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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0421000 |
| Transcript ID | LotjaGi4g1v0421000.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dual specificity phosphatase family protein; TAIR: AT5G23720.3 dual specificity protein phosphatase family protein; Swiss-Prot: sp|Q75QN6|DPHS1_ARATH Dual specificity protein phosphatase PHS1; TrEMBL-Plants: tr|A0A0B2Q765|A0A0B2Q765_GLYSO Dual specificity protein phosphatase 1; Found in the gene: LotjaGi4g1v0421000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79614847..79620295) extracted from Lotus japonicus Gifu genome v1.2.
CAACATCTTTGCATGTGGGAGTTGGCATTTCAGGGCAAAGGCCAAGACAGGGAATTGGAACTGGAAAGTGACGAGGGTGA GGCTGAGATTGAGGTTCCATTGCCTCTCACAGCAACTTCTCGGGTCTGTTAACTTCTTTCTTTTTTTATACATTTCCAAT TTATATGGCATTTTGAAACTGCAAGTGCAGAGTTAGAAGCTTTTTGGCGTTGTTTGGAGAATGGGGATTGATGATAGAAG TTCTAAGTTGGAAGCTTTTTGACATTGTTTGGGGAATTTGGGAACTGGGTAATGCAGGTTTTGTATATGTTGGGAGATAT CACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAGACGCACTGCCAAATACCGTTCCTCTGGCT TCCCTCGCCGCCTTTCTATCACCATGTCTTCTAGTTCTTGGTTAGTTACAACTACTTGCCATTCTATTTCATTTCTTGCA ACTGTCATTGGTTCTGTAAATTCTAGTGTGCAAGACATTGTTGGATGCTATAGGTTTGAAGTTTCTTCCTTGGGGAACCA ATAGGGCATGTGAAGTGAGTGTGTAACTGAACATGTTTGGATCACCTAGAAACTGGTCACAAAAGTTTCTCTCCAGAATT GAGAGTGTCTTTGGTTTCCCGTGCGGAAACCAATCAATTCTGGTAGGGTAAAATCAATTATGGATGAGATGAATGTTGAT GTTCGGGAGTCATTTTGGAGAGTTGATTTCAAACTCAAAATCAATTCTGGTAGAAACTAGAGACAGTAGCTTTTTGCGTT GAGAATAATCAATAATGATATTTTACAACTAAACTTCACAACGCTACCCAATAAAAATCACTTTTCCATAATATATCCAA ACATAAAGCACTTCACTTTCAGCTCACTTTTACTATAATCAATTTTTCCAATCAATTGTGACGAAACGTCGATCTAAATA CACACTAATTCTGACTTTTGAATCAATTGTAGAAGGATTTACAAACAATCAATAAGTATGTAAGGCGTTTGTTCAATGCC TTGGCAATTTTTGTCATGGCTTTGAAGTGAGCCTTGTGTCTGTTGCTAATGCTTGTAGTTTGTGCTCAGCATCAGAGAAT CGATTGAGGACTTTAAAGGGGACCTACACCCTGATCAAACAGAGATTAGCCTGTGGGAGAGGCTCGGGAAAGCTGCCATG TTGGATATTGAATCAAGCTCCTTTTCTTGGGACACGCTCTCGTCGCTGCACCACACCGAACACAGCAGTAGCAATGAACA TTCTGAGGATGAAATGTGCAAGCCTCTTGAGGTTCATCATTTTCTATACTCAAATACTCACCATGTACAAGCATTAATAT AATACTTTTTTGTGTAATAAAAGCCTTTACAGTAATCATTTCATGTGTTGTGTTTTCTTTGTCGTACTAAATTATAGAAA AGTAAACATGCATCAATTGTGTATTATTTTCCAAAATTTCTGTCTCAGTTTCCCCTCAGTTTTGTGCACATAGGTAACTG TAAATTCTGGAGGGGTTGTCTTCTTTGCCTTTTTCAATTGCCTTGGGAGTTCTGACACTTTTCCAAAAGAAGCAGCAGCT GTTATAAAGATAGCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGTTATGAATTCGCCAAGTGGTTGGGAGTCCG AACTCCACAGGTTGTTCCCTTTGGTTTTGTAATATAAGTACCGCTTCTTCAAGCTTAGGCTATCCGGCTGTAATTTTACG CTACTACCATATTCATTCTCTTTTGTTATATGGAGTGTGCAGGCTAGAGTCATTCACAATACTAGTCCAGAATGGCAACA AATAAAGGAAGCTGCAGAAAAGGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAAGTGACGTGTTTTGAAC TTTTAGAAGCACTTGAGCTTAGCCGATGTCTCTTTTTTATGAAGTATGATCCAAATCTTATTTTAATGTGATCAGGCTCA TAACATGTCAGCACAGAATACCTTTGCTTGCTTCGCCATATCCAATAACCACCTCTTAAATGAACAAGACATTGCTACTT TGTTGTCTTTTTTTTCATTGAATTTCAATAAGCTCAGTTCAGAACTGTTTGACTGAGCACTGACAAGCCTGAAGTAAATT TTTGGAATATGTTTTTTCTTTCTCATATATGGAAGTTCCATTTCTTCATGTGACAAAGCAAGTGTCATTCTTGATACTTG TGTTTTGTATTTCTTTCCTTGGTCAGTTTCTGAAGCATGCTATGAGGAGTTTCTTGACATCGCTGTTCTCTACAAAATAA ATTTTGATTGTTTGTTCTAAAGATTCCCTTTCTTCTTGCAGTTATGTACATGGTTCACCTTTACTTGACAACTCCAGTGC ATTTGAGTCATGGGAATCTGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTACTGATGCTGGACCTTGTCATCAGAAATG AAGACAGACTCCCTTGCCGGGTGCTTAGATGGCGTGGGAATTGTGCAAATTTGTTGTCGGCCGAAAAGATGATCTCAGCA AATACAGATACTCTAGGATCAGCTTTTGATTCTGCAATTAATCGATACAAACCGAAGTTGATTAAGGCACTTCAAAATGA AAGAAGGTCAACTTCAGTTGATAGCAGACTCAGCTCTCATGATTCTGGCTTGATATCACAAACCTCTGATCTTTCAGAGA TCACAGAATCACCAAGATCCACTGACATAAGCCTTAGACGTCAAACATCAGAAGAATCACTGTCTTCTGCTGACCATAAC ATCGTAGCAATTGATTCCGGTGTTCCCCGGCGACCCCCTGCGGGGAAACGCGCAAATGATCAGGTTAATTACCCTAAGTT GGTTGAGTTGCTGATGAATAGTTCTGGATATGCCTCTAACCTGTTATATGATATAACTGGAGGGAAATTAGGTTGTCCTC CATCAGAAGACATGGATACAACTGATGTACATACAAGTGAAATGAGATCAGTAATCCGTGCATTCAGGACAGGCTTCCGT GATGCTCTTAGAGATCTGCAGGGATTCCATATATTCCTACTCACTCTTCACCAAAGACTAGATACTTTATTACGATCATT TATGAACATTGTAAGCAAAATATCTGCGGGGGAATCTGACAAAGACGATTTTTTGATTCCTGACTCACCTTCACTGGCTC CTGGTGGTTGTTTCTCCTCTCCAACAAGTAAGGAGAGGCTTGCTAATGATAACCATCAGGATTTTACTGACACAGAATCA CATAAAACTGCTTGTAGGGCATCATCTTTGGGTAATAGAGACGGCTATGACTCTACTCCTATGTCAAGAGAAAATTGGCA TGGAAAGTTCTCGAAAGGAAATGGGGAGCCACTTCGTAATCTGCGCCTGACAGCTAAGCTCCGCGACTTCAATAAATTTG CCAAGGTTGGTCTCATAGGTAATAAGACCTTGTTTTCTAGTCATATGATTTCGGTGCTGCTGGGGAGTAATCTGATTTCT TTTTTGGGTGCACTTTTTCCATTTTACATTATGGATATCATAAATAATCAGCCAATTACACATTTCTTTAATATGCAAAT TAACATGACTTAATTGCATGTCTATGCACAAAATTGACTGATGTGGACAATGCTCATGTTTCTGACCATGAGTTCTTTTT GTGTTCTTGAGTAAGAACATGTATTTTTCTGAATCAATTTCCCCCAGTTTTATCCCGGTAATTGGCAAATAAGAATACTA GAGCAATGTTCATGACTTTTATACTGTCTCATGACTTCCAGGTTTTTGATGCTGAATCTAGTAAGGAATTGGAACAGTGG AATGAAATGCTTAAAAATGACGCCGTCAAACTATGCCAGGAGAACAATTTCAATTCAGGATTTTTCGAGGGTAGTGATAA TAACAGTGCTGTTGATGCATATGAACTCAAGGTTATCTTTACTTTGATAGATTCAAAACTAAAGTATTTTAAACTCATTT TATTAATGAGGGATTTTTTATTTATGATGCATGTTCTTCTTAACTCTCAGGTCAGACTAGAGCACATCCTTGAGAGAATT GCATTGATATCCGAAGCTGCAAGTACAGAGAGACCATCTGCTGTTACAAGTAGTCTGTTCATTGGTGGAGCACTGGCGGC AAGATCCGTATACACACTGCAATACTTGGGAATCACGTATATTTTGTGTTTGTGTACCAATGAGATCGGACAATCTGAAT CTCAATTTCCTGATCTATTCGAGTACAAAAATTTCTCAGTAAGTCATATTCACTTGTCTATTTTTCATTTTCATCTTGTT TAATGAGATTTAGATGATCTGAGAATCAGTTGAGCTCGTGCTTGATTAATGTCTCTGCTTTTCCTTGTTAAGTTGTTGCT TTCTCACTGTAATAAGGAATAACTTCTTGTGTTTAAGTTCTTAGGTGCATGTCCATGAATATTTTTTTATTTCCTTAGCT TGATAGTGTATTCTGATACAGCAATATGCTCTCTTGATTAAAAATGGGTTTGCTATTCAATATGACATGTTCTTCTGTGT TTCTATGATATCCTTTTCTAATTTTCTTTCAGGAATTTATTCATATTGGTTTTATTTACAATCCCATTTTAACAGGTGTG TGACAGTGAAGATTTTGACATCAACAACATATTTGAAGAAGCATGTGATTTTATAGATTATGTTGAACAAAAAGGCCAGA GAGTTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGTGTTGCGTTGGTCCTTGCTTACTTAATGCTCAGGAAGTAAGTA AACATGAAAAATTTATAAAAATATTTAGCTATGCAGTCATCAATTAGATGATAAACAATCTAGTTATAATTCACCATCTA GCAATCATAAGTTCACGTTATATGATATTTAAAATTGTTACTCCTAGAGATCCTCTTATGTCACAGGATCATGTCAAGTG AAACATTATGTGTATCTCTTTATGACAATGGAAGAATATGAGAAAGTTTCCACATAAGAGAATCCTGATCCGCTGGTCAG TGAGTGGCATCTTGGACTATTTTTGAACTGAAAACTTTCATGGTGCAGGAAGTATACTTTATTAGAAGCATGGCAGGCTC TGAAACGAGTACACCGGCGAGCGCAGCCCAATGATGGCTTTGCAAAGATCTTACAAGAATTGGATCAGAAACTACATGGG AAGGTTTCAATGGAGTGGCAGCAGAGGAAGCCAACTATGAAAGTTTGTCCGGTCTGCGGAAAAAATGCTGGACTAAGCAG CAGCTCACTCAAGCTGCATCTGCAGAAAGCACACAGAAAGCTGTCATCTGGGAGTGTAGATAGTGCCATGACAATGGAGA TTCAGAAGGCATTAACAGCTTTGAAGATTAGCCGTGGCGGAAGTGTCAGCCCCACACAAAGATCTTCCCACTCCATAATA GATCAATAG
CDS sequence (LotjaGi4g1v0421000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGGAGTTGGCATTTCAGGGCAAAGGCCAAGACAGGGAATTGGAACTGGAAAGTGACGAGGGTGAGGCTGAGATTGA GGTTCCATTGCCTCTCACAGCAACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAGGTTCA CGCAATGGCTCCAATTGGTTCGTAGACGCACTGCCAAATACCGTTCCTCTGGCTTCCCTCGCCGCCTTTCTATCACCTTT GTGCTCAGCATCAGAGAATCGATTGAGGACTTTAAAGGGGACCTACACCCTGATCAAACAGAGATTAGCCTGTGGGAGAG GCTCGGGAAAGCTGCCATGTTGGATATTGAATCAAGCTCCTTTTCTTGGGACACGCTCTCGTCGCTGCACCACACCGAAC ACAGCAGTAGCAATGAACATTCTGAGGATGAAATGTGCAAGCCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTCTTC TTTGCCTTTTTCAATTGCCTTGGGAGTTCTGACACTTTTCCAAAAGAAGCAGCAGCTGTTATAAAGATAGCATCATCAAG AATGGCAACACAGTCTGAACGCCTTGGTTATGAATTCGCCAAGTGGTTGGGAGTCCGAACTCCACAGGCTAGAGTCATTC ACAATACTAGTCCAGAATGGCAACAAATAAAGGAAGCTGCAGAAAAGGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAA ATTGGTGAAGTGACGTGTTTTGAACTTTTAGAAGCACTTGAGCTTAGCCGATGTCTCTTTTTTATGAATTATGTACATGG TTCACCTTTACTTGACAACTCCAGTGCATTTGAGTCATGGGAATCTGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTAC TGATGCTGGACCTTGTCATCAGAAATGAAGACAGACTCCCTTGCCGGGTGCTTAGATGGCGTGGGAATTGTGCAAATTTG TTGTCGGCCGAAAAGATGATCTCAGCAAATACAGATACTCTAGGATCAGCTTTTGATTCTGCAATTAATCGATACAAACC GAAGTTGATTAAGGCACTTCAAAATGAAAGAAGGTCAACTTCAGTTGATAGCAGACTCAGCTCTCATGATTCTGGCTTGA TATCACAAACCTCTGATCTTTCAGAGATCACAGAATCACCAAGATCCACTGACATAAGCCTTAGACGTCAAACATCAGAA GAATCACTGTCTTCTGCTGACCATAACATCGTAGCAATTGATTCCGGTGTTCCCCGGCGACCCCCTGCGGGGAAACGCGC AAATGATCAGGTTAATTACCCTAAGTTGGTTGAGTTGCTGATGAATAGTTCTGGATATGCCTCTAACCTGTTATATGATA TAACTGGAGGGAAATTAGGTTGTCCTCCATCAGAAGACATGGATACAACTGATGTACATACAAGTGAAATGAGATCAGTA ATCCGTGCATTCAGGACAGGCTTCCGTGATGCTCTTAGAGATCTGCAGGGATTCCATATATTCCTACTCACTCTTCACCA AAGACTAGATACTTTATTACGATCATTTATGAACATTGTAAGCAAAATATCTGCGGGGGAATCTGACAAAGACGATTTTT TGATTCCTGACTCACCTTCACTGGCTCCTGGTGGTTGTTTCTCCTCTCCAACAAGTAAGGAGAGGCTTGCTAATGATAAC CATCAGGATTTTACTGACACAGAATCACATAAAACTGCTTGTAGGGCATCATCTTTGGGTAATAGAGACGGCTATGACTC TACTCCTATGTCAAGAGAAAATTGGCATGGAAAGTTCTCGAAAGGAAATGGGGAGCCACTTCGTAATCTGCGCCTGACAG CTAAGCTCCGCGACTTCAATAAATTTGCCAAGGTTTTTGATGCTGAATCTAGTAAGGAATTGGAACAGTGGAATGAAATG CTTAAAAATGACGCCGTCAAACTATGCCAGGAGAACAATTTCAATTCAGGATTTTTCGAGGGTAGTGATAATAACAGTGC TGTTGATGCATATGAACTCAAGGTCAGACTAGAGCACATCCTTGAGAGAATTGCATTGATATCCGAAGCTGCAAGTACAG AGAGACCATCTGCTGTTACAAGTAGTCTGTTCATTGGTGGAGCACTGGCGGCAAGATCCGTATACACACTGCAATACTTG GGAATCACGTATATTTTGTGTTTGTGTACCAATGAGATCGGACAATCTGAATCTCAATTTCCTGATCTATTCGAGTACAA AAATTTCTCAGTGTGTGACAGTGAAGATTTTGACATCAACAACATATTTGAAGAAGCATGTGATTTTATAGATTATGTTG AACAAAAAGGCCAGAGAGTTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGTGTTGCGTTGGTCCTTGCTTACTTAATG CTCAGGAAGAAGTATACTTTATTAGAAGCATGGCAGGCTCTGAAACGAGTACACCGGCGAGCGCAGCCCAATGATGGCTT TGCAAAGATCTTACAAGAATTGGATCAGAAACTACATGGGAAGGTTTCAATGGAGTGGCAGCAGAGGAAGCCAACTATGA AAGTTTGTCCGGTCTGCGGAAAAAATGCTGGACTAAGCAGCAGCTCACTCAAGCTGCATCTGCAGAAAGCACACAGAAAG CTGTCATCTGGGAGTGTAGATAGTGCCATGACAATGGAGATTCAGAAGGCATTAACAGCTTTGAAGATTAGCCGTGGCGG AAGTGTCAGCCCCACACAAAGATCTTCCCACTCCATAATAGATCAATAG
Protein sequence (LotjaGi4g1v0421000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWELAFQGKGQDRELELESDEGEAEIEVPLPLTATSRVLYMLGDITAGPAFRFTQWLQLVRRRTAKYRSSGFPRRLSITF VLSIRESIEDFKGDLHPDQTEISLWERLGKAAMLDIESSSFSWDTLSSLHHTEHSSSNEHSEDEMCKPLEVTVNSGGVVF FAFFNCLGSSDTFPKEAAAVIKIASSRMATQSERLGYEFAKWLGVRTPQARVIHNTSPEWQQIKEAAEKAREAANSEGDE IGEVTCFELLEALELSRCLFFMNYVHGSPLLDNSSAFESWESAERTSEALGRVLMLDLVIRNEDRLPCRVLRWRGNCANL LSAEKMISANTDTLGSAFDSAINRYKPKLIKALQNERRSTSVDSRLSSHDSGLISQTSDLSEITESPRSTDISLRRQTSE ESLSSADHNIVAIDSGVPRRPPAGKRANDQVNYPKLVELLMNSSGYASNLLYDITGGKLGCPPSEDMDTTDVHTSEMRSV IRAFRTGFRDALRDLQGFHIFLLTLHQRLDTLLRSFMNIVSKISAGESDKDDFLIPDSPSLAPGGCFSSPTSKERLANDN HQDFTDTESHKTACRASSLGNRDGYDSTPMSRENWHGKFSKGNGEPLRNLRLTAKLRDFNKFAKVFDAESSKELEQWNEM LKNDAVKLCQENNFNSGFFEGSDNNSAVDAYELKVRLEHILERIALISEAASTERPSAVTSSLFIGGALAARSVYTLQYL GITYILCLCTNEIGQSESQFPDLFEYKNFSVCDSEDFDINNIFEEACDFIDYVEQKGQRVLVHCFEGRSRSVALVLAYLM LRKKYTLLEAWQALKRVHRRAQPNDGFAKILQELDQKLHGKVSMEWQQRKPTMKVCPVCGKNAGLSSSSLKLHLQKAHRK LSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHSIIDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 922 | 918 | 0.0 | ||
| PANTHER | 5 | 922 | 918 | 0.0 | – | |
| SUPERFAMILY | 96 | 430 | 335 | 2.04E-67 | ||
| Pfam | 101 | 416 | 316 | 4.5E-47 | ||
| Gene3D | 271 | 399 | 129 | 1.7E-5 | ||
| MobiDBLite | 360 | 403 | 44 | - | – | |
| MobiDBLite | 562 | 600 | 39 | - | – | |
| MobiDBLite | 571 | 588 | 18 | - | – | |
| Gene3D | 677 | 850 | 174 | 3.2E-40 | ||
| SUPERFAMILY | 695 | 840 | 146 | 1.21E-31 | ||
| SMART | 695 | 837 | 143 | 1.8E-24 | ||
| ProSiteProfiles | 695 | 839 | 145 | 32.069 | ||
| CDD | 696 | 833 | 138 | 4.2572E-48 | – | |
| Pfam | 711 | 836 | 126 | 3.2E-22 | ||
| ProSiteProfiles | 760 | 816 | 57 | 10.871 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphoprotein phosphatase activity | Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Protein tyrosine/serine/threonine phosphatase activity | Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate. | ||
| Biological process | Response to abscisic acid | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Biological process | Dephosphorylation | The process of removing one or more phosphoric (ester or anhydride) residues from a molecule. | ||
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. | ||
| Biological process | Cortical microtubule organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
Expression pattern of LotjaGi4g1v0421000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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