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LotjaGi3g1v0508400.1

Overview

Field Value
Gene ID LotjaGi3g1v0508400
Transcript ID LotjaGi3g1v0508400.1
Lotus japonicus genome version Gifu v1.2
Description Receptor protein kinase-like protein; TAIR: AT2G16250.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGK4|Y2165_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g16250; TrEMBL-Plants: tr|K7KHJ8|K7KHJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0508400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:92520778..92527091) extracted from Lotus japonicus Gifu genome v1.2.

GTGTAAATACTAAATAGGTTAAATACTAAATAGTATACATACGGATCCGGTATCTACCATTTATTTATTTCAATATAATA TACACTTTCCATGTGTTTGATCCGCATCCAAAGCAGAGTAGTGTAATGTAAGAACCTAAATACAAAGCCATTTTCCTGTC GTAACTAATACTAGACAGTGACACCTGAGACAGACAACCTTCAAGTTCAAGATGCAGCAGAAACACAAGTTTACTCTTCA CTGTTTACATTTTACATAGAAAGAGAGAAAGTGACAACTGAAGAAATAGAGAGAGAGAGTGAAGAACATAATAAAAGGAG TGATGTTGGTGGTGGGAGGGAAGCAGTAGTTTTGTTTATGCACACTCTTAGCTGGACAAGGCGGGATTTCCGGCGGTCAA ACCCGCCATACAACCCAACCGGTGCCGTATTCTCTTCTCTCTCTCTCCCTCCCACCAGTTCCACAACACTCTCACTCATT CAATACCATACCATACCCTTCCTTTAATTGTTGAAGAATCATTGGTTTTCCAAGACATAGAGATGAGAAGAAGGAGGAGA AGATGATGAGTAGCAGCACTGAAAGCGTCAAAGATTTGTCACCGCAAAGTTTGAACAATCAAAGCCTCGTGATTAAGGTA ACGTAACTCGTTTATTTTTCTTTTCCTTGTTGGAAAGTGAAAGTACAAGACTTTTCACAGAGAGAGAAAACAATTGAATA ACCAAATAAATAAATAAATACAACAGTGTTGTTGTTGTTGTTGTTTTTGTTGTTGTTCTTCTTGTTCTCCAATTGTGTTG GTCTATTGTATAACTCTATTCTCCAATTGTGTGTTTATTACAGTTACAGACATTGGTAGATACAAATTTGCATACGTATT TGGGAGTCAGATGGTACTAATGTTTGGATCCTTTGGTCAGCGCTTGTAATAAGACATGGTGAATCTGCTAGGCATGGTGT GGTTTGGACTCTTGTTCTTGTTGCTGTTTAACTTTGAGTTCACATTGGAGCAGGTTGTTGTTGAGCCACTGAGTTCAACC GCGGAGCGAGCTGCGCTGCTCCAGCTTCGATCCTCTTTGGGCTTGAGGAGCAAGGAATGGCCAATAAAGGGTGACCCTTG TTTTATCTGGAGTGGTGTGAGTTGCCAGAATGGTAGTGTTGTTGGCATCAACATCTCTGGCTTTAGAAGAACCAGGCTTG GGAAGCAAAACCCAAAATTTTCTGTGGAAGCCTTAGCCAATCTCACCCTCTTGGAGTTTTTCAATGCCTCCAATTTTCTT CTCCCTGGTGCTATCCCTGATTGGTTTGGTCAGGGGCTACCTTCACTTACAGTGCTAGATCTTCGTTCAAGTTCAATCAA TGGTGCTATTCCTTCAAGTTTTGGGAATTTAACAAGCCTCACTAGGCTCTATCTTTCTGATAACAATCTTACTGGGGTGC TTCCTGTTAGTCTTGGTCAACTCTTAGCACTTTCAGTGCTTAATCTTTCCAGAAATGCTCTTAGTGGGTCCCTGCCATCA TCAATTGTCTCTCTTGTGAACCTTTCTTCCCTTGATATTTCTGATAATTATTTATCCGGGTCCATTCCCACTACCATTGG GGCACTCTCCAAGTTGCAATACTTGAATCTTTCCAATAATGGCCTAACTTCTTCTGTACCTGCAGAATTGGTCAACCTTA GTGGCTTGGTTGACCTTGATCTTAGTGAGAATTCCTTCTCTGGTGCTTTGCCAGAACAGTTGTGGTCTCTGCCGAGATTG AGCTTCCTGGATGTCTCGAGCAATAACTTCACCGGTCCACTTCCTAATTCTAGTTCAATTTTTAATTCTACTGCTAGGGA GCTCAATATTTCTCATAATATGTTTTATGGAAGCCTCAGTCCTCTGCTTAGAAGGTTCAGTTCCATTGATGTGTCAAACA ATTATTTCGAGGGAAGGGTTCTAGACTTCAAGATTGATGTATATCTAGATAGCAATTGCCTCCAAAATGCAACTTATCAG AGGACACCAGTGGAATGTGCATCATTTTATGCTGACAGGGGCCTAACATTTGATAATTTCGGACGACCAAATTCATCAGG AGCTCCAGAAGCAAAAGGCTCTGGGAAGAGCAATAAAAACAAGATAATCTTGGCAGCAGTGTTGGGCGGGGTGGGCTTGA TTGCAGTATTGTTGTTACTAGTACTGCTGCTTCTATGCATTCGCAGGAGAAGTAATACAAATCAAAGGGGAAATGGTGTC GGCCCCGCTCCTCCTGGTAGCAGTCCTCCACATCCTGGTGTACCAATCAACTACTCAAATGTTGGAGACTCATTTACATA TCATCAGTTGCTCCAGGCCACAGGTGAATTCAAGGATGAAAATCTTATCAAACATGGGCATACTGGGGATCTCTTCAATG GTGTTTTGGAAAATGGGATTCATGTAGTTATCAAAAGGATTGACATTCGTTCGACTAAAAAGGATGATGACTTGTTGGAA TTGGATTTTTTCAATAAGGTTTCTCATCCAAGATTTGTTCCCCTGTTGGGTCATTACTTAGAAAATGAGAATGAGAAGTT CCTGGTTTACAAACATATGCCAAATATGGACTTGTCAAATAGCCTGTACTACAAAAAAACGCAATCTGAAGATGATACTT TGAAGTCATTGGACTGGATAACAAGGTTGAAAATTGCCATTGGAGCAGCAGAGGCCCTATCTTATCTGCACCATGAATGT AATCCACCCATTGTTCACAGGTATCTCCAAACTTCCTTCTTCCTCAATTTTGAAGATTTTTTCTACATTTAGTTCCTTCT TTTGAACAAGCTATTCTATTATGAAACAAACCTCATATGATGCATAGGTTTCCTATATCCTCCTCTCTGTAATTTAGTGC CTATATTGTCAGTTTGTTGAATATAGTGTAAACTAGAATTCTGACTTGATGGATTATTCCAAACTCCCTGGATGATTTAG GGAAATTGATAATTACCACTAATTTGGGCAGAATTTGTAGTATTGGGCGGGGAGGGGGGGGGGGGGGGGGGGGGGTTGGA GACAAAAGGAAAAAGTATATTTCATTAGCACTTATTTACTGCAATGCAACTCTTTGTTAAGCGATTTTATTTATGTACTT TTGATACAAAGGCTTGATGATTAATGCGGAAGTTTTTACTCCTATCTAGTTAAATTATAGCACGATAAAGTCATTGGTTG GCAGGGGCTGTGTGATTGATTTATGTCATTGATTTATATTTTAAAAATTCAACACATTTTTATAAAACTGAGTCAAATAT ATTGACTTTTTAAAAAGTTAACCAATCACATTAAGTGTGTTGGAGTCTTGGAGAGCATGTTTTAAGGAGTGTGTTGGCAC TCCTCTTTAAATAAATCTTATGTCCATATCAGTAGTTTTCTGCATATCATCAAGGTTGCTGTAATGAATACCAGCAGATG TTTATTGTTTCTAAATCTTAGGTTCTAAAGTATAAGTTCTGCTTTTTAGACAATTATTACTTTTATTGTGTAACTAAGAA AGATATGGAGATAAGGAACAAATTCAATCAATATATTGTTAGCCTGTATGAAATGAATAACTCACAAGTTTACCGAACAA AAGTTTAAGCTAAATGGTGTGGTTGTAGTGACAACTCCATCTTTTAATTATTGCAGAGATATCCAAGCAAGCAGTATTCT TTTAGATGATAAGTATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCATGCCCTCAAGATGGGGATGCACATCAAAGTAAAA TCACTCGGTTGCTGCGGTTGCCTCAGTAAGTACACCACTTACACCTGCATTTGATGAAACTCTTGAAAATGATGTTTGAT GGGCATTTAACAATTTATCATGCATTAACATATGATCAAATTGTGCTTCCTTTAGGCTTATCCTTTAAACTATTAATTGA TAAAGGCTAATGTTTTGATTGATGTGGTCTATTGCTTTTAGTGTTATTTATGGTTATAACATCCTTTTGCTGCTTTTTAA TAAGTGAAATGCTAGCAATACACTCTTCAACACACTTCATGTGATTGATTTATTTTTTAAAAAGTCAACACAATTTTGAT AAGTGAGAGAAATATGTTGACTATTTTGAGAATAGACTAATCATAGGAAGTGTGTGAGAGAATGTTCAATAGTGTGTTGC TACCATTCCTCTTCTAATAATAGAAACCACTTACTTGGTTTTCCTAATTCACCGCATAAAATAAATTTAACTAACTTATT TGGACCAAATTAATGCATTATTCTGAATAGGTTTATTTTACCTAGAATCTACCTTAGTGTATAATGTTAGCATGTTTTCA AAATCTGCATCTGACTGTAACATGTTAGTTTCCTTGATTTTTGCTCTTCAAGAATTCTTGTTCTGAGCCCTGTGTACTGG GGGCTAGTTAGTACTGTTGGTTTGGATTATCAAAAGCTGATTCCTTAAAACCTTTGTGGTCCTTGCAAAGTTATTCTCAG TAAAACCATGAAATCTGTTCAAATTTCTGCATCTCGGTGTCTTGTGTCTTACTTACCCCGGCAAAGATGATACTTTTCTT AATACCATGTAGCAGTTTACTATAGTAGTTTTCGTTTCCTTTTCATTTTCTTCCTCTATTGCTTTGTGGTTCATTTGCAT TAATTTATATTGATGTGTGCATATCATCTTATTTGCAAATGCGTATTATTACTCATAAAAATGTATATCTAATATCTTAT TTCTCATGTTAATATGCAGGCCCTCTGAACAAGCCACAACTGGTAAGTAGAAAATCATGAATATTTTTTGGCACAGATTT GTAGTTAGTTCTATGTCTTGACTCTTGACTTTACCTCTTATTATTTTCTTTCTTACTTGACACTTGTTGTTATGATTTGT TTCGGTACATGTTATATTTTAATATCATTTGAAGTTGTGATTGTGTTGATACTTGAGTGAATAGAAGAGTTGATTTTTTT CTATGAATTTTTGACAAAGTTTGTGTACTTGAAACCAGGTACATCAACATCAGTTTGTGCCTATGACGTGTATTGCTTTG GGAAAGTGTTACTTGAACTGGTGACCGGCAAGCTAGGAATTAGTGCCTCCAGTGTTGCTGAAGAAAAACAATGGTTGGAT CAGGTGCTACCTCACATTCATATTTATGACAAGGAGCTCTTGACAAAAATAGTGGATCCGTCTCTGATGGTGGATGATGA TCTCTTAGAGGAAGTGTGGGCAATGGCGATTGTTGCCAAGTCTTGCCTAAATCCCAAATCTTCAAGAAGACCCCCTATGA AATATGTTCTCAGGGCTTTGGAAAACCCTCTCAGAGTTGTGAGGGAAGAAAGTTTCAGCTCATCGCGGCTCAGAACAACC TCTTCTAGAAGCTCTTGGAATGCTGCATTGTTTGGTAGTTGGCGCCATAGCTCATCGGATGTGACAGTGATTCCACCAGC CTCTGGTACACGAGTAGAAGGAGGAAGCAGTTTAAAGCGTTCCGGTACTACCGGCTCGCAGGGTAGCTTCCCGAACACTG GAGGTGACGTGTCATCACCTCGCGGGCGGCACTCGAGGGAGATATTCCCAGAACCACCTGGAGCTGATGATGTTGAGAGG CAGGAGCTGGAGTAACTGAAGTAAACATTGTTCAGTAACATGTTACAGCAGGATTTCCATTCCCATTGCTGTTTGCTAAT ACCACATGCTCTTTAGTACATGTTTGGAAATCTTCTTACAAATAAACTTCAAGGTAAAATCAACTAAGGGGAGAAGCTTA TGTGAGTAGCTTCAAGGTGTCAGAATTAATTCTGAGGAAAAAGAAGTTGATCCAAACATGCTATTATTTGTTTTGGGCAT TGCTTGTGTATTGGAAGTGGAAGGTGCATAGTGTACATTTCTGTGGTCAAAGTTGCATTCAGATTTCTTGAACTTGTCCC TATTCAAAGGATACTTGTATTTCTTTATAAGTGAGTTTTGGACACACAAACTTGGGTGTATTGACAGATATAGAGAGCCA GAAGGCAGAGTGCTATAGTAGATTAGAACACTTCGGCTGCTTGTTAGAAACAAACAAGCCACAAATTTTTCCTCTTGTAA TTGATTTTTTATTTGATTAACTCCATTGTCAGACTCTAGAGTCTTGTCTTGGAATGTAAATTTGGATGATCCTATTTGTT GTTATTCTGGAAAAAAGGGACAGCATAAAGAAATGTTATACAGATTCTTTTGGCTCTGAATCAATTTGTTGGCTTATTGA ATTAAGAGCAGTGACCAAACTTTGTTGTGAATTCAGTCATGTGAGTATGCAATCAGTTATTCTGCTCTTTCCCC 

CDS sequence (LotjaGi3g1v0508400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGAATCTGCTAGGCATGGTGTGGTTTGGACTCTTGTTCTTGTTGCTGTTTAACTTTGAGTTCACATTGGAGCAGGT TGTTGTTGAGCCACTGAGTTCAACCGCGGAGCGAGCTGCGCTGCTCCAGCTTCGATCCTCTTTGGGCTTGAGGAGCAAGG AATGGCCAATAAAGGGTGACCCTTGTTTTATCTGGAGTGGTGTGAGTTGCCAGAATGGTAGTGTTGTTGGCATCAACATC TCTGGCTTTAGAAGAACCAGGCTTGGGAAGCAAAACCCAAAATTTTCTGTGGAAGCCTTAGCCAATCTCACCCTCTTGGA GTTTTTCAATGCCTCCAATTTTCTTCTCCCTGGTGCTATCCCTGATTGGTTTGGTCAGGGGCTACCTTCACTTACAGTGC TAGATCTTCGTTCAAGTTCAATCAATGGTGCTATTCCTTCAAGTTTTGGGAATTTAACAAGCCTCACTAGGCTCTATCTT TCTGATAACAATCTTACTGGGGTGCTTCCTGTTAGTCTTGGTCAACTCTTAGCACTTTCAGTGCTTAATCTTTCCAGAAA TGCTCTTAGTGGGTCCCTGCCATCATCAATTGTCTCTCTTGTGAACCTTTCTTCCCTTGATATTTCTGATAATTATTTAT CCGGGTCCATTCCCACTACCATTGGGGCACTCTCCAAGTTGCAATACTTGAATCTTTCCAATAATGGCCTAACTTCTTCT GTACCTGCAGAATTGGTCAACCTTAGTGGCTTGGTTGACCTTGATCTTAGTGAGAATTCCTTCTCTGGTGCTTTGCCAGA ACAGTTGTGGTCTCTGCCGAGATTGAGCTTCCTGGATGTCTCGAGCAATAACTTCACCGGTCCACTTCCTAATTCTAGTT CAATTTTTAATTCTACTGCTAGGGAGCTCAATATTTCTCATAATATGTTTTATGGAAGCCTCAGTCCTCTGCTTAGAAGG TTCAGTTCCATTGATGTGTCAAACAATTATTTCGAGGGAAGGGTTCTAGACTTCAAGATTGATGTATATCTAGATAGCAA TTGCCTCCAAAATGCAACTTATCAGAGGACACCAGTGGAATGTGCATCATTTTATGCTGACAGGGGCCTAACATTTGATA ATTTCGGACGACCAAATTCATCAGGAGCTCCAGAAGCAAAAGGCTCTGGGAAGAGCAATAAAAACAAGATAATCTTGGCA GCAGTGTTGGGCGGGGTGGGCTTGATTGCAGTATTGTTGTTACTAGTACTGCTGCTTCTATGCATTCGCAGGAGAAGTAA TACAAATCAAAGGGGAAATGGTGTCGGCCCCGCTCCTCCTGGTAGCAGTCCTCCACATCCTGGTGTACCAATCAACTACT CAAATGTTGGAGACTCATTTACATATCATCAGTTGCTCCAGGCCACAGGTGAATTCAAGGATGAAAATCTTATCAAACAT GGGCATACTGGGGATCTCTTCAATGGTGTTTTGGAAAATGGGATTCATGTAGTTATCAAAAGGATTGACATTCGTTCGAC TAAAAAGGATGATGACTTGTTGGAATTGGATTTTTTCAATAAGGTTTCTCATCCAAGATTTGTTCCCCTGTTGGGTCATT ACTTAGAAAATGAGAATGAGAAGTTCCTGGTTTACAAACATATGCCAAATATGGACTTGTCAAATAGCCTGTACTACAAA AAAACGCAATCTGAAGATGATACTTTGAAGTCATTGGACTGGATAACAAGGTTGAAAATTGCCATTGGAGCAGCAGAGGC CCTATCTTATCTGCACCATGAATGTAATCCACCCATTGTTCACAGAGATATCCAAGCAAGCAGTATTCTTTTAGATGATA AGTATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCATGCCCTCAAGATGGGGATGCACATCAAAGTAAAATCACTCGGTTG CTGCGGTTGCCTCAGCCCTCTGAACAAGCCACAACTGGTACATCAACATCAGTTTGTGCCTATGACGTGTATTGCTTTGG GAAAGTGTTACTTGAACTGGTGACCGGCAAGCTAGGAATTAGTGCCTCCAGTGTTGCTGAAGAAAAACAATGGTTGGATC AGGTGCTACCTCACATTCATATTTATGACAAGGAGCTCTTGACAAAAATAGTGGATCCGTCTCTGATGGTGGATGATGAT CTCTTAGAGGAAGTGTGGGCAATGGCGATTGTTGCCAAGTCTTGCCTAAATCCCAAATCTTCAAGAAGACCCCCTATGAA ATATGTTCTCAGGGCTTTGGAAAACCCTCTCAGAGTTGTGAGGGAAGAAAGTTTCAGCTCATCGCGGCTCAGAACAACCT CTTCTAGAAGCTCTTGGAATGCTGCATTGTTTGGTAGTTGGCGCCATAGCTCATCGGATGTGACAGTGATTCCACCAGCC TCTGGTACACGAGTAGAAGGAGGAAGCAGTTTAAAGCGTTCCGGTACTACCGGCTCGCAGGGTAGCTTCCCGAACACTGG AGGTGACGTGTCATCACCTCGCGGGCGGCACTCGAGGGAGATATTCCCAGAACCACCTGGAGCTGATGATGTTGAGAGGC AGGAGCTGGAGTAA 

Protein sequence (LotjaGi3g1v0508400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVNLLGMVWFGLLFLLLFNFEFTLEQVVVEPLSSTAERAALLQLRSSLGLRSKEWPIKGDPCFIWSGVSCQNGSVVGINI SGFRRTRLGKQNPKFSVEALANLTLLEFFNASNFLLPGAIPDWFGQGLPSLTVLDLRSSSINGAIPSSFGNLTSLTRLYL SDNNLTGVLPVSLGQLLALSVLNLSRNALSGSLPSSIVSLVNLSSLDISDNYLSGSIPTTIGALSKLQYLNLSNNGLTSS VPAELVNLSGLVDLDLSENSFSGALPEQLWSLPRLSFLDVSSNNFTGPLPNSSSIFNSTARELNISHNMFYGSLSPLLRR FSSIDVSNNYFEGRVLDFKIDVYLDSNCLQNATYQRTPVECASFYADRGLTFDNFGRPNSSGAPEAKGSGKSNKNKIILA AVLGGVGLIAVLLLLVLLLLCIRRRSNTNQRGNGVGPAPPGSSPPHPGVPINYSNVGDSFTYHQLLQATGEFKDENLIKH GHTGDLFNGVLENGIHVVIKRIDIRSTKKDDDLLELDFFNKVSHPRFVPLLGHYLENENEKFLVYKHMPNMDLSNSLYYK KTQSEDDTLKSLDWITRLKIAIGAAEALSYLHHECNPPIVHRDIQASSILLDDKYEVRLGSLSEACPQDGDAHQSKITRL LRLPQPSEQATTGTSTSVCAYDVYCFGKVLLELVTGKLGISASSVAEEKQWLDQVLPHIHIYDKELLTKIVDPSLMVDDD LLEEVWAMAIVAKSCLNPKSSRRPPMKYVLRALENPLRVVREESFSSSRLRTTSSRSSWNAALFGSWRHSSSDVTVIPPA SGTRVEGGSSLKRSGTTGSQGSFPNTGGDVSSPRGRHSREIFPEPPGADDVERQELE 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK 1 25 25 -
Phobius 1 3 3 -
Phobius 1 19 19 -
TMHMM 2 24 23 -
Phobius 4 15 12 -
Phobius 16 19 4 -
Phobius 20 396 377 -
PANTHER 29 266 238 0.0
PANTHER 29 266 238 0.0
Gene3D 31 196 166 7.8E-34
SUPERFAMILY 60 332 273 1.79E-50
SMART 128 151 24 140.0
Pfam 129 189 61 5.7E-11
SMART 152 175 24 1.8
SMART 176 200 25 62.0
Gene3D 197 360 164 6.0E-36
Pfam 202 260 59 4.1E-9
SMART 224 247 24 20.0
SMART 248 272 25 47.0
PANTHER 255 787 533 0.0
PANTHER 255 787 533 0.0
TMHMM 397 419 23 -
Phobius 397 422 26 -
Phobius 423 857 435 -
MobiDBLite 430 450 21 -
SUPERFAMILY 447 753 307 2.91E-40
Gene3D 450 547 98 3.3E-17
ProSiteProfiles 472 758 287 20.98
Pfam 476 750 275 4.9E-17
Gene3D 548 772 225 2.5E-31
MobiDBLite 795 857 63 -
MobiDBLite 807 832 26 -
MobiDBLite 833 857 25 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0508400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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