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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0453700 |
| Transcript ID | LotjaGi4g1v0453700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0453700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82566908..82572463) extracted from Lotus japonicus Gifu genome v1.2.
TTTGGAATTGAGTTTTTGAGTTTCCGAAGGCACACTTGTTGTTGTTCTTGTTAATTGCAAAAAACCAGTTCTAGTTTGAT TCCAATGTCTGAGAGCTCATCATCATCTTCTGCTGCTGCTGCTGCTATGGCTCCTCCTCCTAATCCACTAAAATATGATG TGTTTTTGAGCTTCTCAGGGGAAGACACGGGCAAGACCTTCACCAGTCATCTTCATGCTGCACTTCGCAGGAAAAATGTC TTCATAGATGACAGATCACTAGAGACAGGCGATGAGATCTGCAAAGCAATTGAAGCATCCACGATTTACGTCATCGTTTT CTCTGAAAACTATGCTTCTTCCAGGTGCTGTTTGGATGAACTCGTCAAGATTATGGAATGCAAGATGAACTATGACAGGG CTGTCATACCTATTTTCTACCGTGTGGATCCATCAACTGTTAGGCATCAGACAAATAGTTATGGAGATGCGTTTGATGAG CACCAAAACCGGTTAGTACCGGGGGTAGTAATGCAGAGATGGAAGAAAGCTCTGCTTGAAGCTGCTGATCTCTCCGGTTA TCATTCAATCGCCGCCAGGTGACTACTTTTTTAGTTAATTCCACCGTTAATTATGTTTTTTTCTTAATCATCTGATATTC TCATCTAATCAATTTATAAATATGGAAGACTAATGCTTTAGTTACTTTTATTATATGTTCCAGATCAGAATCCATGCTTA TTGATCGTATTGCACAAGATATTTTCAAAAAATTGAATCCTCCTTTCTCTCAAGGAATGCTTGGAATTGACAAGCATATT GCACAAATCCAGTCCTTGTTGCAGCTTGACTCAGAAGCTGTTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGTAA AAGTACATTGGCTGAGGCACTCTATCACAAACTGGGGACCCAATTCAGTTCCAGATGCTTGATTGTGAATGCTCAACAAA AAATAGACAGATATGGAATATACTCTCTACGCAAAAAATACTTATCAAAACTTCTAGGGGAAGATATTCAGTCAAATGGA TTAAATTATGCAATTGAAAGGGTCAAACGGGCAAAGGTTCTCCTTATTCTTGATGACTTGAAAATTTCAATTCCAATTCT AGAATTGATTGGAGGGCATGGAAACTTCGGCCAGGGAAGTAGAATCATTGTGACTAGCAGACACCGGCATGTGCTTAAGA ATGCTGAAGCTGATGAAATATATGAAGTCGAGGGGATGAGTTACCAAGACTCTTTGGAGCTCTTCCGTTTAAATGCCTTT AAGGAAGACTATCCCCTAGAAGGTTATGCGAACTTGATAGTAGAGGTATTAAAATATGCTAAAGGGGTTCCATTAGCTCT ACAAGTTTTAGGCTCACTGCTTTATGATAAAGAAAGGGAAGTATGGGAAAGTGAGTTGAAAAAGTTGAAAGAGCTTCCCA ATGTTGATATTTTTGATGTGCTGAAATTAAGTTATGATGGGCTGGATGATGAACAGAAGGACATATTTCTTGACATTACT TGCTTCTATGCAGGCGATTTTGTGGATAAAGTAGTGGAATTGCTAGATAGTTGTGGTTTCTCTGCTGACATTGGAATGGA TGTCCTCAAAGATAGGGGCCTTATATCTATTTTGGAAGATCGAATCGCGGTGCATGATCTAGTATTGGAAATGGGAAGAG AAATTGTTCGTCAACAATGCGTCAGTGATCCAGGAAAACACAGTCATCTATGGAACCATAAAGAAATTTACCATGTTGTA AGAAAGAACAAGGTATATTCTTCTGCACCTCAACCCCCACTTGATAACTCACACTGTCTCTTGGATTTACTTCTCACTTA CTAGAAAGTACTTAGCAGTTATTAAATTTCCTGCAGTTACATCTTTCCATGTCTATTTATCTATAATTCCTTGCTTTTAC TTCCAGGGGACGGATGCAATCCAGTGTATATTCCTTGACATGTGCCAAATAGAAAAAGTTCAACTACATCCAGAAATTTT CAAAAGCATGCCTAATATAAGAATGCTTTATTTCCATAAGCATTCTTCTTTTAAGCAAGGTCAATCAAATGTGATCGTTC CTGATTTACTTGAAAGTCTTCCGAATGGTTTAAAAGTTCTTCATTGGGATGAATTTCCTCAAAGATCTTTTCCGCTGGAC TTTTGTCCAGAAAAGCTTGTTAAACTTCACATGCGTGAAAGCCGTCTTGAACAACTTTGGGGGGATGATCAGGTACTTCA ATCTTTATGCCATGGTCCTTCAAATTTTAATTATGAATAATCTCTGGTTTTCAATCTCATGACTGTAGAATTGAATGCTA TAAATTAGTAACCCATGCTTTGTATGATAATATAGTACTCTTGTTCACTATGCCATGTATATAGGGTTAAGTTACATTTT TTTTGGTCATCTAATCGTTTTCTCCTTACATCAGGAATTACCAAATTTGGAAAGGCTTGATCTTAGTAATTCTTGGAAAC TGGTTCGAATACCAGACCTTTCCAAGTCCCCGAATATTAAAGAAATAATTCTTTCTGGTTGTAAATCCCTTACAAGACTT CCAATCAATCTTTTTAAGTTGAAATTTCTTGAAAGACTTAATCTGAGTGGTTGCTCAAATGTGGAAAATATCCCTGAAAT CAAGGAGACAATGGAAAATTTAGCGGTGCTTGTCTTAAAACAAACAGCAATACAGGAACTACCTTCATCCTTGAACCATT TGGTGGGGCTTGAAGAATTGAGCTTGAAGTTTTGCTCCAAGCTTGAGAGTATTCCCTCTTCGATTGGAACACTCACCAAA CTCTGCAAATTAGACCTTACCTACTGTGAATCACTTGAAACTTTTCCCGGCAGCATTTTCGATCTGAAGTTGACAAAACT TGATTTGAATGATTGATCAAGGCTAAAGACCTTCCCAGCGATCTTGGAACCTGCAGAAAGTTTTGCTCACATTAGCTTAG CAGAAACAGCAATTAAAAAACTACCTTCATCCCTGCAAAATTTGGTGGGTCTTCAAACCTTGTGTCTGAAGGAGTGCCCT GACCTGGAGTCACTTCCAAACAGCATTTGCAATCTAAAGCTTCTCTCTGAGCTTGACTGTTCAGGCTGTCGTAAATTAAC AGGAATCCCAAATGACATAGGTTGCTTGTCATCATTAAGGACATTGTCACTGCAAGATACCGGAGTTGTGAACCTTCCAG AGAGTATTGCTCATCTTTCAAGCTTGGAATCACTTGATGTAAGTTATTGCAGAAAGCTGGAGTGTATCCCACATCTTCCT CCATTTATGAAACAGTTATTGGCATTTCACTGCCCATCCATTAGAAGCGTGATGTCGAATTCAAGGTTCCTGTCAGATTC CAAAGAGGGTACCTTCGAACTTTACTTCACCAATAATGAAAAACAGGATCCAGGTGCTCAAAGGGATGTTGTCCGCAATG CAGAGCATAGGATCACTGATGTTGCATGTAGGTTTGCGTTCTATTGCTTTCCAGGGAGTGAAGTTCCTAATTGGTTCCAC CATCATTGCAAGAGAAATTCAGTTACTGTGGATAAAGATTCTCTAAATTTGTCCAATGATAATAGGATCATTGGTTTTGC TATGTGTTTTGTTTTGCAACTTGAAGATATGAATTATACAGGATACAGATTTAGTAACTTCAGATGCAGATTAACATTTG AATCTGATGGTCAGACACACATCCTTCCCATCGATGATCAGCTAAACAACTCTTTGCATCAGATCGATCTTCGAGTAGGA CATCTCGTGCGAGATCATACATTTATATGGAACTATTACTTAATGGACTCTGCAAGCAACCACAATGGGATAATTCATGC CCACAACTTCACTTTTGAGATCAGCAATGGGCTGTATCTTAAATCAAGTTCTTTGGTGAAAGAGTGCGGAATATACCCTC TTTATAGAAAAGAAAAAGATGATGATGATGGTAGGTACGTCTAGGAAAGATCACTGTACTGCATTTAAAACTCCTATTGG GAAGGTAAGTTCAGTTTAATTTATTTCTGTCATGTATTTTGGCAATTAGCTTTGTTGTCATTGACTTTGTTTTTTGTTAG TTTGAATACATTTGATACTGTGTTAGTGTTCCTTGCTTTTGTCACTCTGATATAATTATTGACTTAGAGACTGTTTTCTG TAATTTTGAGTAATCTGTTTACTATGCCTGACTCAACACTTCATCATGAGGAAGTGTTTTGGTGTAACCTCCTAGTAGTA ATGAAGCAATAAAGAGTTATATTCATAAACCATAATACAGGATTTGCTTCAACTTGAGTTAAGAGTGCAATTTATTTTAT TACATGTTAGCATGATAGTCTCTGTTATTCCTCTGTCCTGACTCCTGAGACATTTCAATGTGACCTTTCCCTATTAGCTC TGACAAAGTATTTGTGCCTCATTAAGAAATCTCGTGGATCAATTTCATCTCAATTAATCTTTACTTTTGAGTAGCTTCAT TTTTTCACTGAGCAGTTTAAATCCTGTAAAACTTTTAGGATGTGATATTGATTGTCACCCGGAGGATTTTGGGGCCACTA ATCAACTATCAGTAGTTTTTCTTATATAGAATGAAACATATCTTTACCATGTCTATGATTGCGCTTGTATATAGTGGGAA GTGAATTCCCATTGTTAAACATGTTTCTGTTGAAAGTTAATGTCATTTGCCTTTGAAATTTGCAACTTAATTTACCATTA TACTAGTTTTTATTCATTCCGTATTAATTGTATATTTGTCTTTCTGTGGATAGGTTTTCTTGGACCCAAAGGAACGAAAT TACAAAACAACACCGCATAGAAGTTAGAGACTTCTGCAGCAGTGTATAGGAAGCTGACTGGCAAAATGTTGTGTTTGAAT CTCCATGACAGAGGCTTAGTTTCATTTCCTTTGGCATCTTTCAATTTGTTCTAGAGTTGCATATGGTGTATGCTGGTTCA AATTTTGTCCCAATAATTTTCTTTTTTATGCTGGATTTTTTGGTCCGGATTTCTTAAAGTACTAGGCACTGGTTTCATCG TATGATAAGGTTTATTTTTCTATTTAAATTTCATGCTCTTTTATTTTCAAAATTGAAGATAATTCTTTCTGGAAACTTAT CTTTAATCTTTTGCATATAGGCTATCAGGATCAAAACTACATGAGGAATATCAGCAATTTAATCTTTGAAACACTAAGAA ATTCATTATTGGGTGAAATTTATTCGAGAGTCATCAGATTGACTCACTAATTCACTGCTCTCAGTTTCACTTCTCTTTCT TAATCTACATCCTAAACTTTGTTTTCTGCTTCTTGAAGAACATGGATAAATTACTCATTCATGGGGTTTCATAAGTTTCG AGTCTGATATATAATTTCCTATATTCGCACCTTGGAGCTAGCCCCTGCTCCGTAATAAAATGGAAAACATAATCCTTATT TACAAGGATCGTGACATTTATTTATTAAAACATCTATGTTACATCAGGAAATTTTTGGAGGGGTTCTTGACTGTTTTATA CTAGGTATCATGTCTATGTCATGTACAGAAAAGAGA
CDS sequence (LotjaGi4g1v0453700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGAGAGCTCATCATCATCTTCTGCTGCTGCTGCTGCTATGGCTCCTCCTCCTAATCCACTAAAATATGATGTGTT TTTGAGCTTCTCAGGGGAAGACACGGGCAAGACCTTCACCAGTCATCTTCATGCTGCACTTCGCAGGAAAAATGTCTTCA TAGATGACAGATCACTAGAGACAGGCGATGAGATCTGCAAAGCAATTGAAGCATCCACGATTTACGTCATCGTTTTCTCT GAAAACTATGCTTCTTCCAGGTGCTGTTTGGATGAACTCGTCAAGATTATGGAATGCAAGATGAACTATGACAGGGCTGT CATACCTATTTTCTACCGTGTGGATCCATCAACTGTTAGGCATCAGACAAATAGTTATGGAGATGCGTTTGATGAGCACC AAAACCGGTTAGTACCGGGGGTAGTAATGCAGAGATGGAAGAAAGCTCTGCTTGAAGCTGCTGATCTCTCCGGTTATCAT TCAATCGCCGCCAGATCAGAATCCATGCTTATTGATCGTATTGCACAAGATATTTTCAAAAAATTGAATCCTCCTTTCTC TCAAGGAATGCTTGGAATTGACAAGCATATTGCACAAATCCAGTCCTTGTTGCAGCTTGACTCAGAAGCTGTTCGGATCA TAGGAATTTGTGGCATGGGAGGAATAGGTAAAAGTACATTGGCTGAGGCACTCTATCACAAACTGGGGACCCAATTCAGT TCCAGATGCTTGATTGTGAATGCTCAACAAAAAATAGACAGATATGGAATATACTCTCTACGCAAAAAATACTTATCAAA ACTTCTAGGGGAAGATATTCAGTCAAATGGATTAAATTATGCAATTGAAAGGGTCAAACGGGCAAAGGTTCTCCTTATTC TTGATGACTTGAAAATTTCAATTCCAATTCTAGAATTGATTGGAGGGCATGGAAACTTCGGCCAGGGAAGTAGAATCATT GTGACTAGCAGACACCGGCATGTGCTTAAGAATGCTGAAGCTGATGAAATATATGAAGTCGAGGGGATGAGTTACCAAGA CTCTTTGGAGCTCTTCCGTTTAAATGCCTTTAAGGAAGACTATCCCCTAGAAGGTTATGCGAACTTGATAGTAGAGGTAT TAAAATATGCTAAAGGGGTTCCATTAGCTCTACAAGTTTTAGGCTCACTGCTTTATGATAAAGAAAGGGAAGTATGGGAA AGTGAGTTGAAAAAGTTGAAAGAGCTTCCCAATGTTGATATTTTTGATGTGCTGAAATTAAGTTATGATGGGCTGGATGA TGAACAGAAGGACATATTTCTTGACATTACTTGCTTCTATGCAGGCGATTTTGTGGATAAAGTAGTGGAATTGCTAGATA GTTGTGGTTTCTCTGCTGACATTGGAATGGATGTCCTCAAAGATAGGGGCCTTATATCTATTTTGGAAGATCGAATCGCG GTGCATGATCTAGTATTGGAAATGGGAAGAGAAATTGTTCGTCAACAATGCGTCAGTGATCCAGGAAAACACAGTCATCT ATGGAACCATAAAGAAATTTACCATGTTGTAAGAAAGAACAAGGGGACGGATGCAATCCAGTGTATATTCCTTGACATGT GCCAAATAGAAAAAGTTCAACTACATCCAGAAATTTTCAAAAGCATGCCTAATATAAGAATGCTTTATTTCCATAAGCAT TCTTCTTTTAAGCAAGGTCAATCAAATGTGATCGTTCCTGATTTACTTGAAAGTCTTCCGAATGGTTTAAAAGTTCTTCA TTGGGATGAATTTCCTCAAAGATCTTTTCCGCTGGACTTTTGTCCAGAAAAGCTTGTTAAACTTCACATGCGTGAAAGCC GTCTTGAACAACTTTGGGGGGATGATCAGGAATTACCAAATTTGGAAAGGCTTGATCTTAGTAATTCTTGGAAACTGGTT CGAATACCAGACCTTTCCAAGTCCCCGAATATTAAAGAAATAATTCTTTCTGGTTGTAAATCCCTTACAAGACTTCCAAT CAATCTTTTTAAGTTGAAATTTCTTGAAAGACTTAATCTGAGTGGTTGCTCAAATGTGGAAAATATCCCTGAAATCAAGG AGACAATGGAAAATTTAGCGGTGCTTGTCTTAAAACAAACAGCAATACAGGAACTACCTTCATCCTTGAACCATTTGGTG GGGCTTGAAGAATTGAGCTTGAAGTTTTGCTCCAAGCTTGAGAGTATTCCCTCTTCGATTGGAACACTCACCAAACTCTG CAAATTAGACCTTACCTACTGTGAATCACTTGAAACTTTTCCCGGCAGCATTTTCGATCTGAAGTTGACAAAACTTGATT TGAATGATTGA
Protein sequence (LotjaGi4g1v0453700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSESSSSSSAAAAAMAPPPNPLKYDVFLSFSGEDTGKTFTSHLHAALRRKNVFIDDRSLETGDEICKAIEASTIYVIVFS ENYASSRCCLDELVKIMECKMNYDRAVIPIFYRVDPSTVRHQTNSYGDAFDEHQNRLVPGVVMQRWKKALLEAADLSGYH SIAARSESMLIDRIAQDIFKKLNPPFSQGMLGIDKHIAQIQSLLQLDSEAVRIIGICGMGGIGKSTLAEALYHKLGTQFS SRCLIVNAQQKIDRYGIYSLRKKYLSKLLGEDIQSNGLNYAIERVKRAKVLLILDDLKISIPILELIGGHGNFGQGSRII VTSRHRHVLKNAEADEIYEVEGMSYQDSLELFRLNAFKEDYPLEGYANLIVEVLKYAKGVPLALQVLGSLLYDKEREVWE SELKKLKELPNVDIFDVLKLSYDGLDDEQKDIFLDITCFYAGDFVDKVVELLDSCGFSADIGMDVLKDRGLISILEDRIA VHDLVLEMGREIVRQQCVSDPGKHSHLWNHKEIYHVVRKNKGTDAIQCIFLDMCQIEKVQLHPEIFKSMPNIRMLYFHKH SSFKQGQSNVIVPDLLESLPNGLKVLHWDEFPQRSFPLDFCPEKLVKLHMRESRLEQLWGDDQELPNLERLDLSNSWKLV RIPDLSKSPNIKEIILSGCKSLTRLPINLFKLKFLERLNLSGCSNVENIPEIKETMENLAVLVLKQTAIQELPSSLNHLV GLEELSLKFCSKLESIPSSIGTLTKLCKLDLTYCESLETFPGSIFDLKLTKLDLND
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 152 | 152 | 3.9E-42 | ||
| SUPERFAMILY | 19 | 159 | 141 | 2.49E-34 | ||
| ProSiteProfiles | 22 | 156 | 135 | 21.118 | ||
| SMART | 23 | 156 | 134 | 1.6E-41 | ||
| PANTHER | 23 | 689 | 667 | 3.9E-204 | – | |
| Pfam | 23 | 186 | 164 | 9.7E-37 | ||
| PANTHER | 23 | 689 | 667 | 3.9E-204 | – | |
| Gene3D | 168 | 340 | 173 | 2.4E-27 | – | |
| SUPERFAMILY | 176 | 436 | 261 | 4.27E-59 | ||
| Pfam | 195 | 408 | 214 | 2.3E-21 | ||
| SMART | 210 | 344 | 135 | 4.8E-4 | ||
| PRINTS | 213 | 228 | 16 | 7.4E-22 | – | |
| PRINTS | 284 | 298 | 15 | 7.4E-22 | – | |
| Gene3D | 345 | 426 | 82 | 9.4E-6 | – | |
| PRINTS | 377 | 391 | 15 | 7.4E-22 | – | |
| SUPERFAMILY | 413 | 517 | 105 | 2.64E-12 | ||
| Gene3D | 524 | 695 | 172 | 1.7E-21 | ||
| SUPERFAMILY | 526 | 775 | 250 | 1.43E-31 | – | |
| PRINTS | 623 | 639 | 17 | 7.4E-22 | – | |
| Gene3D | 696 | 776 | 81 | 8.8E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0453700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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