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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0010700 |
| Transcript ID | LotjaGi5g1v0010700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P25804|CYSP_PEA Cysteine proteinase 15A; TrEMBL-Plants: tr|I1MC68|I1MC68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0010700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2520218..2523722) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAAAGAACCTTAGACTTACTATTCATTTGATGGAAACATGGCAATAATGAAACCAAAAAAATCCCAAGGTAGGTATT GTCAGTGATGAATGCACTGACAAGTTGCAGAAACGAGAAAACAAGCCTCCATTAATATAAAGGAAACGTGTCCATCTTGC ATTAGCTATATCTATTTTATATTAAAAATATCATTTAAAAAATAACAATAAATTAGTACTAATAATAATTCGAAATTCCA ATATATCTATACTCTATAGTAGTCCTCTTCATCCATTGTTCACTCGCTCAGTTTTCACTTCCCCAATGGATCATCGGAAA CTCTTCGCTATTCTCCTCTTCGCCGCCGTGGCAACCGCCGCGGCAGCCAACCGAATCGACGCCGAGGACCATGACGACGC TCTGATTCGTCAGGTAGTGGACCACGTCCACGACGACCACTTGTTGAACGCGGAGCGCCACTTCACGACGTTCAAGGCGA AGTTCGGGAAGAGCTACGCGACGAGAGAGGAGCATGACTACCGCTTCGGCGTCTTCAAGTCTAACCTCCGGCGGGCGAAG GTGCACGCGAAGCTCGATCCCTCCGCTGAACACGGCGTCACGAAATTCTCCGATCTGACTCCGGCTGAGTTCCGCCGGCA GTTCCTCGGCGTTAAGGCTCTCCGTCTTCCTGCTGACGCTCAGAAGGCTCCCATCCTCCCGACGCGCGACCTCCCTGACG ACTTCGATTGGCGCGATAAAGGTGCCGTCACTCCCGTCAAGGACCAGGCACGTAACATACTATTTCTCTATTATTATTGT TATTATTATTCATGGGTGATTGATTATATTTGAAACAGCTTAATATTTTTTTTAGGGGCAGCTTAATATTTGTGAAACTT ATCAAAATCAACTTATATGTGTAGATATAAATGTTTATTGATAGGTTGGATGACTCAAAAAAGCTTATGAGCTATTTTCA TAAATTTATCTAAATTCTTGTGTAAATAATGTAATGATAATAATTATTATTATTATTTTTATTAATAATGGATGACTATA TTTTGGGATATGATTGTGTGAATAGCTTAATATGTTGATTTCGTAACTAATGTAACTTATTGTAATAATCTCAAATAGTT TATACATAGACAGAAGTGACGAAACTAATCATCTAAGTTTATTATGTAAATAAGTTCAGAAAACTTCTGAATATTTCATA TTTCATATTTCATATTTTATATATGATCTTTGTAACTTTATCTAAGCACTTGTATAAGTGTTTATACTATAAGCATATGA TAAATTCAAATGAACTTGCTCGCTAAGATATGATGTGAATTTTTTTCTTAAGTTAGATTTTCAGTTTATTGTGATTTATT TTGTTGTTTTAATTTCTTAATACATTTTTTTATCTATTATTATGCTCTTTTAATTAGGTAAAAGTAAGGATTAAATTTTC TAAATTTGTACACTTGACCCGTAGAGTATTATTATTATTGATGGTGACTTGATGTTAATTTTCAGTGTCGAATTTTGTTC TTAAGTTTTATGTTTGGGAAGTTTGAATTGGCATGAATGCATGATTAAGTGTTTGGAGTGATTGATGGTGTTCAGGGTGC GTGTGGTTCATGTTGGGCTTTCAGCGCCACTGGAGCATTGGAAGGATCTCACTATCTGACCACTGGTAAGCTAGTGAGCA TTAGTGAGCAACAGCTTGTGGATTGTGATCATGTGGTATGTTTCCTACCTTTCCCTCTGTTTTTATTTACCATTTTGAAG TTGCCTTTAGTATTAAACAAGTAATTTCAATCAAGTTGCTGAATATGGTAAGTCACATGATTCCATCATGTTGCTGTGTA TGTATATTTAGAAATAGAAAGCTTTGAAAACAATTACTATTTTTCAAATGTAAATTTCTCCCTAACTTGTTTAAATGATG ATGATTAGCATGATTTCCCTTGATATCATGATATGTAATGATGAATATTGACGGCTGTGAATCTTTCAGTGTGATCCAGA AGAATATAATTCGTGTGACTCAGGCTGCAATGGTGGGTTGATGAACAATGCATTCGAGTACATACTACAGTCAGGGGGGG TGATGCGAGAAAAGGACTATCCATACACCGGAAGAGATGGCACCTGCAAATTTGACAAGAGTAAAATTGCAGCTTCTGTT GCTAATTTCAGTGTGGTTTCCCTTGATGAAGACCAAATTGCTGCAAATCTAGTGATGAATGGTCCTCTTGCAGGTATGTT CACTGTTAAACAAAAGAATTGACTGTAAGAATTAATTGATAATTTATGATTATAGAATACCGAACTCTGGCTATGTTTGC TGAGGATAGCCGATCCTAAGTTTGGGTAAAGGAGAAACGTTGTGTTAGGATTTCGGCCGCTAACATAAAACTGATCGATG TCTTTAACATAAAAATGATTATAGTACCAAATAAGAATTTGAATAGATTGCATACCTTTTCTAATGTTGATTGCCCATAG AGAAAATGTTCTTATTTGGTCCTTAAAAGATATAAGATCAGTCATTTTAGTCCCTGAAAGGTGAAAATAGGCAAAATAGG TCATGAAAGATGAAAAACGATCAAGTTAACTTAGTTCTTGAAAATAAAAAGGTGATCAATTTTAGCCCCTGAAAACACTA AACTGAATATATTTTCATCTTTCAGAGACTATTGTCTATTTCTGTAGTTGAGTGATGAAATTAACCAATCTTAAATCTCT CATAGACTAAAGTGACTATTCAGTCTACCTCTTACATTGGCTCCCTATCTTGTCCCTTCTCCCTCCACAACGGAATTATA GACATTGTATATCTGTTTTTGCTAAGAACATGACACAGATTGAATGGCAAATTAGAGACAGACTGACTTTTGATCATTTG CTTGGTACAGTTGCTATAAATGCAGTGTATATGCAGACATATGTAGGTGGTGTCTCATGCCCATACATCTGTGGGAAGAA TTTAGATCATGGGGTTCTTCTGGTGGGTTATGGTAAAGCCGGATACGCTCCGATTCGGTTCAAGAACAAGGCTTACTGGA TCATAAAGAATTCATGGGGAGAGAGCTGGGGAGAGAATGGATATTACAAGATCTGCAGGGGTCGGAATGTATGTGGAGTG GATTCCATGGTCTCAACTGTAGCTGCTGCTCATACATCATCTAGCCATTTAATATACAAGGATGCTTTGTTAATTTGCAG TTATGTCATGTGACATTAAGCTATTGGTGTCTATGTAAATATTAATTATAATCTGCTTGTAAAATTGTCTCCACATAAGA TCAGGAAACTGCTATGATCATGTTGTTTATGTAGAAAGTAATTATACATATATGCTTGTTAGTTAGTCCAATGCTGTTAT CCAAAGTTATGGGAACTTGGCAACTTATTGATTTGGAAAACTTCAGTGTGAAGTTTTATTAGCATCCATACTTATACAGC ATATTTTAAAATAAATAGCTTGTGGATCAACTTATTTTCTCCCGGAATCAATTCTGGAATCCAGA
CDS sequence (LotjaGi5g1v0010700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCATCGGAAACTCTTCGCTATTCTCCTCTTCGCCGCCGTGGCAACCGCCGCGGCAGCCAACCGAATCGACGCCGA GGACCATGACGACGCTCTGATTCGTCAGGTAGTGGACCACGTCCACGACGACCACTTGTTGAACGCGGAGCGCCACTTCA CGACGTTCAAGGCGAAGTTCGGGAAGAGCTACGCGACGAGAGAGGAGCATGACTACCGCTTCGGCGTCTTCAAGTCTAAC CTCCGGCGGGCGAAGGTGCACGCGAAGCTCGATCCCTCCGCTGAACACGGCGTCACGAAATTCTCCGATCTGACTCCGGC TGAGTTCCGCCGGCAGTTCCTCGGCGTTAAGGCTCTCCGTCTTCCTGCTGACGCTCAGAAGGCTCCCATCCTCCCGACGC GCGACCTCCCTGACGACTTCGATTGGCGCGATAAAGGTGCCGTCACTCCCGTCAAGGACCAGGGTGCGTGTGGTTCATGT TGGGCTTTCAGCGCCACTGGAGCATTGGAAGGATCTCACTATCTGACCACTGGTAAGCTAGTGAGCATTAGTGAGCAACA GCTTGTGGATTGTGATCATGTGTGTGATCCAGAAGAATATAATTCGTGTGACTCAGGCTGCAATGGTGGGTTGATGAACA ATGCATTCGAGTACATACTACAGTCAGGGGGGGTGATGCGAGAAAAGGACTATCCATACACCGGAAGAGATGGCACCTGC AAATTTGACAAGAGTAAAATTGCAGCTTCTGTTGCTAATTTCAGTGTGGTTTCCCTTGATGAAGACCAAATTGCTGCAAA TCTAGTGATGAATGGTCCTCTTGCAGTTGCTATAAATGCAGTGTATATGCAGACATATGTAGGTGGTGTCTCATGCCCAT ACATCTGTGGGAAGAATTTAGATCATGGGGTTCTTCTGGTGGGTTATGGTAAAGCCGGATACGCTCCGATTCGGTTCAAG AACAAGGCTTACTGGATCATAAAGAATTCATGGGGAGAGAGCTGGGGAGAGAATGGATATTACAAGATCTGCAGGGGTCG GAATGTATGTGGAGTGGATTCCATGGTCTCAACTGTAGCTGCTGCTCATACATCATCTAGCCATTTAATATACAAGGATG CTTTGTTAATTTGCAGTTATGTCATGTGA
Protein sequence (LotjaGi5g1v0010700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHRKLFAILLFAAVATAAAANRIDAEDHDDALIRQVVDHVHDDHLLNAERHFTTFKAKFGKSYATREEHDYRFGVFKSN LRRAKVHAKLDPSAEHGVTKFSDLTPAEFRRQFLGVKALRLPADAQKAPILPTRDLPDDFDWRDKGAVTPVKDQGACGSC WAFSATGALEGSHYLTTGKLVSISEQQLVDCDHVCDPEEYNSCDSGCNGGLMNNAFEYILQSGGVMREKDYPYTGRDGTC KFDKSKIAASVANFSVVSLDEDQIAANLVMNGPLAVAINAVYMQTYVGGVSCPYICGKNLDHGVLLVGYGKAGYAPIRFK NKAYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAHTSSSHLIYKDALLICSYVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 6 | 16 | 11 | - | – | |
| PANTHER | 7 | 361 | 355 | 1.5E-188 | – | |
| PANTHER | 7 | 361 | 355 | 1.5E-188 | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Gene3D | 22 | 360 | 339 | 8.8E-103 | – | |
| Phobius | 22 | 382 | 361 | - | – | |
| SUPERFAMILY | 50 | 359 | 310 | 2.0E-104 | ||
| Pfam | 53 | 109 | 57 | 5.1E-11 | ||
| SMART | 53 | 109 | 57 | 9.1E-21 | ||
| Pfam | 136 | 358 | 223 | 4.5E-75 | ||
| SMART | 136 | 360 | 225 | 1.0E-109 | ||
| CDD | 137 | 359 | 223 | 3.71911E-107 | ||
| PRINTS | 154 | 169 | 16 | 1.4E-10 | ||
| ProSitePatterns | 154 | 165 | 12 | - | ||
| ProSitePatterns | 300 | 310 | 11 | - | ||
| PRINTS | 302 | 312 | 11 | 1.4E-10 | ||
| PRINTS | 324 | 330 | 7 | 1.4E-10 | ||
| ProSitePatterns | 324 | 343 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of LotjaGi5g1v0010700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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