTACA GTGGCACATGTCTTGAACATAACATGTGTCTGATTTATTCAATCATTGCTCTTGTTGGATATTGTTAAATATCTTAATAG AGACCACGAATCAAACAGGGTAGAAGCAACAGCTAACCAACAACAATAACCATAGAAACATCATTCTTGGATACAACCTC CACCAGACCAGCGACGTATAGAGGAAAACAAATGCCGGAGGTGATTGACCGTGGTCTTTATTAAGATATTGTACAATATC CAACAGCTCTAAAATGAAGCTACAGTGAAGGCTGCTAGCTAGATTTGACGAAGAGCAGCTTAACATTTTGCACATGCAAT TCTCAATTGCTTAGTTCATTGTCAAATGATTTACCGTGTCACATGTTCTGTGGAGCTTATGTTTTTTGGACAAACATGTC TGATAGAGCTGTATCTATTGCTTTTCAACAGTGAAATGTGTATTGGGCCTTGTTTCTATTTGTAGATGTCGCTATTTCAA ATATCTAATTCAAATGCTCACAGTGACTTGACTCAGAAGATAAGATTGAATATTATTTCCAATAGTGGAAGACGGGTTTT CTGGAAACCAGAGAACCTTAATCGAGAAAAAAGGACTGGATTCAATGATTGCCGTGAAGGAGACACTTAGGTACATATCT GCCTAATGTTTTTGAACTATGGTTGGGTATGAATGAGTATCTAGTCAAGCCATTGATAATCTTCAAGCTTTAGCGTTCTG TAGAATATGCTCCCTAAACCGTTTTCACTTTAAACCCAGC
CDS sequence (LotjaGi3g1v0485100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCCATTTCCGTCCTTACCTCTCTCCCCCATTCTTATCTCATCATCGAATCACCGCCGTCAAGCTTTTCTCTCTTCC CTTTCTCACCCTCCCTCGCCGCGCCATGTCCAAACCACCCTCCGCCTTCGACGCCCTAATGTCCGGCGCACGCGCCGCCG CCGCCAAGAAGAAACCACCTCCACCTTCCGCCGCATCCCCCAAGAAACGAAAATCCCCTCACTCCTCCCCAGCCCCCGCC CCCACCCTAAACCCTAACAACCTCAAAACCCCCGAAACCGTTCAACCGCCTAGGGATTCAGTTGAAACCGTTCAACCGTC ATCGGAAGAAGCCGTTGAAACTGTGCTTCAACCGGCGAAGAAGATTTGCAACAGCAGCGGGTCTTTGATCGCCGAGTTGA AGGAGCTGGCCCCGAGGCTCAAGAAGAAGCCGTCGGAGTTCGATCCGAGTACTGTGGTTTGCTGGGAGAAGGGAAAACCC GTGCCGTTCCTGTTCTTGTGCTTGGCGTTTGACATGATTGACAAGGAGTCAGGGAGGATTGTGATCACGGACATTGCGTG CAACCTTCTGAGAACGGTCATACACGCTACGCCGGAGGATCTTGTGCCGGTGGTCTATTTCCTTGCGAATAGGATTGCTC CGGCGCATGAAGGGTTGGAATTGGGAATTGGTGATGCTTCCATTATCAAGGCGCTCGCGGAGTCTTGTGGAAGGACTGAG TCGCAGATTAGGAAGCTGAATAAGGATAGAGGTGATTTGGGATTGGTCGCCAAAGAGTGCCGTTCATCTCAGTCAATGAT GCGGAAGCCTGATGCATTGACTATAAGGAAGGTTTTCACGATCTTTCGCCTCATTGCCAAGGAATCTGGAAAAGACAGTC AAGAGAAGAAAAAGAATCATATAAAGTCTCTTCTTGTTGCTGCAACTGACTGTGAACCTATATATCTAATTCGTTTGTTA CAGACAAAGTTGCGAATTGGATTAGCTGAACAAACTCTCTTAGCTTCATTAGGGCAGGCTGCAGTGTACACTGAAGAACA TTCTAAACCACCTCCTGAAATTCAGTCTCCTCTAGAAGAGGCTGCAAAAATCGTTAAACAAGTCTATTCTGTTCTTCCTG ACTATGACAAAGTACTGTCTTCACTGCTTAAGGATGGTGTGTGGAAACTTCCAAAGACATGTAAATTTACTCTTGGTGTT CCTGTCGGGCCTATGCTTTCCAAACCAACCAAGGGTGTATCTGAAATTCTGAATAAATTCCAGGATGTAGAGTTTACCTG TGAATACAAATACGACGGAGAGCGTGCTCAGATACATTACATGGAGAATGGCTCAGTTGAAGTTTACAGCAGAAATGCAG AATGGAATACTGGAAAGTTTCCTGATGTTGTTGCTGCAGTTTCAAGGTTAAAGAAAACAAGTGTATCATCATTTGTTCTT GATTGTGAAGTTGTTGCATATGACCGTGCAAAACAAAGAATCCTTCCTTTTCAGGTGCTTAGTACTCGGGCTCGCAAAAA TGTAGCTGTGAGTGACATAAAGGTTGATGTTTGCATATTTGCCTTTGATTTGTTGTATCTTAATGGTCAAATACTTCTTC AGGAAAACTTGAAAACTCGTAGAGAGCATCTCTATGCCTCTTTTGAGGAAGAATCTGGATATTTTCAGTTTGCAACAGCA ATAACATCAAATGATGTTGAGGAGATACAGAAGTTTCTTGACAAAGCCATTGGTGCAAGTTCTGAGGGATTAATCATTAA AACATTAAATGAAGATGCTACATATGAACCTTCCAAGCGGTCACTCAACTGGCTAAAACTGAAGAAAGATTATATGGATA ATATAGGAGACTCACTAGATTTAGTTCCTATTGCTGCTTTTCACGGTCGTGGGAAACGTACAGGAGTCTATGGTGCCTTT CTCCTTGCTTGCTATGACAACAGTAATGAAGAATTTCAAAGTATTTGTAAGATTGGAACTGGATTCTCTGAAGATGTTCT TATAGAGCGTTCTAAAGGCCTCCAGACTAAAGTCATTCCGAAGCCAAAGGCCTACTATCGGTATGCAGAAACAATAAATC CTGATGTTTGGTTTGAAGCCAGTGAGGTGTGGGAGGTGAAGGCTGCAGACCTGACTATTAGCCCCGTTTATCGAGCTGCA GTGGGTATTGTAGATTCAAACAAGGGCATATCTCTTCGATTTCCACGCCTACTTCGAGTACGGCCTGACAAAGATCCTGA GCAGGCCACATCGTCTGAGCAGGTTGCTGAAATGTATAATGCTCAGAAACACAATCAAACGGACAACCAAAATGACAATG AAGATGATTGA
Protein sequence (LotjaGi3g1v0485100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIHFRPYLSPPFLSHHRITAVKLFSLPFLTLPRRAMSKPPSAFDALMSGARAAAAKKKPPPPSAASPKKRKSPHSSPAPA PTLNPNNLKTPETVQPPRDSVETVQPSSEEAVETVLQPAKKICNSSGSLIAELKELAPRLKKKPSEFDPSTVVCWEKGKP VPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLVPVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTE SQIRKLNKDRGDLGLVAKECRSSQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLL QTKLRIGLAEQTLLASLGQAAVYTEEHSKPPPEIQSPLEEAAKIVKQVYSVLPDYDKVLSSLLKDGVWKLPKTCKFTLGV PVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGERAQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVL DCEVVAYDRAKQRILPFQVLSTRARKNVAVSDIKVDVCIFAFDLLYLNGQILLQENLKTRREHLYASFEEESGYFQFATA ITSNDVEEIQKFLDKAIGASSEGLIIKTLNEDATYEPSKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVYGAF LLACYDNSNEEFQSICKIGTGFSEDVLIERSKGLQTKVIPKPKAYYRYAETINPDVWFEASEVWEVKAADLTISPVYRAA VGIVDSNKGISLRFPRLLRVRPDKDPEQATSSEQVAEMYNAQKHNQTDNQNDNEDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 41 | 775 | 735 | 0.0 | – | |
| PANTHER | 41 | 775 | 735 | 0.0 | – | |
| MobiDBLite | 50 | 111 | 62 | - | – | |
| MobiDBLite | 81 | 111 | 31 | - | – | |
| Gene3D | 138 | 406 | 269 | 7.3E-97 | ||
| SUPERFAMILY | 144 | 395 | 252 | 2.09E-80 | ||
| Pfam | 162 | 337 | 176 | 2.1E-41 | ||
| TIGRFAM | 220 | 759 | 540 | 5.4E-153 | ||
| Coils | 229 | 249 | 21 | - | – | |
| CDD | 393 | 611 | 219 | 5.0289E-139 | – | |
| SUPERFAMILY | 396 | 614 | 219 | 1.8E-53 | – | |
| Pfam | 404 | 608 | 205 | 1.3E-61 | ||
| Gene3D | 414 | 612 | 199 | 9.2E-76 | – | |
| ProSitePatterns | 428 | 436 | 9 | - | ||
| Gene3D | 433 | 558 | 126 | 9.2E-76 | – | |
| ProSiteProfiles | 510 | 646 | 137 | 42.42 | ||
| ProSitePatterns | 582 | 608 | 27 | - | ||
| Gene3D | 613 | 775 | 163 | 1.5E-59 | – | |
| SUPERFAMILY | 616 | 762 | 147 | 1.13E-46 | ||
| CDD | 616 | 761 | 146 | 1.4616E-91 | – | |
| Pfam | 633 | 744 | 112 | 2.9E-22 | ||
| MobiDBLite | 742 | 776 | 35 | - | – | |
| MobiDBLite | 751 | 767 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA ligase activity | Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+. | ||
| Molecular function | DNA ligase (ATP) activity | Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | ||
| Biological process | DNA ligation involved in DNA repair | The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair. | ||
| Biological process | DNA biosynthetic process | The cellular DNA metabolic process resulting in the formation of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one. |
Expression pattern of LotjaGi3g1v0485100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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