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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0421000 |
| Transcript ID | LotjaGi4g1v0421000.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dual specificity phosphatase family protein; TAIR: AT5G23720.1 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|A0A072TU75|A0A072TU75_MEDTR Dual specificity phosphatase family protein; Found in the gene: LotjaGi4g1v0421000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79614240..79620851) extracted from Lotus japonicus Gifu genome v1.2.
CTCAATCTTACATATTCCCAAACTCACCTTTTTATTTTTCTCTTTCACCGCCTAAACCCAACTTCATCTTCATCAAGTTT TTCTAGTTCTCCTTCTTCTACTACCATACTCTACTCTATACTGTTTGTTAGCATACATACAACCTTGTATTCTGCTAAGC AGCATTGGACAGTTGAACTAACTTGCTGTTTTGTGTCTTGTGTTTCATACATAACCTTCCCAACTTTCTCTCTCCCCTTA AAAAAAAAGGAGAAAACTGTGCCTGTTATTCCGTGCGTTTCTCCCTTGCAATTTGACTCTGCATCCCCTCAAAAACCATA TATTTGTATACCATACACCAACACCATATGGCAAAAGAGCAAAAGCAGGTTCACACCCTTTTTCTTTCTTATACAAAACA TGTATAATTAGCATAATTATAAAAAGAAAAAGAAAAAAACTAGTAGTAAAACAACAACTACAATGCTTGTGATCATGATC ATGATTCTAATTTAGATCCTCACACAATTGCATTCTTTATTGTATTGTGATCGTGATCTGCACTCACTGGTAGCTGTAGA TCCATCATTGGATCTGGTTGGTTGCTCTCTCTTTTGCATTTAACATTCAACATCTTTGCATGTGGGAGTTGGCATTTCAG GGCAAAGGCCAAGACAGGGAATTGGAACTGGAAAGTGACGAGGGTGAGGCTGAGATTGAGGTTCCATTGCCTCTCACAGC AACTTCTCGGGTCTGTTAACTTCTTTCTTTTTTTATACATTTCCAATTTATATGGCATTTTGAAACTGCAAGTGCAGAGT TAGAAGCTTTTTGGCGTTGTTTGGAGAATGGGGATTGATGATAGAAGTTCTAAGTTGGAAGCTTTTTGACATTGTTTGGG GAATTTGGGAACTGGGTAATGCAGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAGGTTCACGCAATG GCTCCAATTGGTTCGTAGACGCACTGCCAAATACCGTTCCTCTGGCTTCCCTCGCCGCCTTTCTATCACCATGTCTTCTA GTTCTTGGTTAGTTACAACTACTTGCCATTCTATTTCATTTCTTGCAACTGTCATTGGTTCTGTAAATTCTAGTGTGCAA GACATTGTTGGATGCTATAGGTTTGAAGTTTCTTCCTTGGGGAACCAATAGGGCATGTGAAGTGAGTGTGTAACTGAACA TGTTTGGATCACCTAGAAACTGGTCACAAAAGTTTCTCTCCAGAATTGAGAGTGTCTTTGGTTTCCCGTGCGGAAACCAA TCAATTCTGGTAGGGTAAAATCAATTATGGATGAGATGAATGTTGATGTTCGGGAGTCATTTTGGAGAGTTGATTTCAAA CTCAAAATCAATTCTGGTAGAAACTAGAGACAGTAGCTTTTTGCGTTGAGAATAATCAATAATGATATTTTACAACTAAA CTTCACAACGCTACCCAATAAAAATCACTTTTCCATAATATATCCAAACATAAAGCACTTCACTTTCAGCTCACTTTTAC TATAATCAATTTTTCCAATCAATTGTGACGAAACGTCGATCTAAATACACACTAATTCTGACTTTTGAATCAATTGTAGA AGGATTTACAAACAATCAATAAGTATGTAAGGCGTTTGTTCAATGCCTTGGCAATTTTTGTCATGGCTTTGAAGTGAGCC TTGTGTCTGTTGCTAATGCTTGTAGTTTGTGCTCAGCATCAGAGAATCGATTGAGGACTTTAAAGGGGACCTACACCCTG ATCAAACAGAGATTAGCCTGTGGGAGAGGCTCGGGAAAGCTGCCATGTTGGATATTGAATCAAGCTCCTTTTCTTGGGAC ACGCTCTCGTCGCTGCACCACACCGAACACAGCAGTAGCAATGAACATTCTGAGGATGAAATGTGCAAGCCTCTTGAGGT TCATCATTTTCTATACTCAAATACTCACCATGTACAAGCATTAATATAATACTTTTTTGTGTAATAAAAGCCTTTACAGT AATCATTTCATGTGTTGTGTTTTCTTTGTCGTACTAAATTATAGAAAAGTAAACATGCATCAATTGTGTATTATTTTCCA AAATTTCTGTCTCAGTTTCCCCTCAGTTTTGTGCACATAGGTAACTGTAAATTCTGGAGGGGTTGTCTTCTTTGCCTTTT TCAATTGCCTTGGGAGTTCTGACACTTTTCCAAAAGAAGCAGCAGCTGTTATAAAGATAGCATCATCAAGAATGGCAACA CAGTCTGAACGCCTTGGTTATGAATTCGCCAAGTGGTTGGGAGTCCGAACTCCACAGGTTGTTCCCTTTGGTTTTGTAAT ATAAGTACCGCTTCTTCAAGCTTAGGCTATCCGGCTGTAATTTTACGCTACTACCATATTCATTCTCTTTTGTTATATGG AGTGTGCAGGCTAGAGTCATTCACAATACTAGTCCAGAATGGCAACAAATAAAGGAAGCTGCAGAAAAGGCTAGAGAAGC AGCAAATTCTGAGGGTGATGAAATTGGTGAAGTGACGTGTTTTGAACTTTTAGAAGCACTTGAGCTTAGCCGATGTCTCT TTTTTATGAAGTATGATCCAAATCTTATTTTAATGTGATCAGGCTCATAACATGTCAGCACAGAATACCTTTGCTTGCTT CGCCATATCCAATAACCACCTCTTAAATGAACAAGACATTGCTACTTTGTTGTCTTTTTTTTCATTGAATTTCAATAAGC TCAGTTCAGAACTGTTTGACTGAGCACTGACAAGCCTGAAGTAAATTTTTGGAATATGTTTTTTCTTTCTCATATATGGA AGTTCCATTTCTTCATGTGACAAAGCAAGTGTCATTCTTGATACTTGTGTTTTGTATTTCTTTCCTTGGTCAGTTTCTGA AGCATGCTATGAGGAGTTTCTTGACATCGCTGTTCTCTACAAAATAAATTTTGATTGTTTGTTCTAAAGATTCCCTTTCT TCTTGCAGTTATGTACATGGTTCACCTTTACTTGACAACTCCAGTGCATTTGAGTCATGGGAATCTGCAGAAAGAACATC AGAAGCTCTTGGCAGGGTACTGATGCTGGACCTTGTCATCAGAAATGAAGACAGACTCCCTTGCCGGGTGCTTAGATGGC GTGGGAATTGTGCAAATTTGTTGTCGGCCGAAAAGATGATCTCAGCAAATACAGATACTCTAGGATCAGCTTTTGATTCT GCAATTAATCGATACAAACCGAAGTTGATTAAGGCACTTCAAAATGAAAGAAGGTCAACTTCAGTTGATAGCAGACTCAG CTCTCATGATTCTGGCTTGATATCACAAACCTCTGATCTTTCAGAGATCACAGAATCACCAAGATCCACTGACATAAGCC TTAGACGTCAAACATCAGAAGAATCACTGTCTTCTGCTGACCATAACATCGTAGCAATTGATTCCGGTGTTCCCCGGCGA CCCCCTGCGGGGAAACGCGCAAATGATCAGGTTAATTACCCTAAGTTGGTTGAGTTGCTGATGAATAGTTCTGGATATGC CTCTAACCTGTTATATGATATAACTGGAGGGAAATTAGGTTGTCCTCCATCAGAAGACATGGATACAACTGATGTACATA CAAGTGAAATGAGATCAGTAATCCGTGCATTCAGGACAGGCTTCCGTGATGCTCTTAGAGATCTGCAGGGATTCCATATA TTCCTACTCACTCTTCACCAAAGACTAGATACTTTATTACGATCATTTATGAACATTGTAAGCAAAATATCTGCGGGGGA ATCTGACAAAGACGATTTTTTGATTCCTGACTCACCTTCACTGGCTCCTGGTGGTTGTTTCTCCTCTCCAACAAGTAAGG AGAGGCTTGCTAATGATAACCATCAGGATTTTACTGACACAGAATCACATAAAACTGCTTGTAGGGCATCATCTTTGGGT AATAGAGACGGCTATGACTCTACTCCTATGTCAAGAGAAAATTGGCATGGAAAGTTCTCGAAAGGAAATGGGGAGCCACT TCGTAATCTGCGCCTGACAGCTAAGCTCCGCGACTTCAATAAATTTGCCAAGGTTGGTCTCATAGGTAATAAGACCTTGT TTTCTAGTCATATGATTTCGGTGCTGCTGGGGAGTAATCTGATTTCTTTTTTGGGTGCACTTTTTCCATTTTACATTATG GATATCATAAATAATCAGCCAATTACACATTTCTTTAATATGCAAATTAACATGACTTAATTGCATGTCTATGCACAAAA TTGACTGATGTGGACAATGCTCATGTTTCTGACCATGAGTTCTTTTTGTGTTCTTGAGTAAGAACATGTATTTTTCTGAA TCAATTTCCCCCAGTTTTATCCCGGTAATTGGCAAATAAGAATACTAGAGCAATGTTCATGACTTTTATACTGTCTCATG ACTTCCAGGTTTTTGATGCTGAATCTAGTAAGGAATTGGAACAGTGGAATGAAATGCTTAAAAATGACGCCGTCAAACTA TGCCAGGAGAACAATTTCAATTCAGGATTTTTCGAGGGTAGTGATAATAACAGTGCTGTTGATGCATATGAACTCAAGGT TATCTTTACTTTGATAGATTCAAAACTAAAGTATTTTAAACTCATTTTATTAATGAGGGATTTTTTATTTATGATGCATG TTCTTCTTAACTCTCAGGTCAGACTAGAGCACATCCTTGAGAGAATTGCATTGATATCCGAAGCTGCAAGTACAGAGAGA CCATCTGCTGTTACAAGTAGTCTGTTCATTGGTGGAGCACTGGCGGCAAGATCCGTATACACACTGCAATACTTGGGAAT CACGTATATTTTGTGTTTGTGTACCAATGAGATCGGACAATCTGAATCTCAATTTCCTGATCTATTCGAGTACAAAAATT TCTCAGTAAGTCATATTCACTTGTCTATTTTTCATTTTCATCTTGTTTAATGAGATTTAGATGATCTGAGAATCAGTTGA GCTCGTGCTTGATTAATGTCTCTGCTTTTCCTTGTTAAGTTGTTGCTTTCTCACTGTAATAAGGAATAACTTCTTGTGTT TAAGTTCTTAGGTGCATGTCCATGAATATTTTTTTATTTCCTTAGCTTGATAGTGTATTCTGATACAGCAATATGCTCTC TTGATTAAAAATGGGTTTGCTATTCAATATGACATGTTCTTCTGTGTTTCTATGATATCCTTTTCTAATTTTCTTTCAGG AATTTATTCATATTGGTTTTATTTACAATCCCATTTTAACAGGTGTGTGACAGTGAAGATTTTGACATCAACAACATATT TGAAGAAGCATGTGATTTTATAGATTATGTTGAACAAAAAGGCCAGAGAGTTTTAGTTCATTGCTTTGAAGGGAGAAGCA GAAGTGTTGCGTTGGTCCTTGCTTACTTAATGCTCAGGAAGTAAGTAAACATGAAAAATTTATAAAAATATTTAGCTATG CAGTCATCAATTAGATGATAAACAATCTAGTTATAATTCACCATCTAGCAATCATAAGTTCACGTTATATGATATTTAAA ATTGTTACTCCTAGAGATCCTCTTATGTCACAGGATCATGTCAAGTGAAACATTATGTGTATCTCTTTATGACAATGGAA GAATATGAGAAAGTTTCCACATAAGAGAATCCTGATCCGCTGGTCAGTGAGTGGCATCTTGGACTATTTTTGAACTGAAA ACTTTCATGGTGCAGGAAGTATACTTTATTAGAAGCATGGCAGGCTCTGAAACGAGTACACCGGCGAGCGCAGCCCAATG ATGGCTTTGCAAAGATCTTACAAGAATTGGATCAGAAACTACATGGGAAGGTTTCAATGGAGTGGCAGCAGAGGAAGCCA ACTATGAAAGTTTGTCCGGTCTGCGGAAAAAATGCTGGACTAAGCAGCAGCTCACTCAAGCTGCATCTGCAGAAAGCACA CAGAAAGCTGTCATCTGGGAGTGTAGATAGTGCCATGACAATGGAGATTCAGAAGGCATTAACAGCTTTGAAGATTAGCC GTGGCGGAAGTGTCAGCCCCACACAAAGATCTTCCCACTCCATAATAGATCAATAGAAACCAGAGACTCTACATTTTACT CAGGCGAATTAGATGCTGGGTGGGGTGAAAATTTTGGCAACATAAGTAGCTAATCCCCAAAGTGTGTTTTAAATTATACT TTTTAGCAAATAGCTTTTATTCTATTAAGTGTAGGTAGAATATAGGCTTGGAGTTTGTTCATTGGAAGTGTTGTTGTTCG TGTCATAAGTCATAACTCATAAGCAAGTATTTTCACATGCCAACAGAGTGGTCAGTTAGGGAATTATTATGATGATTTCA TACACTAAGAATCATGGAATATATATGTACTACATACTCTATATTGCAATCAAAAGCAAGCATTTGATCATATATTAAAG TGTTAATATATCTGGTTCGGTATGAAATTGAAAACTCAAATATAGTGAATATTAGTATCAAATATAGAGATAATAATCAA AGTGGAAACTCAAATATAGTGAATATTAGTATCAAATATAGAGATAATAATCAAAGTGAAAACTCACATTGCATCGCATT GTTTCCTTTCCAAATTATTTTATAATTATAATGTATCAAATCATATGTTGGA
CDS sequence (LotjaGi4g1v0421000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACACAGTCTGAACGCCTTGGTTATGAATTCGCCAAGTGGTTGGGAGTCCGAACTCCACAGGCTAGAGTCATTCA CAATACTAGTCCAGAATGGCAACAAATAAAGGAAGCTGCAGAAAAGGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAA TTGGTGAAGTGACGTGTTTTGAACTTTTAGAAGCACTTGAGCTTAGCCGATGTCTCTTTTTTATGAATTATGTACATGGT TCACCTTTACTTGACAACTCCAGTGCATTTGAGTCATGGGAATCTGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTACT GATGCTGGACCTTGTCATCAGAAATGAAGACAGACTCCCTTGCCGGGTGCTTAGATGGCGTGGGAATTGTGCAAATTTGT TGTCGGCCGAAAAGATGATCTCAGCAAATACAGATACTCTAGGATCAGCTTTTGATTCTGCAATTAATCGATACAAACCG AAGTTGATTAAGGCACTTCAAAATGAAAGAAGGTCAACTTCAGTTGATAGCAGACTCAGCTCTCATGATTCTGGCTTGAT ATCACAAACCTCTGATCTTTCAGAGATCACAGAATCACCAAGATCCACTGACATAAGCCTTAGACGTCAAACATCAGAAG AATCACTGTCTTCTGCTGACCATAACATCGTAGCAATTGATTCCGGTGTTCCCCGGCGACCCCCTGCGGGGAAACGCGCA AATGATCAGGTTAATTACCCTAAGTTGGTTGAGTTGCTGATGAATAGTTCTGGATATGCCTCTAACCTGTTATATGATAT AACTGGAGGGAAATTAGGTTGTCCTCCATCAGAAGACATGGATACAACTGATGTACATACAAGTGAAATGAGATCAGTAA TCCGTGCATTCAGGACAGGCTTCCGTGATGCTCTTAGAGATCTGCAGGGATTCCATATATTCCTACTCACTCTTCACCAA AGACTAGATACTTTATTACGATCATTTATGAACATTGTAAGCAAAATATCTGCGGGGGAATCTGACAAAGACGATTTTTT GATTCCTGACTCACCTTCACTGGCTCCTGGTGGTTGTTTCTCCTCTCCAACAAGTAAGGAGAGGCTTGCTAATGATAACC ATCAGGATTTTACTGACACAGAATCACATAAAACTGCTTGTAGGGCATCATCTTTGGGTAATAGAGACGGCTATGACTCT ACTCCTATGTCAAGAGAAAATTGGCATGGAAAGTTCTCGAAAGGAAATGGGGAGCCACTTCGTAATCTGCGCCTGACAGC TAAGCTCCGCGACTTCAATAAATTTGCCAAGGTTTTTGATGCTGAATCTAGTAAGGAATTGGAACAGTGGAATGAAATGC TTAAAAATGACGCCGTCAAACTATGCCAGGAGAACAATTTCAATTCAGGATTTTTCGAGGGTAGTGATAATAACAGTGCT GTTGATGCATATGAACTCAAGGTCAGACTAGAGCACATCCTTGAGAGAATTGCATTGATATCCGAAGCTGCAAGTACAGA GAGACCATCTGCTGTTACAAGTAGTCTGTTCATTGGTGGAGCACTGGCGGCAAGATCCGTATACACACTGCAATACTTGG GAATCACGTATATTTTGTGTTTGTGTACCAATGAGATCGGACAATCTGAATCTCAATTTCCTGATCTATTCGAGTACAAA AATTTCTCAGTGTGTGACAGTGAAGATTTTGACATCAACAACATATTTGAAGAAGCATGTGATTTTATAGATTATGTTGA ACAAAAAGGCCAGAGAGTTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGTGTTGCGTTGGTCCTTGCTTACTTAATGC TCAGGAAGAAGTATACTTTATTAGAAGCATGGCAGGCTCTGAAACGAGTACACCGGCGAGCGCAGCCCAATGATGGCTTT GCAAAGATCTTACAAGAATTGGATCAGAAACTACATGGGAAGGTTTCAATGGAGTGGCAGCAGAGGAAGCCAACTATGAA AGTTTGTCCGGTCTGCGGAAAAAATGCTGGACTAAGCAGCAGCTCACTCAAGCTGCATCTGCAGAAAGCACACAGAAAGC TGTCATCTGGGAGTGTAGATAGTGCCATGACAATGGAGATTCAGAAGGCATTAACAGCTTTGAAGATTAGCCGTGGCGGA AGTGTCAGCCCCACACAAAGATCTTCCCACTCCATAATAGATCAATAG
Protein sequence (LotjaGi4g1v0421000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATQSERLGYEFAKWLGVRTPQARVIHNTSPEWQQIKEAAEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMNYVHG SPLLDNSSAFESWESAERTSEALGRVLMLDLVIRNEDRLPCRVLRWRGNCANLLSAEKMISANTDTLGSAFDSAINRYKP KLIKALQNERRSTSVDSRLSSHDSGLISQTSDLSEITESPRSTDISLRRQTSEESLSSADHNIVAIDSGVPRRPPAGKRA NDQVNYPKLVELLMNSSGYASNLLYDITGGKLGCPPSEDMDTTDVHTSEMRSVIRAFRTGFRDALRDLQGFHIFLLTLHQ RLDTLLRSFMNIVSKISAGESDKDDFLIPDSPSLAPGGCFSSPTSKERLANDNHQDFTDTESHKTACRASSLGNRDGYDS TPMSRENWHGKFSKGNGEPLRNLRLTAKLRDFNKFAKVFDAESSKELEQWNEMLKNDAVKLCQENNFNSGFFEGSDNNSA VDAYELKVRLEHILERIALISEAASTERPSAVTSSLFIGGALAARSVYTLQYLGITYILCLCTNEIGQSESQFPDLFEYK NFSVCDSEDFDINNIFEEACDFIDYVEQKGQRVLVHCFEGRSRSVALVLAYLMLRKKYTLLEAWQALKRVHRRAQPNDGF AKILQELDQKLHGKVSMEWQQRKPTMKVCPVCGKNAGLSSSSLKLHLQKAHRKLSSGSVDSAMTMEIQKALTALKISRGG SVSPTQRSSHSIIDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 243 | 243 | 3.57E-47 | ||
| PANTHER | 1 | 735 | 735 | 0.0 | – | |
| PANTHER | 1 | 735 | 735 | 0.0 | ||
| Pfam | 3 | 229 | 227 | 9.0E-33 | ||
| Gene3D | 84 | 214 | 131 | 1.3E-5 | ||
| MobiDBLite | 173 | 216 | 44 | - | – | |
| MobiDBLite | 375 | 413 | 39 | - | – | |
| MobiDBLite | 384 | 401 | 18 | - | – | |
| Gene3D | 490 | 663 | 174 | 2.2E-40 | ||
| ProSiteProfiles | 508 | 652 | 145 | 32.069 | ||
| SUPERFAMILY | 508 | 653 | 146 | 8.38E-32 | ||
| SMART | 508 | 650 | 143 | 1.8E-24 | ||
| CDD | 509 | 646 | 138 | 2.59123E-48 | – | |
| Pfam | 524 | 649 | 126 | 2.3E-22 | ||
| ProSiteProfiles | 573 | 629 | 57 | 10.871 | ||
| Coils | 733 | 735 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphoprotein phosphatase activity | Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Protein tyrosine/serine/threonine phosphatase activity | Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate. | ||
| Biological process | Response to abscisic acid | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Biological process | Dephosphorylation | The process of removing one or more phosphoric (ester or anhydride) residues from a molecule. | ||
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. | ||
| Biological process | Cortical microtubule organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
Expression pattern of LotjaGi4g1v0421000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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