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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036940
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We have found 39 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.603s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0180100.2
n.a. Serine/threonine-protein kinase; TAIR: AT3G48190.2 Serine/Threonine-kinase ATM-like protein; Swiss-Prot: sp|Q9M3G7|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr|A0A0R0KG32|A0A0R0KG32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0180100 LjG1.1_chr1 34763786 34839512 +
2 domain predictions
1 GO term
LotjaGi1g1v0318700.1
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG9|K7KLG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76772668 76785107 +
2 domain predictions
1 GO term
LotjaGi1g1v0318700.3
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG9|K7KLG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76773262 76784049 +
2 domain predictions
1 GO term
LotjaGi1g1v0318700.4
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG8|K7KLG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76773262 76784049 +
2 domain predictions
1 GO term
LotjaGi1g1v0318700.6
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG8|K7KLG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76773262 76784744 +
2 domain predictions
1 GO term
LotjaGi1g1v0318700.8
n.a. Phosphatidylinositol 4-kinase; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG9|K7KLG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76776028 76784049 +
2 domain predictions
1 GO term
LotjaGi1g1v0334000.1
n.a. Dual specificity phosphatase family protein; TAIR: AT5G23720.1 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|A0A0S3RFM3|A0A0S3RFM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0334000 LjG1.1_chr1 79255119 79263545 -
2 domain predictions
1 GO term
LotjaGi1g1v0570200.1
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT1G49340.1 Phosphatidylinositol 3- and 4-kinase family protein; Swiss-Prot: sp|Q9SXA1|P4KA1_ARATH Phosphatidylinositol 4-kinase alpha 1; TrEMBL-Plants: tr|I1JSQ3|I1JSQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0570200 LjG1.1_chr1 110309598 110330597 -
2 domain predictions
1 GO term
LotjaGi1g1v0570200.2
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT1G49340.1 Phosphatidylinositol 3- and 4-kinase family protein; Swiss-Prot: sp|Q9SXA1|P4KA1_ARATH Phosphatidylinositol 4-kinase alpha 1; TrEMBL-Plants: tr|I1JSQ3|I1JSQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0570200 LjG1.1_chr1 110312717 110330358 -
2 domain predictions
1 GO term
LotjaGi2g1v0321200.1
n.a. Phosphatidylinositol 3-kinase; TAIR: AT1G60490.1 vacuolar protein sorting 34; Swiss-Prot: sp|P42347|PI3K1_SOYBN Phosphatidylinositol 3-kinase, root isoform; TrEMBL-Plants: tr|A0A151TLR0|A0A151TLR0_CAJCA Phosphatidylinositol 3-kinase, root isoform; Found in the gene: LotjaGi2g1v0321200 LjG1.1_chr2 79596761 79607136 -
2 domain predictions
1 GO term
LotjaGi2g1v0321200.2
n.a. Phosphatidylinositol 3-kinase; TAIR: AT1G60490.1 vacuolar protein sorting 34; Swiss-Prot: sp|P42347|PI3K1_SOYBN Phosphatidylinositol 3-kinase, root isoform; TrEMBL-Plants: tr|A0A151TLR0|A0A151TLR0_CAJCA Phosphatidylinositol 3-kinase, root isoform; Found in the gene: LotjaGi2g1v0321200 LjG1.1_chr2 79597718 79604424 -
2 domain predictions
1 GO term
LotjaGi2g1v0321200.3
n.a. Phosphatidylinositol 3-kinase; TAIR: AT1G60490.1 vacuolar protein sorting 34; Swiss-Prot: sp|P42347|PI3K1_SOYBN Phosphatidylinositol 3-kinase, root isoform; TrEMBL-Plants: tr|A0A151TLR0|A0A151TLR0_CAJCA Phosphatidylinositol 3-kinase, root isoform; Found in the gene: LotjaGi2g1v0321200 LjG1.1_chr2 79597718 79605165 -
2 domain predictions
1 GO term
LotjaGi2g1v0321200.4
n.a. Phosphatidylinositol 3-kinase; TAIR: AT1G60490.1 vacuolar protein sorting 34; Swiss-Prot: sp|P42347|PI3K1_SOYBN Phosphatidylinositol 3-kinase, root isoform; TrEMBL-Plants: tr|A0A151TLR0|A0A151TLR0_CAJCA Phosphatidylinositol 3-kinase, root isoform; Found in the gene: LotjaGi2g1v0321200 LjG1.1_chr2 79597718 79605165 -
2 domain predictions
1 GO term
LotjaGi2g1v0381400.1
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1; TrEMBL-Plants: tr|V7CI88|V7CI88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0381400 LjG1.1_chr2 87777440 87807436 -
2 domain predictions
1 GO term
LotjaGi2g1v0381400.2
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1; TrEMBL-Plants: tr|V7CI88|V7CI88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0381400 LjG1.1_chr2 87777745 87807507 -
2 domain predictions
1 GO term
LotjaGi2g1v0381400.3
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1; TrEMBL-Plants: tr|V7CI88|V7CI88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0381400 LjG1.1_chr2 87778332 87801640 -
2 domain predictions
1 GO term
LotjaGi2g1v0381400.4
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein; TrEMBL-Plants: tr|V7CI88|V7CI88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0381400 LjG1.1_chr2 87778332 87807005 -
2 domain predictions
1 GO term
LotjaGi2g1v0459200.1
n.a. Serine/threonine-protein kinase; TAIR: AT1G50030.1 target of rapamycin; Swiss-Prot: sp|Q9FR53|TOR_ARATH Serine/threonine-protein kinase TOR; TrEMBL-Plants: tr|I1LFQ6|I1LFQ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0459200 LjG1.1_chr2 95265424 95310480 +
2 domain predictions
1 GO term
LotjaGi2g1v0459200.2
n.a. Serine/threonine-protein kinase; TAIR: AT1G50030.1 target of rapamycin; Swiss-Prot: sp|Q9FR53|TOR_ARATH Serine/threonine-protein kinase TOR; TrEMBL-Plants: tr|A0A0R0LMJ1|A0A0R0LMJ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0459200 LjG1.1_chr2 95265736 95302315 +
2 domain predictions
1 GO term
LotjaGi3g1v0502700.1
n.a. Serine/threonine-protein kinase; TAIR: AT1G50030.1 target of rapamycin; Swiss-Prot: sp|Q8BKX6|SMG1_MOUSE Serine/threonine-protein kinase SMG1; TrEMBL-Plants: tr|K7LPC3|K7LPC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0502700 LjG1.1_chr3 92081007 92097181 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.1
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78531586 78541580 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.11
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78532267 78540304 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.12
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78532267 78540304 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.13
n.a. Phosphatidylinositol 4-kinase; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|I1KTP1|I1KTP1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78535583 78540304 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.4
n.a. Phosphatidylinositol 4-kinase, putative; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78532267 78539739 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.5
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78532267 78540304 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.6
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78532267 78540304 +
2 domain predictions
1 GO term
LotjaGi4g1v0409200.7
n.a. Phosphatidylinositol 4-kinase family protein; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|A0A0B2RP37|A0A0B2RP37_GLYSO Phosphatidylinositol 4-kinase beta 1; Found in the gene: LotjaGi4g1v0409200 LjG1.1_chr4 78532267 78540304 +
2 domain predictions
1 GO term
LotjaGi4g1v0421000.2
n.a. Dual specificity phosphatase family protein; TAIR: AT5G23720.1 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|A0A072TU75|A0A072TU75_MEDTR Dual specificity phosphatase family protein; Found in the gene: LotjaGi4g1v0421000 LjG1.1_chr4 79614240 79620851 +
2 domain predictions
1 GO term
LotjaGi4g1v0421000.3
n.a. Dual specificity phosphatase family protein; TAIR: AT5G23720.1 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|A0A0B2Q765|A0A0B2Q765_GLYSO Dual specificity protein phosphatase 1; Found in the gene: LotjaGi4g1v0421000 LjG1.1_chr4 79614240 79620851 +
2 domain predictions
1 GO term
LotjaGi4g1v0421000.4
n.a. Dual specificity phosphatase family protein; TAIR: AT5G23720.1 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|K7KS75|K7KS75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421000 LjG1.1_chr4 79614240 79620851 +
2 domain predictions
1 GO term
LotjaGi4g1v0421000.5
n.a. Dual specificity phosphatase family protein; TAIR: AT5G23720.3 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|A0A0B2Q765|A0A0B2Q765_GLYSO Dual specificity protein phosphatase 1; Found in the gene: LotjaGi4g1v0421000 LjG1.1_chr4 79614847 79620295 +
2 domain predictions
1 GO term
LotjaGi5g1v0351400.1
n.a. Serine/threonine-protein kinase; TAIR: AT5G40820.2 Ataxia telangiectasia-mutated and RAD3-like protein; Swiss-Prot: sp|Q9FKS4|ATR_ARATH Serine/threonine-protein kinase ATR; TrEMBL-Plants: tr|A0A0B2RY81|A0A0B2RY81_GLYSO Serine/threonine-protein kinase ATR; Found in the gene: LotjaGi5g1v0351400 LjG1.1_chr5 66723959 66738620 -
2 domain predictions
1 GO term
LotjaGi5g1v0351400.2
n.a. Serine/threonine-protein kinase; TAIR: AT5G40820.2 Ataxia telangiectasia-mutated and RAD3-like protein; Swiss-Prot: sp|Q9FKS4|ATR_ARATH Serine/threonine-protein kinase ATR; TrEMBL-Plants: tr|A0A0B2RY81|A0A0B2RY81_GLYSO Serine/threonine-protein kinase ATR; Found in the gene: LotjaGi5g1v0351400 LjG1.1_chr5 66726302 66737628 -
2 domain predictions
1 GO term
LotjaGi5g1v0351400.3
n.a. Serine/threonine-protein kinase; TAIR: AT5G40820.2 Ataxia telangiectasia-mutated and RAD3-like protein; Swiss-Prot: sp|Q9FKS4|ATR_ARATH Serine/threonine-protein kinase ATR; TrEMBL-Plants: tr|A0A0B2RY81|A0A0B2RY81_GLYSO Serine/threonine-protein kinase ATR; Found in the gene: LotjaGi5g1v0351400 LjG1.1_chr5 66726302 66738502 -
2 domain predictions
1 GO term
LotjaGi6g1v0032900.1
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein; TrEMBL-Plants: tr|A0A1J7GST8|A0A1J7GST8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0032900 LjG1.1_chr6 6153569 6185599 -
2 domain predictions
1 GO term
LotjaGi6g1v0032900.2
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein; TrEMBL-Plants: tr|A0A1J7GST8|A0A1J7GST8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0032900 LjG1.1_chr6 6153583 6192634 -
2 domain predictions
1 GO term
LotjaGi6g1v0032900.3
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein; TrEMBL-Plants: tr|A0A1J7GST8|A0A1J7GST8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0032900 LjG1.1_chr6 6153915 6182288 -
2 domain predictions
1 GO term
LotjaGi6g1v0032900.4
n.a. Transcription-associated protein 1; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein; TrEMBL-Plants: tr|A0A1J7GST8|A0A1J7GST8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0032900 LjG1.1_chr6 6153915 6192634 -
2 domain predictions
1 GO term