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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0270800 |
| Transcript ID | LotjaGi4g1v0270800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT5G24080.2 Protein kinase superfamily protein; Swiss-Prot: sp|A2XQD3|LERK2_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2; TrEMBL-Plants: tr|G7JCZ3|G7JCZ3_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi4g1v0270800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:63665535..63668567) extracted from Lotus japonicus Gifu genome v1.2.
TGTTAAGTTGTTATGTACACATCTGTGGAAATTCAGAATCTAGGGAGACTTGAGGCAATGCATGCATAAGAGTCAAGTCA ATTGGAGAATAATTGAGTGGTCTCCACAATGAAGTTTGGTCGTCCCTAGCTATCTTTCTGCTTTGCTTTGGCTTGTGATC GATCAAGTTGATATGTTAGAATTGTCATTTTTTTCTTGGTGACACCAGAAAAGTAATTAATTTCTAAATCCCATGGCTTC GACCCCTGTTCTGTTCTTACTGTTGTTAACGCTCTTCACAACAGAAGCCACAGCTGAAAGAAGAACCTCTACCAATAGCA CAATCCATCTTATCAATAGAACCATCCCTCTGTGGTCTTCGCTCTCTCCTGAAGGAAAACAAAATTCATGGGCATCAAGT TCCGGCCGGTTTGCTTTTGGCTTTTACCCCAAAGGTAATGGTTTTGCAGTTGGAATATGGCTGTTTAGTTCACCTAACAT CACTGTTGTCTGGACTGCTTTTCGCGATACTCCACCCTTCTCCTCTAACTCCTCACTGAGTTTGACTGATAGTGGCCTGG TTCTTCGAACTGGGGAGCAACAGCAGCTTCAAATTGCAAGTCCAGATCCGAATAATCCATATTACAGAGGGAATCAATTT CAACTTACAGTTGCAGTAGCTTCTGCTTCAATGCTTGATTCTGGCAACTTTGTGCTCTATGATAAGAACTTACATGTTAT CTGGGAAAGCTTTGCTTACCTAACTGACACCATGTTAGGAGGTCAGAACTTCAGTTCTGGTCTCCTGGTCTCTAGTCTGT CCAAATCAGATCGTTCAAGAGGACGTTTCTATCTCAGAGTGCAATCCGATTTAAGTATTGTTGCTATTGTTGCTTACCCT TTTAACAGCCCAGGACAACTGATAGATTCTTACTGGGCCTATAGGGAAGCCAAACAGCTCATTCTTAATGTTGAAGGTGT TCTTTGCTCACATGACAACCTTGTTGGTTCGTGTTTGTACGATAAGCCTACAAACAAGTCACGGAACACAACTTCAATCT ACCGCGCAACACTGGATGTAGATGGGAACTTGAGATTGTATGAGCACCGATTTGAAGGCAATAGTACAAGCTCACATGAG GAAAGTACGCTGTGGCAAGCATTGAATGATACATGTGAAGTCAAGGGGGTTTGTGGGGCGAACAGTTATTGCTCGAGCAT GAACGGTAATGCTGTGTGTCACTGCTATCCGGGTTTTGTCCCTTCCAATAGCAGTGATAACATGCCTCTGGACTGCAAAC AGACCTATATCAAAGATGATTGTGAAAGCAGTAAAAACCCAATGGTGTTGTATCGTGTTATTCAATGGGAGAATATCTCT TGGGGTGATACAGAGTATTCGATTATACCAATGAAGAAGAAAGCTTGTGAGAAGTCTTGCCAGGAAGACTGTGCTTGCGG GGGAGCAATGTATTATTCGAATGGCAACTGCAAGAAATATAACCTTCCCCTTATATATGGCAAAAGGTTTCAGGATACGT CAAGAGTGGCACTTTTAAAGGTGCCTTCAGGAAATGTCACTAGGCCAACTCCAACTTCAACTTCAAACATCACCTACGTG CCTAATGGCGTTGTTGATAACAAGAGAAGTCTGATATTGACTCTAGCCCTTACTCTCGGATGCATTTCGTTGTTCAGTTT GGTCTTTACAGTCTCCATTTTCTACACTTACAGGCGTCGAGTATATAGGCATACAATATTGTCTGCAAATGAAGATCTGG GATTTACTGAAGAGTGTTCTTTGCGTTCATTTTCTTATAATGAACTTGTGAAATCAACTGGTGGGTTCGCAGAGGAGATA GGCAGAGGATCATTTGGAGCTGTTTATAAAGGCATGATGGGTGGCAGTAGTAATAGAAGGATTGCGGTCAAAAGACTGGA GAGAGTTGCTGATGAAGGGGAGAGGGAATTCCGAGCTGAAATTACTGCTATAGCTCGAACACATCATAGGAATTTGGTTA AGCTTGTTGGTTTTTGTATAGAAGGATCTAAGAAGCTGCTTGTTTACGAATATGTCAGCAACGGGTCTCTTGCAAATCTG CTCTTCAATGATAAGATGCAGGGGATGTCATGGAAAGAGAGGATGAAAATCGCATTGGATGTGGCTAGAGGAGTCCTGTA TCTACATGAAGAATGTGAAGTCCGCATTATCCATTGCAATATAAGCCCTCAGAATATACTCATGGATGAAGCATGGACTG CAAAGATCTCTGATTTTGGATTGGCAAGGCTATTAAAGCTGGACTATTCAACAACCAAAAAAAGGGATGAAGGGACAAGC AGGTACTTGGCACCTGAATGGCACAAGGACGCATCAGTATCAATAAAAGTTGACATTTACAGTTTTGGCATGGTACTATT GGAGATTATCTGCCGCAGAAGCGGTATAGAAATGAATGCTTCCTCAGCTGAGGAGATACTTCTTTCCAGGTGGGTATATC AATGCTTTGCAGCTGGGAAATTGAATTTGCTCCTTACACATGATGAAGATGTAGATTGGAAGATAATGGAAAGAATGGTG AAGGTGGGGTTGTGGTGTGTGCAAGACAACCCATCTCTTCGTCCTTCAGTGAAGAATGTCATATTGATGTTGGAAGGATT GAAAGATATTCCAATTCCACCTTCTCCGATCCGCTTGGTTGAGTAGTCACCTTACTTTTCTCTAATCAATTCTGAAATCA GAAGCCACCCACATAAGTTTCTTCTTAAAATTGATTCTAGCTCCATAATCAATTGTATAAGAATTTCCAAATAAATACTA GGACTTGGGACATTGTGTTACTGGTATGATTTGTCTTTACATATATAGTTAGTAAATCTGTAAATGTACTGCTGTGCTGT GGTTTCATTTTTATCTATGAATTGTTGTTCAGGTTGTTCTTGTGGGCTTCTGGTCAATTATATCAAAAGCTACCTTCCTT GCTTGCCGTTCATGGAATGCAAAATTTGTAATAATAAACTCAATATTCTAGTGAAAAAAAAAACTCAATATTC
CDS sequence (LotjaGi4g1v0270800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCGACCCCTGTTCTGTTCTTACTGTTGTTAACGCTCTTCACAACAGAAGCCACAGCTGAAAGAAGAACCTCTAC CAATAGCACAATCCATCTTATCAATAGAACCATCCCTCTGTGGTCTTCGCTCTCTCCTGAAGGAAAACAAAATTCATGGG CATCAAGTTCCGGCCGGTTTGCTTTTGGCTTTTACCCCAAAGGTAATGGTTTTGCAGTTGGAATATGGCTGTTTAGTTCA CCTAACATCACTGTTGTCTGGACTGCTTTTCGCGATACTCCACCCTTCTCCTCTAACTCCTCACTGAGTTTGACTGATAG TGGCCTGGTTCTTCGAACTGGGGAGCAACAGCAGCTTCAAATTGCAAGTCCAGATCCGAATAATCCATATTACAGAGGGA ATCAATTTCAACTTACAGTTGCAGTAGCTTCTGCTTCAATGCTTGATTCTGGCAACTTTGTGCTCTATGATAAGAACTTA CATGTTATCTGGGAAAGCTTTGCTTACCTAACTGACACCATGTTAGGAGGTCAGAACTTCAGTTCTGGTCTCCTGGTCTC TAGTCTGTCCAAATCAGATCGTTCAAGAGGACGTTTCTATCTCAGAGTGCAATCCGATTTAAGTATTGTTGCTATTGTTG CTTACCCTTTTAACAGCCCAGGACAACTGATAGATTCTTACTGGGCCTATAGGGAAGCCAAACAGCTCATTCTTAATGTT GAAGGTGTTCTTTGCTCACATGACAACCTTGTTGGTTCGTGTTTGTACGATAAGCCTACAAACAAGTCACGGAACACAAC TTCAATCTACCGCGCAACACTGGATGTAGATGGGAACTTGAGATTGTATGAGCACCGATTTGAAGGCAATAGTACAAGCT CACATGAGGAAAGTACGCTGTGGCAAGCATTGAATGATACATGTGAAGTCAAGGGGGTTTGTGGGGCGAACAGTTATTGC TCGAGCATGAACGGTAATGCTGTGTGTCACTGCTATCCGGGTTTTGTCCCTTCCAATAGCAGTGATAACATGCCTCTGGA CTGCAAACAGACCTATATCAAAGATGATTGTGAAAGCAGTAAAAACCCAATGGTGTTGTATCGTGTTATTCAATGGGAGA ATATCTCTTGGGGTGATACAGAGTATTCGATTATACCAATGAAGAAGAAAGCTTGTGAGAAGTCTTGCCAGGAAGACTGT GCTTGCGGGGGAGCAATGTATTATTCGAATGGCAACTGCAAGAAATATAACCTTCCCCTTATATATGGCAAAAGGTTTCA GGATACGTCAAGAGTGGCACTTTTAAAGGTGCCTTCAGGAAATGTCACTAGGCCAACTCCAACTTCAACTTCAAACATCA CCTACGTGCCTAATGGCGTTGTTGATAACAAGAGAAGTCTGATATTGACTCTAGCCCTTACTCTCGGATGCATTTCGTTG TTCAGTTTGGTCTTTACAGTCTCCATTTTCTACACTTACAGGCGTCGAGTATATAGGCATACAATATTGTCTGCAAATGA AGATCTGGGATTTACTGAAGAGTGTTCTTTGCGTTCATTTTCTTATAATGAACTTGTGAAATCAACTGGTGGGTTCGCAG AGGAGATAGGCAGAGGATCATTTGGAGCTGTTTATAAAGGCATGATGGGTGGCAGTAGTAATAGAAGGATTGCGGTCAAA AGACTGGAGAGAGTTGCTGATGAAGGGGAGAGGGAATTCCGAGCTGAAATTACTGCTATAGCTCGAACACATCATAGGAA TTTGGTTAAGCTTGTTGGTTTTTGTATAGAAGGATCTAAGAAGCTGCTTGTTTACGAATATGTCAGCAACGGGTCTCTTG CAAATCTGCTCTTCAATGATAAGATGCAGGGGATGTCATGGAAAGAGAGGATGAAAATCGCATTGGATGTGGCTAGAGGA GTCCTGTATCTACATGAAGAATGTGAAGTCCGCATTATCCATTGCAATATAAGCCCTCAGAATATACTCATGGATGAAGC ATGGACTGCAAAGATCTCTGATTTTGGATTGGCAAGGCTATTAAAGCTGGACTATTCAACAACCAAAAAAAGGGATGAAG GGACAAGCAGGTACTTGGCACCTGAATGGCACAAGGACGCATCAGTATCAATAAAAGTTGACATTTACAGTTTTGGCATG GTACTATTGGAGATTATCTGCCGCAGAAGCGGTATAGAAATGAATGCTTCCTCAGCTGAGGAGATACTTCTTTCCAGGTG GGTATATCAATGCTTTGCAGCTGGGAAATTGAATTTGCTCCTTACACATGATGAAGATGTAGATTGGAAGATAATGGAAA GAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACAACCCATCTCTTCGTCCTTCAGTGAAGAATGTCATATTGATGTTG GAAGGATTGAAAGATATTCCAATTCCACCTTCTCCGATCCGCTTGGTTGAGTAG
Protein sequence (LotjaGi4g1v0270800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTPVLFLLLLTLFTTEATAERRTSTNSTIHLINRTIPLWSSLSPEGKQNSWASSSGRFAFGFYPKGNGFAVGIWLFSS PNITVVWTAFRDTPPFSSNSSLSLTDSGLVLRTGEQQQLQIASPDPNNPYYRGNQFQLTVAVASASMLDSGNFVLYDKNL HVIWESFAYLTDTMLGGQNFSSGLLVSSLSKSDRSRGRFYLRVQSDLSIVAIVAYPFNSPGQLIDSYWAYREAKQLILNV EGVLCSHDNLVGSCLYDKPTNKSRNTTSIYRATLDVDGNLRLYEHRFEGNSTSSHEESTLWQALNDTCEVKGVCGANSYC SSMNGNAVCHCYPGFVPSNSSDNMPLDCKQTYIKDDCESSKNPMVLYRVIQWENISWGDTEYSIIPMKKKACEKSCQEDC ACGGAMYYSNGNCKKYNLPLIYGKRFQDTSRVALLKVPSGNVTRPTPTSTSNITYVPNGVVDNKRSLILTLALTLGCISL FSLVFTVSIFYTYRRRVYRHTILSANEDLGFTEECSLRSFSYNELVKSTGGFAEEIGRGSFGAVYKGMMGGSSNRRIAVK RLERVADEGEREFRAEITAIARTHHRNLVKLVGFCIEGSKKLLVYEYVSNGSLANLLFNDKMQGMSWKERMKIALDVARG VLYLHEECEVRIIHCNISPQNILMDEAWTAKISDFGLARLLKLDYSTTKKRDEGTSRYLAPEWHKDASVSIKVDIYSFGM VLLEIICRRSGIEMNASSAEEILLSRWVYQCFAAGKLNLLLTHDEDVDWKIMERMVKVGLWCVQDNPSLRPSVKNVILML EGLKDIPIPPSPIRLVE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PIRSF | 2 | 817 | 816 | 3.2E-183 | ||
| Phobius | 6 | 16 | 11 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 466 | 445 | - | – | |
| Gene3D | 36 | 168 | 133 | 2.0E-8 | ||
| ProSiteProfiles | 37 | 168 | 132 | 9.883 | ||
| SMART | 44 | 170 | 127 | 0.0033 | ||
| SUPERFAMILY | 72 | 212 | 141 | 1.18E-13 | ||
| Pfam | 84 | 180 | 97 | 1.6E-11 | ||
| Pfam | 265 | 338 | 74 | 6.4E-7 | ||
| PANTHER | 316 | 812 | 497 | 3.2E-100 | – | |
| PANTHER | 316 | 812 | 497 | 3.2E-100 | – | |
| Phobius | 467 | 493 | 27 | - | – | |
| TMHMM | 469 | 491 | 23 | - | – | |
| Phobius | 494 | 817 | 324 | - | – | |
| Gene3D | 495 | 607 | 113 | 7.7E-30 | – | |
| SUPERFAMILY | 514 | 801 | 288 | 3.05E-71 | ||
| ProSiteProfiles | 530 | 803 | 274 | 36.047 | ||
| Pfam | 533 | 797 | 265 | 4.0E-45 | ||
| ProSitePatterns | 536 | 560 | 25 | - | ||
| Gene3D | 608 | 806 | 199 | 2.4E-51 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi4g1v0270800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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